Gene annotation
Transcriptome id Sobic.009G055500.3,Sobic.009G055500.4,Sobic.009G055500.2,Sobic.009G055500.1
Synonym
Functional annotation -
UniProt A0A1B6P721
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G180800 puromycin-sensitive aminopeptidase, putative, expressed K08776: puromycin-sensitive aminopeptidase
2 Sobic.006G132600 - -
3 Sobic.006G079800 OsFBX199 - F-box domain containing protein, expressed -
4 Sobic.010G270200 rhodanese-like domain containing protein, putative, expressed -
5 Sobic.008G054200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@csAtPR5, putative, expressed -
6 Sobic.003G022400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hydrolase, acting on carbon-nitrogen, putative, expressed -
7 Sobic.009G007300 expressed protein -
8 Sobic.003G269400 regulator of chromosome condensation, putative, expressed -
9 Sobic.008G050200 - -
10 Sobic.007G099900 - -
11 Sobic.003G038400 expressed protein -
12 Sobic.006G080700 CSLH1 - cellulose synthase-like family H, expressed -
13 Sobic.004G228300 C2 domain containing protein, putative, expressed -
14 Sobic.002G074800 - -
15 Sobic.003G065201 - -
16 Sobic.009G156800 expressed protein -
17 Sobic.008G009800 OsFBX185 - F-box domain containing protein, expressed -
18 Sobic.004G008200 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
19 Sobic.002G011900 expressed protein -
20 Sobic.004G064200 STE_PAK_Ste20_STLK.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39


Gene co-expression network
sample Sobic009G055500 Sobic009G055500 Sobic002G180800 Sobic002G180800 Sobic009G055500--Sobic002G180800 Sobic006G132600 Sobic006G132600 Sobic009G055500--Sobic006G132600 Sobic006G079800 Sobic006G079800 Sobic009G055500--Sobic006G079800 Sobic010G270200 Sobic010G270200 Sobic009G055500--Sobic010G270200 Sobic008G054200 Sobic008G054200 Sobic009G055500--Sobic008G054200 Sobic003G022400 Sobic003G022400 Sobic009G055500--Sobic003G022400 Sobic009G007300 Sobic009G007300 Sobic009G055500--Sobic009G007300 Sobic003G269400 Sobic003G269400 Sobic009G055500--Sobic003G269400 Sobic008G050200 Sobic008G050200 Sobic009G055500--Sobic008G050200 Sobic004G064200 Sobic004G064200 Sobic002G180800--Sobic004G064200 Sobic006G080700 Sobic006G080700 Sobic002G180800--Sobic006G080700 Sobic010G114200 Sobic010G114200 Sobic002G180800--Sobic010G114200 Sobic002G180800--Sobic008G054200 Sobic002G074800 Sobic002G074800 Sobic002G180800--Sobic002G074800 Sobic002G180800--Sobic009G007300 Sobic003G014200 Sobic003G014200 Sobic002G180800--Sobic003G014200 Sobic002G103800 Sobic002G103800 Sobic002G180800--Sobic002G103800 Sobic003G024400 Sobic003G024400 Sobic002G180800--Sobic003G024400 Sobic006G132600--Sobic002G180800 Sobic006G132600--Sobic010G270200 Sobic010G158000 Sobic010G158000 Sobic006G132600--Sobic010G158000 Sobic003G038400 Sobic003G038400 Sobic006G132600--Sobic003G038400 Sobic004G077300 Sobic004G077300 Sobic006G132600--Sobic004G077300 Sobic006G132600--Sobic009G007300 Sobic006G132600--Sobic009G055500 Sobic006G132600--Sobic006G080700 Sobic006G132600--Sobic008G054200 Sobic010G109800 Sobic010G109800 Sobic006G079800--Sobic010G109800 Sobic001G257200 Sobic001G257200 Sobic006G079800--Sobic001G257200 Sobic001G307500 Sobic001G307500 Sobic006G079800--Sobic001G307500 Sobic005G076800 Sobic005G076800 Sobic006G079800--Sobic005G076800 Sobic001G398200 