Gene annotation
Transcriptome id Sobic.009G130900.1
Synonym Sb09g019740,
Functional annotation "oxidoreductase, 2OG-Fe(II) oxygenase family protein" (PubMedID : 26465154)
SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed
UniProt C5YXN1
Pfam -
Panther DB PTHR31447 PTHR31447:SF2
NCBI CDD KOG4176; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G02940 : oxidoreductase, 2OG-Fe(II) oxygenase family protein
RAP-DB (Rice) LOC_Os05g33310.1 : oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a037015 , Zm00025a043640
Brachypodium KQK06349
Barley HORVU1Hr1G061780.9 , HORVU1Hr1G061780.8 , HORVU1Hr1G061780.1 , HORVU1Hr1G061780.3 , HORVU1Hr1G061780.2 , HORVU1Hr1G061780.5 , HORVU1Hr1G061780.4 , HORVU1Hr1G061780.7 , HORVU1Hr1G061780.6 , HORVU1Hr1G061780.10
Wheat TraesCS1B02G262000 , TraesCS1B02G262000 , TraesCS1B02G262000 , TraesCS1D02G250900 , TraesCS1D02G250900 , TraesCS1D02G250900 , TraesCS1A02G251400 , TraesCS1A02G251400 , TraesCS1A02G251400
Populus -


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cDNA sequences
Sobic.009G130900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G119700 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.001G426800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, expressed -
3 Sobic.003G427600 villin protein, putative, expressed -
4 Sobic.003G336100 auxin efflux carrier component, putative, expressed -
5 Sobic.010G185700 calcium-binding mitochondrial carrier CBG00135, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41
6 Sobic.004G124500 transporter family protein, putative, expressed -
7 Sobic.009G183000 - -
8 Sobic.002G387200 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, putative, expressed K12900: FUS-interacting serine-arginine-rich protein 1
9 Sobic.006G264000 WD domain, G-beta repeat domain containing protein, expressed -
10 Sobic.009G069300 actin binding protein family(PubMedID : 26465154)@AR791, putative, expressed -
11 Sobic.009G200800 protein kinase domain containing protein, expressed -
12 Sobic.003G036600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-related transcription activator, putative, expressed -
13 Sobic.009G183101 - -
14 Sobic.009G099200 VHS and GAT domain containing protein, expressed -
15 Sobic.005G087900 non-lysosomal glucosylceramidase, putative, expressed K17108: non-lysosomal glucosylceramidase
16 Sobic.001G128300 chloride channel protein CLC-d, putative, expressed K05016: chloride channel 7
17 Sobic.001G110900 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.003G198200 "similar to Protein phosphatase 2C, expressed in 4 stresses, namely drought, salt, cold and heat"(PubMedID : 29862293)@Negative regulator of ABA(PubMedID : 30367619)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
19 Sobic.003G198150 - -
20 Sobic.002G110300 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@UBX domain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic009G130900 Sobic009G130900 Sobic003G119700 Sobic003G119700 Sobic009G130900--Sobic003G119700 Sobic001G426800 Sobic001G426800 Sobic009G130900--Sobic001G426800 Sobic003G427600 Sobic003G427600 Sobic009G130900--Sobic003G427600 Sobic003G336100 Sobic003G336100 Sobic009G130900--Sobic003G336100 Sobic010G185700 Sobic010G185700 Sobic009G130900--Sobic010G185700 Sobic004G124500 Sobic004G124500 Sobic009G130900--Sobic004G124500 Sobic009G183000 Sobic009G183000 Sobic009G130900--Sobic009G183000 Sobic002G387200 Sobic002G387200 Sobic009G130900--Sobic002G387200 Sobic006G264000 Sobic006G264000 Sobic009G130900--Sobic006G264000 Sobic008G124900 Sobic008G124900 Sobic003G119700--Sobic008G124900 Sobic001G294300 Sobic001G294300 Sobic003G119700--Sobic001G294300 Sobic006G131000 Sobic006G131000 Sobic003G119700--Sobic006G131000 Sobic007G093800 Sobic007G093800 Sobic003G119700--Sobic007G093800 Sobic001G441400 Sobic001G441400 Sobic003G119700--Sobic001G441400 Sobic001G096000 Sobic001G096000 Sobic003G119700--Sobic001G096000 Sobic010G278200 Sobic010G278200 Sobic003G119700--Sobic010G278200 Sobic008G046500 Sobic008G046500 Sobic003G119700--Sobic008G046500 Sobic001G451400 Sobic001G451400 Sobic003G119700--Sobic001G451400 Sobic009G183101 Sobic009G183101 Sobic001G426800--Sobic009G183101 Sobic009G069300 Sobic009G069300 