Gene annotation
Transcriptome id Sobic.003G057050.1
Synonym -
Functional annotation -
UniProt A0A1W0VVS7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G362500 expressed protein -
2 Sobic.007G039200 MYB family transcription factor, putative, expressed -
3 Sobic.004G051600 EMB2758, putative, expressed -
4 Sobic.002G414800 PPR repeat domain containing protein, putative, expressed -
5 Sobic.008G166100 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
6 Sobic.003G349900 50S ribosomal protein L17, putative, expressed K02879: RP-L17, MRPL17, large subunit ribosomal protein L17
7 Sobic.009G163100 kinesin motor domain containing protein, putative, expressed K10403: kinesin family member 22
8 Sobic.008G156600 Leucine Rich Repeat family protein, expressed -
9 Sobic.002G389600 transcription regulator, putative, expressed -
10 Sobic.004G140400 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
11 Sobic.001G072000 succinate dehydrogenase flavoprotein subunit,mitochondrial precursor, putative, expressed K00234: SDHA, succinate dehydrogenase (ubiquinone) flavoprotein subunit
12 Sobic.004G279200 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
13 Sobic.001G322400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@actin-depolymerizing factor, putative, expressed K05765: cofilin
14 Sobic.001G384200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
15 Sobic.009G201000 hydrolase, acting on carbon-nitrogen, putative, expressed -
16 Sobic.001G387300 exostosin family domain containing protein, expressed -
17 Sobic.004G358000 CAMK_CAMK_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
18 Sobic.004G062200 expressed protein -
19 Sobic.004G189000 - -
20 Sobic.001G112600 Actin(PubMedID : 27325899)@protein and mRNA level correlates with dhurrin amount(PubMedID : 12114576)@actin, putative, expressed K10355: actin, other eukaryote


Gene co-expression network
sample Sobic003G057050 Sobic003G057050 Sobic002G362500 Sobic002G362500 Sobic003G057050--Sobic002G362500 Sobic007G039200 Sobic007G039200 Sobic003G057050--Sobic007G039200 Sobic004G051600 Sobic004G051600 Sobic003G057050--Sobic004G051600 Sobic002G414800 Sobic002G414800 Sobic003G057050--Sobic002G414800 Sobic008G166100 Sobic008G166100 Sobic003G057050--Sobic008G166100 Sobic003G349900 Sobic003G349900 Sobic003G057050--Sobic003G349900 Sobic009G163100 Sobic009G163100 Sobic003G057050--Sobic009G163100 Sobic008G156600 Sobic008G156600 Sobic003G057050--Sobic008G156600 Sobic002G389600 Sobic002G389600 Sobic003G057050--Sobic002G389600 Sobic001G322400 Sobic001G322400 Sobic002G362500--Sobic001G322400 Sobic001G072000 Sobic001G072000 Sobic002G362500--Sobic001G072000 Sobic009G201000 Sobic009G201000 Sobic002G362500--Sobic009G201000 Sobic002G362500--Sobic008G166100 Sobic002G362500--Sobic007G039200 Sobic002G362500--Sobic009G163100 Sobic004G113600 Sobic004G113600 Sobic002G362500--Sobic004G113600 Sobic001G387300 Sobic001G387300 Sobic002G362500--Sobic001G387300 Sobic004G074900 Sobic004G074900 Sobic002G362500--Sobic004G074900 Sobic001G340800 Sobic001G340800 Sobic007G039200--Sobic001G340800 Sobic007G039200--Sobic002G389600 Sobic009G061500 Sobic009G061500 Sobic007G039200--Sobic009G061500 Sobic008G136601 Sobic008G136601 Sobic007G039200--Sobic008G136601 Sobic009G230800 Sobic009G230800 Sobic007G039200--Sobic009G230800 Sobic004G290600 Sobic004G290600 Sobic007G039200--Sobic004G290600 