Sobic001G398200 Sobic006G079800--Sobic001G398200 Sobic001G106800 Sobic001G106800 Sobic006G079800--Sobic001G106800 Sobic006G079800--Sobic003G024400 Sobic009G044700 Sobic009G044700 Sobic006G079800--Sobic009G044700 Sobic006G079800--Sobic002G180800 Sobic010G270200--Sobic009G007300 Sobic010G270200--Sobic006G080700 Sobic004G008200 Sobic004G008200 Sobic010G270200--Sobic004G008200 Sobic010G270200--Sobic002G180800 Sobic010G270200--Sobic006G132600 Sobic004G134900 Sobic004G134900 Sobic010G270200--Sobic004G134900 Sobic006G166400 Sobic006G166400 Sobic010G270200--Sobic006G166400 Sobic001G225800 Sobic001G225800 Sobic010G270200--Sobic001G225800 Sobic001G367301 Sobic001G367301 Sobic010G270200--Sobic001G367301 Sobic008G078200 Sobic008G078200 Sobic008G054200--Sobic008G078200 Sobic008G054200--Sobic004G064200 Sobic008G054200--Sobic003G014200 Sobic004G168200 Sobic004G168200 Sobic008G054200--Sobic004G168200 Sobic009G068400 Sobic009G068400 Sobic008G054200--Sobic009G068400 Sobic007G198900 Sobic007G198900 Sobic008G054200--Sobic007G198900 Sobic008G054200--Sobic002G180800 Sobic004G046700 Sobic004G046700 Sobic008G054200--Sobic004G046700 Sobic001G211700 Sobic001G211700 Sobic008G054200--Sobic001G211700 Sobic008G076100 Sobic008G076100 Sobic003G022400--Sobic008G076100 Sobic007G112500 Sobic007G112500 Sobic003G022400--Sobic007G112500 Sobic004G036400 Sobic004G036400 Sobic003G022400--Sobic004G036400 Sobic008G059700 Sobic008G059700 Sobic003G022400--Sobic008G059700 Sobic010G142401 Sobic010G142401 Sobic003G022400--Sobic010G142401 Sobic003G133000 Sobic003G133000 Sobic003G022400--Sobic003G133000 Sobic005G043300 Sobic005G043300 Sobic003G022400--Sobic005G043300 Sobic007G133800 Sobic007G133800 Sobic003G022400--Sobic007G133800 Sobic005G054401 Sobic005G054401 Sobic003G022400--Sobic005G054401 Sobic009G007300--Sobic006G080700 Sobic009G007300--Sobic001G225800 Sobic009G007300--Sobic008G078200 Sobic009G007300--Sobic004G064200 Sobic009G007300--Sobic009G068400 Sobic009G007300--Sobic007G198900 Sobic010G179600 Sobic010G179600 Sobic009G007300--Sobic010G179600 Sobic002G060000 Sobic002G060000 Sobic009G007300--Sobic002G060000 Sobic009G007300--Sobic010G114200 Sobic006G143900 Sobic006G143900 Sobic003G269400--Sobic006G143900 Sobic003G244400 Sobic003G244400 Sobic003G269400--Sobic003G244400 Sobic001G340800 Sobic001G340800 Sobic003G269400--Sobic001G340800 Sobic001G103100 Sobic001G103100 Sobic003G269400--Sobic001G103100 Sobic010G003200 Sobic010G003200 Sobic003G269400--Sobic010G003200 Sobic004G171100 Sobic004G171100 Sobic003G269400--Sobic004G171100 Sobic001G370400 Sobic001G370400 Sobic003G269400--Sobic001G370400 Sobic002G111100 Sobic002G111100 Sobic003G269400--Sobic002G111100 Sobic006G204400 Sobic006G204400 Sobic003G269400--Sobic006G204400 Sobic009G229400 Sobic009G229400 Sobic008G050200--Sobic009G229400 Sobic005G202901 Sobic005G202901 Sobic008G050200--Sobic005G202901 Sobic010G266600 Sobic010G266600 Sobic008G050200--Sobic010G266600 Sobic007G063800 Sobic007G063800 Sobic008G050200--Sobic007G063800 Sobic008G050200--Sobic006G143900 Sobic004G014200 Sobic004G014200 Sobic008G050200--Sobic004G014200 Sobic002G192800 Sobic002G192800 Sobic008G050200--Sobic002G192800 Sobic008G050200--Sobic006G204400 Sobic008G050200--Sobic010G114200
Octagon: transcription factors


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