Gene annotation
Transcriptome id Sobic.009G160700.1
Synonym Sb09g022340
Functional annotation mitochondrial glycoprotein, putative, expressed
UniProt C5YZ74
Pfam PF02330
Panther DB PTHR10826 PTHR10826:SF10
NCBI CDD KOG2536; MAM33, mitochondrial matrix glycoprotein
KEGG Orthology K15414; complement component 1 Q subcomponent-binding protein, mitochondrial
Gene Ontology GO:0005759; mitochondrial matrix


Orthologs (automatic annotation)
TAIR AT2G39795 : Mitochondrial glycoprotein family protein
RAP-DB (Rice) LOC_Os05g38210.1 : mitochondrial glycoprotein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK05940
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G362500 expressed protein -
2 Sobic.009G025700 cycloeucalenol cycloisomerase, putative, expressed K08246: cycloeucalenol cycloisomerase
3 Sobic.009G163100 kinesin motor domain containing protein, putative, expressed K10403: kinesin family member 22
4 Sobic.008G156600 Leucine Rich Repeat family protein, expressed -
5 Sobic.001G322400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@actin-depolymerizing factor, putative, expressed K05765: cofilin
6 Sobic.003G013700 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E
7 Sobic.001G072000 succinate dehydrogenase flavoprotein subunit,mitochondrial precursor, putative, expressed K00234: SDHA, succinate dehydrogenase (ubiquinone) flavoprotein subunit
8 Sobic.003G057050 - -
9 Sobic.009G042000 expressed protein -
10 Sobic.009G214500 IQ calmodulin-binding motif domain containing protein, expressed -
11 Sobic.001G073700 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
12 Sobic.009G220700 - -
13 Sobic.004G241300 kinesin motor domain containing protein, putative, expressed K10395: kinesin family member 4
14 Sobic.004G210300 protease Do-like 14, putative, expressed -
15 Sobic.004G038500 cyclin-related protein, putative, expressed -
16 Sobic.006G050100 expressed protein -
17 Sobic.009G201000 hydrolase, acting on carbon-nitrogen, putative, expressed -
18 Sobic.008G166100 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
19 Sobic.002G167100 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
20 Sobic.004G279200 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase


Gene co-expression network
sample Sobic009G160700 Sobic009G160700 Sobic002G362500 Sobic002G362500 Sobic009G160700--Sobic002G362500 Sobic009G025700 Sobic009G025700 Sobic009G160700--Sobic009G025700 Sobic009G163100 Sobic009G163100 Sobic009G160700--Sobic009G163100 Sobic008G156600 Sobic008G156600 Sobic009G160700--Sobic008G156600 Sobic001G322400 Sobic001G322400 Sobic009G160700--Sobic001G322400 Sobic003G013700 Sobic003G013700 Sobic009G160700--Sobic003G013700 Sobic001G072000 Sobic001G072000 Sobic009G160700--Sobic001G072000 Sobic003G057050 Sobic003G057050 Sobic009G160700--Sobic003G057050 Sobic009G042000 Sobic009G042000 Sobic009G160700--Sobic009G042000 Sobic002G362500--Sobic001G322400 Sobic002G362500--Sobic001G072000 Sobic009G201000 Sobic009G201000 Sobic002G362500--Sobic009G201000 Sobic008G166100 Sobic008G166100 Sobic002G362500--Sobic008G166100 Sobic007G039200 Sobic007G039200 Sobic002G362500--Sobic007G039200 Sobic002G362500--Sobic009G163100 Sobic004G113600 Sobic004G113600 Sobic002G362500--Sobic004G113600 Sobic001G387300 Sobic001G387300 Sobic002G362500--Sobic001G387300 Sobic004G074900 Sobic004G074900 Sobic002G362500--Sobic004G074900 Sobic009G220700 Sobic009G220700 Sobic009G025700--Sobic009G220700 Sobic002G201700 Sobic002G201700 