Sobic001G426800--Sobic009G069300 Sobic003G339700 Sobic003G339700 Sobic001G426800--Sobic003G339700 Sobic009G180500 Sobic009G180500 Sobic001G426800--Sobic009G180500 Sobic004G276200 Sobic004G276200 Sobic001G426800--Sobic004G276200 Sobic009G200800 Sobic009G200800 Sobic001G426800--Sobic009G200800 Sobic006G150400 Sobic006G150400 Sobic001G426800--Sobic006G150400 Sobic004G323400 Sobic004G323400 Sobic001G426800--Sobic004G323400 Sobic003G313900 Sobic003G313900 Sobic001G426800--Sobic003G313900 Sobic009G229600 Sobic009G229600 Sobic003G427600--Sobic009G229600 Sobic003G427600--Sobic006G131000 Sobic003G270600 Sobic003G270600 Sobic003G427600--Sobic003G270600 Sobic004G236200 Sobic004G236200 Sobic003G427600--Sobic004G236200 Sobic001G369000 Sobic001G369000 Sobic003G427600--Sobic001G369000 Sobic001G281100 Sobic001G281100 Sobic003G427600--Sobic001G281100 Sobic006G077300 Sobic006G077300 Sobic003G427600--Sobic006G077300 Sobic004G344901 Sobic004G344901 Sobic003G427600--Sobic004G344901 Sobic009G049400 Sobic009G049400 Sobic003G427600--Sobic009G049400 Sobic007G196900 Sobic007G196900 Sobic003G336100--Sobic007G196900 Sobic003G198200 Sobic003G198200 Sobic003G336100--Sobic003G198200 Sobic003G336100--Sobic004G124500 Sobic003G272400 Sobic003G272400 Sobic003G336100--Sobic003G272400 Sobic005G121200 Sobic005G121200 Sobic003G336100--Sobic005G121200 Sobic006G207900 Sobic006G207900 Sobic003G336100--Sobic006G207900 Sobic003G198150 Sobic003G198150 Sobic003G336100--Sobic003G198150 Sobic003G229000 Sobic003G229000 Sobic003G336100--Sobic003G229000 Sobic010G165300 Sobic010G165300 Sobic003G336100--Sobic010G165300 Sobic010G185700--Sobic003G119700 Sobic009G182700 Sobic009G182700 Sobic010G185700--Sobic009G182700 Sobic003G302200 Sobic003G302200 Sobic010G185700--Sobic003G302200 Sobic003G193500 Sobic003G193500 Sobic010G185700--Sobic003G193500 Sobic005G158300 Sobic005G158300 Sobic010G185700--Sobic005G158300 Sobic009G066900 Sobic009G066900 Sobic010G185700--Sobic009G066900 Sobic002G257200 Sobic002G257200 Sobic010G185700--Sobic002G257200 Sobic002G214400 Sobic002G214400 Sobic010G185700--Sobic002G214400 Sobic004G316700 Sobic004G316700 Sobic010G185700--Sobic004G316700 Sobic007G056600 Sobic007G056600 Sobic004G124500--Sobic007G056600 Sobic007G180600 Sobic007G180600 Sobic004G124500--Sobic007G180600 Sobic003G269800 Sobic003G269800 Sobic004G124500--Sobic003G269800 Sobic004G100200 Sobic004G100200 Sobic004G124500--Sobic004G100200 Sobic003G043800 Sobic003G043800 Sobic004G124500--Sobic003G043800 Sobic004G228800 Sobic004G228800 Sobic004G124500--Sobic004G228800 Sobic004G207900 Sobic004G207900 Sobic004G124500--Sobic004G207900 Sobic009G099200 Sobic009G099200 Sobic004G124500--Sobic009G099200 Sobic004G124500--Sobic004G236200 Sobic010G260300 Sobic010G260300 Sobic009G183000--Sobic010G260300 Sobic002G079801 Sobic002G079801 Sobic009G183000--Sobic002G079801 Sobic009G183000--Sobic003G198150 Sobic002G110300 Sobic002G110300 Sobic009G183000--Sobic002G110300 Sobic008G044750 Sobic008G044750 Sobic009G183000--Sobic008G044750 Sobic009G128300 Sobic009G128300 Sobic009G183000--Sobic009G128300 Sobic008G031300 Sobic008G031300 Sobic009G183000--Sobic008G031300 Sobic001G095500 Sobic001G095500 Sobic009G183000--Sobic001G095500 Sobic007G025800 Sobic007G025800 Sobic009G183000--Sobic007G025800 Sobic002G387200--Sobic003G198150 Sobic002G387200--Sobic003G198200 Sobic001G110900 Sobic001G110900 Sobic002G387200--Sobic001G110900 Sobic002G387200--Sobic002G110300 Sobic001G140200 Sobic001G140200 Sobic002G387200--Sobic001G140200 Sobic002G387200--Sobic002G079801 Sobic003G374500 Sobic003G374500 Sobic002G387200--Sobic003G374500 Sobic004G337900 Sobic004G337900 Sobic002G387200--Sobic004G337900 Sobic002G387200--Sobic009G183000 Sobic006G127600 Sobic006G127600 Sobic006G264000--Sobic006G127600 Sobic001G492300 Sobic001G492300 Sobic006G264000--Sobic001G492300 Sobic005G143900 Sobic005G143900 Sobic006G264000--Sobic005G143900 Sobic007G162100 Sobic007G162100 Sobic006G264000--Sobic007G162100 Sobic006G264000--Sobic008G046500 Sobic006G264000--Sobic006G131000 Sobic006G264000--Sobic008G124900 Sobic004G131800 Sobic004G131800 Sobic006G264000--Sobic004G131800 Sobic006G264000--Sobic003G119700
Octagon: transcription factors


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