Gene annotation
Transcriptome id Sobic.009G100200.1
Synonym Sb09g015680
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
wound-induced protein WI12, putative, expressed
UniProt C5YW75
Pfam PF12680
Panther DB PTHR33703 PTHR33703:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G01740 : Nuclear transport factor 2 (NTF2) family protein
RAP-DB (Rice) LOC_Os05g27580.1 : wound-induced protein WI12, putative, expressed
MaizeGDB (Corn) Zm00025a049245 , Zm00025a043483 , Zm00025a052616 , Zm00025a002058
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G403600 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein(PubMedID : 26465154)@Haloacid dehalogenase-like hydrolase (HAD) superfamily protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@rhythmically expressed gene 2 protein, putative, expressed -
2 Sobic.008G026800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BTBN22 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
3 Sobic.002G286400 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
4 Sobic.001G317400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
5 Sobic.005G209400 TKL_IRAK_DUF26-lh.6 - DUF26 kinases have homology to DUF26 containing loci, expressed -
6 Sobic.002G190300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
7 Sobic.010G150800 expressed protein -
8 Sobic.005G171300 expressed protein -
9 Sobic.003G047800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 3, putative, expressed -
10 Sobic.001G073500 5-nucleotidase domain-containing protein, putative, expressed -
11 Sobic.001G463200 BTBN5 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
12 Sobic.001G325700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@GCN5-related N-acetyltransferase, putative, expressed K14682: amino-acid N-acetyltransferase
13 Sobic.007G000900 flap endonuclease, putative, expressed K15338: GEN1, flap endonuclease GEN
14 Sobic.006G064100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
15 Sobic.007G126400 CPuORF27 - conserved peptide uORF-containing transcript, expressed K09338: homeobox-leucine zipper protein
16 Sobic.006G080800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLH1 - cellulose synthase-like family H, expressed -
17 Sobic.001G531500 peroxisomal biogenesis factor 11, putative, expressed -
18 Sobic.002G286300 - -
19 Sobic.002G421900 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@expressed protein -
20 Sobic.006G135600 Up-regulated by silicon application under drought stress (PubMedID : 24813726)@S-adenosyl-l-methionine decarboxylase leader peptide, putative, expressed K01611: speD, S-adenosylmethionine decarboxylase


Gene co-expression network
sample Sobic009G100200 Sobic009G100200 Sobic002G403600 Sobic002G403600 Sobic009G100200--Sobic002G403600 Sobic008G026800 Sobic008G026800 Sobic009G100200--Sobic008G026800 Sobic002G286400 Sobic002G286400 Sobic009G100200--Sobic002G286400 Sobic001G317400 Sobic001G317400 Sobic009G100200--Sobic001G317400 Sobic005G209400 Sobic005G209400 Sobic009G100200--Sobic005G209400 Sobic002G190300 Sobic002G190300 Sobic009G100200--Sobic002G190300 Sobic010G150800 Sobic010G150800 Sobic009G100200--Sobic010G150800 Sobic005G171300 Sobic005G171300 Sobic009G100200--Sobic005G171300 Sobic003G047800 Sobic003G047800 Sobic009G100200--Sobic003G047800 Sobic001G531500 Sobic001G531500 Sobic002G403600--Sobic001G531500 Sobic004G027600 Sobic004G027600 Sobic002G403600--Sobic004G027600 Sobic006G064100 Sobic006G064100 Sobic002G403600--Sobic006G064100 Sobic001G073900 Sobic001G073900 Sobic002G403600--Sobic001G073900 Sobic004G356400 Sobic004G356400 Sobic002G403600--Sobic004G356400 Sobic003G036200 Sobic003G036200 Sobic002G403600--Sobic003G036200 Sobic006G120500 Sobic006G120500 Sobic002G403600--Sobic006G120500 Sobic005G001700 Sobic005G001700 Sobic002G403600--Sobic005G001700 Sobic010G251700 Sobic010G251700 Sobic002G403600--Sobic010G251700 Sobic001G463200 Sobic001G463200 Sobic008G026800--Sobic001G463200 Sobic006G147300 Sobic006G147300 