Sobic007G039200--Sobic008G166100 Sobic001G384200 Sobic001G384200 Sobic007G039200--Sobic001G384200 Sobic008G159701 Sobic008G159701 Sobic007G039200--Sobic008G159701 Sobic004G051600--Sobic003G057050 Sobic004G051600--Sobic002G362500 Sobic008G095900 Sobic008G095900 Sobic004G051600--Sobic008G095900 Sobic004G051600--Sobic002G414800 Sobic004G051600--Sobic008G166100 Sobic001G308500 Sobic001G308500 Sobic004G051600--Sobic001G308500 Sobic004G051600--Sobic009G163100 Sobic006G219801 Sobic006G219801 Sobic004G051600--Sobic006G219801 Sobic006G071362 Sobic006G071362 Sobic004G051600--Sobic006G071362 Sobic002G414800--Sobic001G384200 Sobic002G414800--Sobic008G166100 Sobic001G280500 Sobic001G280500 Sobic002G414800--Sobic001G280500 Sobic006G265800 Sobic006G265800 Sobic002G414800--Sobic006G265800 Sobic006G134500 Sobic006G134500 Sobic002G414800--Sobic006G134500 Sobic001G400000 Sobic001G400000 Sobic002G414800--Sobic001G400000 Sobic004G007400 Sobic004G007400 Sobic002G414800--Sobic004G007400 Sobic002G414800--Sobic001G387300 Sobic002G414800--Sobic002G362500 Sobic008G166100--Sobic001G384200 Sobic008G166100--Sobic007G039200 Sobic009G178400 Sobic009G178400 Sobic008G166100--Sobic009G178400 Sobic008G166100--Sobic001G322400 Sobic003G024100 Sobic003G024100 Sobic008G166100--Sobic003G024100 Sobic009G202000 Sobic009G202000 Sobic008G166100--Sobic009G202000 Sobic008G166100--Sobic001G340800 Sobic008G166100--Sobic001G387300 Sobic001G432200 Sobic001G432200 Sobic008G166100--Sobic001G432200 Sobic004G279200 Sobic004G279200 Sobic003G349900--Sobic004G279200 Sobic006G267100 Sobic006G267100 Sobic003G349900--Sobic006G267100 Sobic004G038500 Sobic004G038500 Sobic003G349900--Sobic004G038500 Sobic009G242600 Sobic009G242600 Sobic003G349900--Sobic009G242600 Sobic006G070564 Sobic006G070564 Sobic003G349900--Sobic006G070564 Sobic003G349900--Sobic002G389600 Sobic003G211800 Sobic003G211800 Sobic003G349900--Sobic003G211800 Sobic001G414650 Sobic001G414650 Sobic003G349900--Sobic001G414650 Sobic003G349900--Sobic002G362500 Sobic009G163100--Sobic008G156600 Sobic005G020600 Sobic005G020600 Sobic009G163100--Sobic005G020600 Sobic008G171900 Sobic008G171900 Sobic009G163100--Sobic008G171900 Sobic009G163100--Sobic001G072000 Sobic002G299500 Sobic002G299500 Sobic009G163100--Sobic002G299500 Sobic005G050400 Sobic005G050400 Sobic009G163100--Sobic005G050400 Sobic001G435700 Sobic001G435700 Sobic009G163100--Sobic001G435700 Sobic001G112600 Sobic001G112600 Sobic009G163100--Sobic001G112600 Sobic009G163100--Sobic001G322400 Sobic008G156600--Sobic009G163100 Sobic008G156600--Sobic005G050400 Sobic008G156600--Sobic001G072000 Sobic008G156600--Sobic001G112600 Sobic008G156600--Sobic005G020600 Sobic008G156600--Sobic008G171900 Sobic004G241300 Sobic004G241300 Sobic008G156600--Sobic004G241300 Sobic008G156600--Sobic004G007400 Sobic008G156600--Sobic001G322400 Sobic002G389600--Sobic008G136601 Sobic008G148600 Sobic008G148600 Sobic002G389600--Sobic008G148600 Sobic006G069766 Sobic006G069766 Sobic002G389600--Sobic006G069766 Sobic002G389600--Sobic009G061500 Sobic002G389600--Sobic001G340800 Sobic003G304600 Sobic003G304600 Sobic002G389600--Sobic003G304600 Sobic006G105100 Sobic006G105100 Sobic002G389600--Sobic006G105100 Sobic004G358000 Sobic004G358000 Sobic002G389600--Sobic004G358000 Sobic002G380300 Sobic002G380300 Sobic002G389600--Sobic002G380300
Octagon: transcription factors


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