Gene annotation
Transcriptome id Sobic.009G097200.1
Synonym
Functional annotation saposin-like type B, region 1 family protein, putative, expressed
UniProt A0A1B6P7V1
Pfam PF03489 PF05184
Panther DB PTHR11480
NCBI CDD -
KEGG Orthology K12382; PSAP, saposin
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT3G51730 : saposin B domain-containing protein
RAP-DB (Rice) LOC_Os05g26954.1 : saposin-like type B, region 1 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a037540
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G181700 calmodulin binding protein, putative, expressed -
2 Sobic.005G075100 rp3 protein, putative, expressed -
3 Sobic.009G097250 - -
4 Sobic.004G181600 calmodulin binding protein, putative, expressed -
5 Sobic.010G256700 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
6 Sobic.001G268200 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.010G239600 RNA polymerase I specific transcription initiation factor RRN3 family protein, putative, expressed K15216: RRN3, RNA polymerase I-specific transcription initiation factor RRN3
8 Sobic.004G317100 DENN domain containing protein, expressed -
9 Sobic.007G193700 Sua5/YciO/YrdC/YwlC family protein, putative, expressed -
10 Sobic.006G225900 expressed protein -
11 Sobic.004G174200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
12 Sobic.006G133900 NIN, putative, expressed -
13 Sobic.001G159400 protein kinase domain containing protein, expressed -
14 Sobic.002G276100 OsLonP4 - Putative Lon protease homologue, expressed K01338: ATP-dependent Lon protease
15 Sobic.003G434900 copine, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
16 Sobic.002G008900 sister chromatid cohesion 2, putative, expressed K06672: SCC2, cohesin loading factor subunit SCC2
17 Sobic.003G086900 C2 domain containing protein, putative, expressed -
18 Sobic.010G112000 expressed protein K17906: autophagy-related protein 2
19 Sobic.006G030400 xa21, putative, expressed -
20 Sobic.002G115050 - -


Gene co-expression network
sample Sobic009G097200 Sobic009G097200 Sobic004G181700 Sobic004G181700 Sobic009G097200--Sobic004G181700 Sobic005G075100 Sobic005G075100 Sobic009G097200--Sobic005G075100 Sobic009G097250 Sobic009G097250 Sobic009G097200--Sobic009G097250 Sobic004G181600 Sobic004G181600 Sobic009G097200--Sobic004G181600 Sobic010G256700 Sobic010G256700 Sobic009G097200--Sobic010G256700 Sobic001G268200 Sobic001G268200 Sobic009G097200--Sobic001G268200 Sobic010G239600 Sobic010G239600 Sobic009G097200--Sobic010G239600 Sobic004G317100 Sobic004G317100 Sobic009G097200--Sobic004G317100 Sobic007G193700 Sobic007G193700 Sobic009G097200--Sobic007G193700 Sobic004G181700--Sobic004G317100 Sobic002G276100 Sobic002G276100 Sobic004G181700--Sobic002G276100 Sobic001G159400 Sobic001G159400 Sobic004G181700--Sobic001G159400 Sobic004G181700--Sobic004G181600 Sobic008G146900 Sobic008G146900 Sobic004G181700--Sobic008G146900 Sobic001G191600 Sobic001G191600 Sobic004G181700--Sobic001G191600 Sobic004G181700--Sobic009G097200 Sobic006G086500 Sobic006G086500 Sobic004G181700--Sobic006G086500 Sobic008G172300 Sobic008G172300 Sobic004G181700--Sobic008G172300 Sobic002G115050 Sobic002G115050 Sobic005G075100--Sobic002G115050 Sobic005G075100--Sobic004G181600 Sobic002G173100 Sobic002G173100 Sobic005G075100--Sobic002G173100 Sobic002G345700 Sobic002G345700 Sobic005G075100--Sobic002G345700 Sobic003G190000 Sobic003G190000 Sobic005G075100--Sobic003G190000 Sobic010G141966 Sobic010G141966 Sobic005G075100--Sobic010G141966 Sobic006G133900 Sobic006G133900 Sobic005G075100--Sobic006G133900 Sobic006G219600 Sobic006G219600 