Sobic008G026800--Sobic006G147300 Sobic008G026800--Sobic001G317400 Sobic002G036000 Sobic002G036000 Sobic008G026800--Sobic002G036000 Sobic008G053200 Sobic008G053200 Sobic008G026800--Sobic008G053200 Sobic003G431900 Sobic003G431900 Sobic008G026800--Sobic003G431900 Sobic007G207800 Sobic007G207800 Sobic008G026800--Sobic007G207800 Sobic003G199800 Sobic003G199800 Sobic008G026800--Sobic003G199800 Sobic004G272600 Sobic004G272600 Sobic008G026800--Sobic004G272600 Sobic005G175500 Sobic005G175500 Sobic002G286400--Sobic005G175500 Sobic003G108600 Sobic003G108600 Sobic002G286400--Sobic003G108600 Sobic001G068301 Sobic001G068301 Sobic002G286400--Sobic001G068301 Sobic001G512500 Sobic001G512500 Sobic002G286400--Sobic001G512500 Sobic002G286400--Sobic002G403600 Sobic001G158900 Sobic001G158900 Sobic002G286400--Sobic001G158900 Sobic001G065600 Sobic001G065600 Sobic002G286400--Sobic001G065600 Sobic006G055000 Sobic006G055000 Sobic002G286400--Sobic006G055000 Sobic008G001000 Sobic008G001000 Sobic002G286400--Sobic008G001000 Sobic001G317400--Sobic002G036000 Sobic001G391900 Sobic001G391900 Sobic001G317400--Sobic001G391900 Sobic003G443500 Sobic003G443500 Sobic001G317400--Sobic003G443500 Sobic001G317400--Sobic008G026800 Sobic001G317400--Sobic002G403600 Sobic007G034300 Sobic007G034300 Sobic001G317400--Sobic007G034300 Sobic001G317400--Sobic001G158900 Sobic005G118300 Sobic005G118300 Sobic001G317400--Sobic005G118300 Sobic001G317400--Sobic008G053200 Sobic006G080800 Sobic006G080800 Sobic005G209400--Sobic006G080800 Sobic003G097800 Sobic003G097800 Sobic005G209400--Sobic003G097800 Sobic008G079400 Sobic008G079400 Sobic005G209400--Sobic008G079400 Sobic006G135575 Sobic006G135575 Sobic005G209400--Sobic006G135575 Sobic005G209400--Sobic001G463200 Sobic004G144600 Sobic004G144600 Sobic005G209400--Sobic004G144600 Sobic006G080750 Sobic006G080750 Sobic005G209400--Sobic006G080750 Sobic001G151400 Sobic001G151400 Sobic005G209400--Sobic001G151400 Sobic001G078400 Sobic001G078400 Sobic005G209400--Sobic001G078400 Sobic002G056500 Sobic002G056500 Sobic002G190300--Sobic002G056500 Sobic010G181100 Sobic010G181100 Sobic002G190300--Sobic010G181100 Sobic009G123900 Sobic009G123900 Sobic002G190300--Sobic009G123900 Sobic002G190300--Sobic010G150800 Sobic002G118200 Sobic002G118200 Sobic002G190300--Sobic002G118200 Sobic010G275700 Sobic010G275700 Sobic002G190300--Sobic010G275700 Sobic003G047700 Sobic003G047700 Sobic002G190300--Sobic003G047700 Sobic005G101200 Sobic005G101200 Sobic002G190300--Sobic005G101200 Sobic009G093100 Sobic009G093100 Sobic002G190300--Sobic009G093100 Sobic010G150800--Sobic010G181100 Sobic010G150800--Sobic002G190300 Sobic010G150800--Sobic001G512500 Sobic010G150800--Sobic002G118200 Sobic009G219100 Sobic009G219100 Sobic010G150800--Sobic009G219100 Sobic010G150800--Sobic001G531500 Sobic009G140000 Sobic009G140000 Sobic010G150800--Sobic009G140000 Sobic004G154400 Sobic004G154400 Sobic010G150800--Sobic004G154400 Sobic010G150800--Sobic009G123900 Sobic005G203300 Sobic005G203300 Sobic005G171300--Sobic005G203300 Sobic006G164300 Sobic006G164300 Sobic005G171300--Sobic006G164300 Sobic004G099700 Sobic004G099700 Sobic005G171300--Sobic004G099700 Sobic010G137300 Sobic010G137300 Sobic005G171300--Sobic010G137300 Sobic005G171300--Sobic003G097800 Sobic010G193000 Sobic010G193000 Sobic005G171300--Sobic010G193000 Sobic006G135100 Sobic006G135100 Sobic005G171300--Sobic006G135100 Sobic002G412100 Sobic002G412100 Sobic005G171300--Sobic002G412100 Sobic003G255900 Sobic003G255900 Sobic005G171300--Sobic003G255900 Sobic003G047800--Sobic002G286400 Sobic003G047800--Sobic002G403600 Sobic003G047800--Sobic001G531500 Sobic003G047800--Sobic002G190300 Sobic003G146500 Sobic003G146500 Sobic003G047800--Sobic003G146500 Sobic003G174301 Sobic003G174301 Sobic003G047800--Sobic003G174301 Sobic003G047800--Sobic001G073900 Sobic002G321800 Sobic002G321800 Sobic003G047800--Sobic002G321800 Sobic003G047800--Sobic009G123900
Octagon: transcription factors


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