Sobic009G025700--Sobic002G201700 Sobic002G167100 Sobic002G167100 Sobic009G025700--Sobic002G167100 Sobic009G025700--Sobic002G362500 Sobic006G050100 Sobic006G050100 Sobic009G025700--Sobic006G050100 Sobic009G025700--Sobic009G163100 Sobic004G026600 Sobic004G026600 Sobic009G025700--Sobic004G026600 Sobic002G309100 Sobic002G309100 Sobic009G025700--Sobic002G309100 Sobic009G025700--Sobic008G156600 Sobic009G163100--Sobic008G156600 Sobic005G020600 Sobic005G020600 Sobic009G163100--Sobic005G020600 Sobic008G171900 Sobic008G171900 Sobic009G163100--Sobic008G171900 Sobic009G163100--Sobic001G072000 Sobic002G299500 Sobic002G299500 Sobic009G163100--Sobic002G299500 Sobic005G050400 Sobic005G050400 Sobic009G163100--Sobic005G050400 Sobic001G435700 Sobic001G435700 Sobic009G163100--Sobic001G435700 Sobic001G112600 Sobic001G112600 Sobic009G163100--Sobic001G112600 Sobic009G163100--Sobic001G322400 Sobic008G156600--Sobic009G163100 Sobic008G156600--Sobic005G050400 Sobic008G156600--Sobic001G072000 Sobic008G156600--Sobic001G112600 Sobic008G156600--Sobic005G020600 Sobic008G156600--Sobic008G171900 Sobic004G241300 Sobic004G241300 Sobic008G156600--Sobic004G241300 Sobic004G007400 Sobic004G007400 Sobic008G156600--Sobic004G007400 Sobic008G156600--Sobic001G322400 Sobic001G322400--Sobic001G072000 Sobic010G073900 Sobic010G073900 Sobic001G322400--Sobic010G073900 Sobic001G432200 Sobic001G432200 Sobic001G322400--Sobic001G432200 Sobic001G322400--Sobic008G166100 Sobic004G279200 Sobic004G279200 Sobic001G322400--Sobic004G279200 Sobic007G048101 Sobic007G048101 Sobic001G322400--Sobic007G048101 Sobic009G202000 Sobic009G202000 Sobic001G322400--Sobic009G202000 Sobic009G238650 Sobic009G238650 Sobic001G322400--Sobic009G238650 Sobic003G407700 Sobic003G407700 Sobic001G322400--Sobic003G407700 Sobic004G261800 Sobic004G261800 Sobic003G013700--Sobic004G261800 Sobic003G013700--Sobic005G050400 Sobic003G013700--Sobic001G072000 Sobic003G013700--Sobic008G156600 Sobic003G089100 Sobic003G089100 Sobic003G013700--Sobic003G089100 Sobic003G013700--Sobic009G163100 Sobic003G013700--Sobic001G322400 Sobic002G172401 Sobic002G172401 Sobic003G013700--Sobic002G172401 Sobic003G013700--Sobic001G112600 Sobic001G072000--Sobic001G322400 Sobic001G072000--Sobic005G050400 Sobic001G072000--Sobic001G112600 Sobic001G072000--Sobic004G279200 Sobic001G072000--Sobic008G156600 Sobic001G072000--Sobic001G432200 Sobic001G072000--Sobic009G163100 Sobic009G242200 Sobic009G242200 Sobic001G072000--Sobic009G242200 Sobic004G038500 Sobic004G038500 Sobic001G072000--Sobic004G038500 Sobic003G057050--Sobic002G362500 Sobic003G057050--Sobic007G039200 Sobic004G051600 Sobic004G051600 Sobic003G057050--Sobic004G051600 Sobic002G414800 Sobic002G414800 Sobic003G057050--Sobic002G414800 Sobic003G057050--Sobic008G166100 Sobic003G349900 Sobic003G349900 Sobic003G057050--Sobic003G349900 Sobic003G057050--Sobic009G163100 Sobic003G057050--Sobic008G156600 Sobic002G389600 Sobic002G389600 Sobic003G057050--Sobic002G389600 Sobic007G151500 Sobic007G151500 Sobic009G042000--Sobic007G151500 Sobic010G253200 Sobic010G253200 Sobic009G042000--Sobic010G253200 Sobic003G293400 Sobic003G293400 Sobic009G042000--Sobic003G293400 Sobic009G042000--Sobic004G241300 Sobic009G042000--Sobic002G201700 Sobic009G042000--Sobic008G156600 Sobic002G420100 Sobic002G420100 Sobic009G042000--Sobic002G420100 Sobic009G042000--Sobic009G025700 Sobic003G423700 Sobic003G423700 Sobic009G042000--Sobic003G423700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.