Sobic005G075100--Sobic006G219600 Sobic005G075100--Sobic009G097200 Sobic009G097250--Sobic009G097200 Sobic009G097250--Sobic002G115050 Sobic001G333300 Sobic001G333300 Sobic009G097250--Sobic001G333300 Sobic002G175050 Sobic002G175050 Sobic009G097250--Sobic002G175050 Sobic007G083800 Sobic007G083800 Sobic009G097250--Sobic007G083800 Sobic006G072601 Sobic006G072601 Sobic009G097250--Sobic006G072601 Sobic009G097250--Sobic010G141966 Sobic003G291200 Sobic003G291200 Sobic009G097250--Sobic003G291200 Sobic009G097250--Sobic005G075100 Sobic004G181600--Sobic006G133900 Sobic006G065600 Sobic006G065600 Sobic004G181600--Sobic006G065600 Sobic002G104100 Sobic002G104100 Sobic004G181600--Sobic002G104100 Sobic004G181600--Sobic005G075100 Sobic007G167100 Sobic007G167100 Sobic004G181600--Sobic007G167100 Sobic008G130100 Sobic008G130100 Sobic004G181600--Sobic008G130100 Sobic004G181600--Sobic006G219600 Sobic003G155100 Sobic003G155100 Sobic004G181600--Sobic003G155100 Sobic004G178500 Sobic004G178500 Sobic004G181600--Sobic004G178500 Sobic007G116200 Sobic007G116200 Sobic010G256700--Sobic007G116200 Sobic003G396200 Sobic003G396200 Sobic010G256700--Sobic003G396200 Sobic006G182900 Sobic006G182900 Sobic010G256700--Sobic006G182900 Sobic010G256700--Sobic001G159400 Sobic010G248700 Sobic010G248700 Sobic010G256700--Sobic010G248700 Sobic010G256700--Sobic007G193700 Sobic010G256700--Sobic006G133900 Sobic001G454500 Sobic001G454500 Sobic010G256700--Sobic001G454500 Sobic010G256700--Sobic002G104100 Sobic001G390800 Sobic001G390800 Sobic001G268200--Sobic001G390800 Sobic010G013200 Sobic010G013200 Sobic001G268200--Sobic010G013200 Sobic010G147100 Sobic010G147100 Sobic001G268200--Sobic010G147100 Sobic003G313500 Sobic003G313500 Sobic001G268200--Sobic003G313500 Sobic001G121200 Sobic001G121200 Sobic001G268200--Sobic001G121200 Sobic010G139600 Sobic010G139600 Sobic001G268200--Sobic010G139600 Sobic001G085300 Sobic001G085300 Sobic001G268200--Sobic001G085300 Sobic001G194200 Sobic001G194200 Sobic001G268200--Sobic001G194200 Sobic009G053900 Sobic009G053900 Sobic001G268200--Sobic009G053900 Sobic010G239600--Sobic007G193700 Sobic006G055200 Sobic006G055200 Sobic010G239600--Sobic006G055200 Sobic010G112000 Sobic010G112000 Sobic010G239600--Sobic010G112000 Sobic002G008900 Sobic002G008900 Sobic010G239600--Sobic002G008900 Sobic004G263600 Sobic004G263600 Sobic010G239600--Sobic004G263600 Sobic010G010700 Sobic010G010700 Sobic010G239600--Sobic010G010700 Sobic002G169633 Sobic002G169633 Sobic010G239600--Sobic002G169633 Sobic005G001000 Sobic005G001000 Sobic010G239600--Sobic005G001000 Sobic010G239600--Sobic001G454500 Sobic004G317100--Sobic004G181700 Sobic001G498600 Sobic001G498600 Sobic004G317100--Sobic001G498600 Sobic003G359600 Sobic003G359600 Sobic004G317100--Sobic003G359600 Sobic004G317100--Sobic007G193700 Sobic004G317100--Sobic001G159400 Sobic004G317100--Sobic010G256700 Sobic001G365900 Sobic001G365900 Sobic004G317100--Sobic001G365900 Sobic004G317100--Sobic010G112000 Sobic002G173000 Sobic002G173000 Sobic004G317100--Sobic002G173000 Sobic007G193700--Sobic004G263600 Sobic003G086900 Sobic003G086900 Sobic007G193700--Sobic003G086900 Sobic004G200200 Sobic004G200200 Sobic007G193700--Sobic004G200200 Sobic004G174200 Sobic004G174200 Sobic007G193700--Sobic004G174200 Sobic002G134200 Sobic002G134200 Sobic007G193700--Sobic002G134200 Sobic007G193700--Sobic010G239600 Sobic003G139900 Sobic003G139900 Sobic007G193700--Sobic003G139900 Sobic003G247500 Sobic003G247500 Sobic007G193700--Sobic003G247500 Sobic007G193700--Sobic003G396200
Octagon: transcription factors


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