Gene annotation
Transcriptome id Sobic.009G173100.1
Synonym SbCIPK10, SnRK3.2, CBL-interacting protein kinases, Sb09g023365, CIPK2
Functional annotation Interacting factor of CBLs (PubMedID : 19860013)
CAMK_KIN1/SNF1/Nim1_like.24 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C4P7U4 , C5YZP8
Pfam PF14531 PF03822
Panther DB PTHR24347 PTHR24347:SF222
NCBI CDD KOG0583; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0007165; signal transduction


Orthologs (automatic annotation)
TAIR AT5G07070 : CBL-interacting protein kinase 2
RAP-DB (Rice) LOC_Os05g39870.1 : CAMK_KIN1/SNF1/Nim1_like.24 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a027037 , Zm00025a037607
Brachypodium KQJ92559 , KQJ92560 , KQK05763 , KQK05762
Barley HORVU6Hr1G025940.2 , HORVU1Hr1G070100.11 , HORVU1Hr1G070100.10 , HORVU6Hr1G025940.3 , HORVU1Hr1G070100.9 , HORVU1Hr1G070100.8 , HORVU1Hr1G070100.1 , HORVU1Hr1G070100.3 , HORVU1Hr1G070100.2 , HORVU1Hr1G070100.5 , HORVU1Hr1G070100.4 , HORVU1Hr1G070100.7 , HORVU1Hr1G070100.6
Wheat -
Populus -


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cDNA sequences
Sobic.009G173100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G063200 expressed protein -
2 Sobic.006G166400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ELMO/CED-12 family protein, putative, expressed -
3 Sobic.001G305900 GTP binding protein, putative, expressed -
4 Sobic.003G353700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
5 Sobic.010G160300 RNA recognition motif containing protein, putative, expressed -
6 Sobic.002G147200 esterase/lipase/thioesterase, putative, expressed -
7 Sobic.001G308500 glycosyltransferase family protein 1, putative, expressed -
8 Sobic.002G007800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
9 Sobic.001G424800 myosin heavy chain-related, putative, expressed -
10 Sobic.001G050500 galactosyltransferase family protein, putative, expressed -
11 Sobic.003G306500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsGH3.2 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
12 Sobic.001G384200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
13 Sobic.004G074600 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.009G106700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
15 Sobic.002G304700 RFT1, putative, expressed K06316: oligosaccharide translocation protein RFT1
16 Sobic.006G080700 CSLH1 - cellulose synthase-like family H, expressed -
17 Sobic.004G077300 guanine nucleotide exchange family protein, putative, expressed K18442: ARFGEF, brefeldin A-inhibited guanine nucleotide-exchange protein
18 Sobic.001G367301 - K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
19 Sobic.008G166100 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
20 Sobic.001G149000 FAR1 family protein, expressed -


Gene co-expression network
sample Sobic009G173100 Sobic009G173100 Sobic005G063200 Sobic005G063200 Sobic009G173100--Sobic005G063200 Sobic006G166400 Sobic006G166400 Sobic009G173100--Sobic006G166400 Sobic001G305900 Sobic001G305900 Sobic009G173100--Sobic001G305900 Sobic003G353700 Sobic003G353700 Sobic009G173100--Sobic003G353700 Sobic010G160300 Sobic010G160300 Sobic009G173100--Sobic010G160300 Sobic002G147200 Sobic002G147200 Sobic009G173100--Sobic002G147200 Sobic001G308500 Sobic001G308500 Sobic009G173100--Sobic001G308500 Sobic002G007800 Sobic002G007800 Sobic009G173100--Sobic002G007800 Sobic001G424800 Sobic001G424800 Sobic009G173100--Sobic001G424800 Sobic001G384200 Sobic001G384200 Sobic005G063200--Sobic001G384200 Sobic001G280500 Sobic001G280500 Sobic005G063200--Sobic001G280500 Sobic008G166100 Sobic008G166100 Sobic005G063200--Sobic008G166100 Sobic003G211800 Sobic003G211800 Sobic005G063200--Sobic003G211800 Sobic001G149000 Sobic001G149000 Sobic005G063200--Sobic001G149000 Sobic001G076600 Sobic001G076600 Sobic005G063200--Sobic001G076600 Sobic002G097200 Sobic002G097200 Sobic005G063200--Sobic002G097200 Sobic003G385300 Sobic003G385300 Sobic005G063200--Sobic003G385300 Sobic009G106700 Sobic009G106700 Sobic005G063200--Sobic009G106700 Sobic003G306500 Sobic003G306500 Sobic006G166400--Sobic003G306500 Sobic001G367301 Sobic001G367301 Sobic006G166400--Sobic001G367301 Sobic006G080700 Sobic006G080700 Sobic006G166400--Sobic006G080700 Sobic004G134900 Sobic004G134900 Sobic006G166400--Sobic004G134900 Sobic005G110460 Sobic005G110460 Sobic006G166400--Sobic005G110460 Sobic001G225800 Sobic001G225800 Sobic006G166400--Sobic001G225800 Sobic006G267100 Sobic006G267100 Sobic006G166400--Sobic006G267100 Sobic004G074600 Sobic004G074600 Sobic006G166400--Sobic004G074600 Sobic001G103100 Sobic001G103100 Sobic006G166400--Sobic001G103100 Sobic007G218600 Sobic007G218600 Sobic001G305900--Sobic007G218600 Sobic001G050500 Sobic001G050500 Sobic001G305900--Sobic001G050500 Sobic001G305900--Sobic005G063200 Sobic009G186700 Sobic009G186700 Sobic001G305900--Sobic009G186700 Sobic003G255700 Sobic003G255700 Sobic001G305900--Sobic003G255700 Sobic002G348400 Sobic002G348400 Sobic001G305900--Sobic002G348400 Sobic001G305900--Sobic001G280500 Sobic002G158300 Sobic002G158300 Sobic001G305900--Sobic002G158300 Sobic003G308300 Sobic003G308300 Sobic001G305900--Sobic003G308300 Sobic007G192400 Sobic007G192400 Sobic003G353700--Sobic007G192400 Sobic008G036600 Sobic008G036600 Sobic003G353700--Sobic008G036600 Sobic003G353700--Sobic005G063200 Sobic001G024400 Sobic001G024400 Sobic003G353700--Sobic001G024400 Sobic007G039200 Sobic007G039200 Sobic003G353700--Sobic007G039200 Sobic010G181600 Sobic010G181600 Sobic003G353700--Sobic010G181600 Sobic003G236000 Sobic003G236000 Sobic003G353700--Sobic003G236000 Sobic003G353700--Sobic004G074600 Sobic008G006000 Sobic008G006000 Sobic003G353700--Sobic008G006000 Sobic002G304700 Sobic002G304700 Sobic010G160300--Sobic002G304700 Sobic010G160300--Sobic001G280500 Sobic010G160300--Sobic005G063200 Sobic001G114200 Sobic001G114200 Sobic010G160300--Sobic001G114200 Sobic001G501900 Sobic001G501900 Sobic010G160300--Sobic001G501900 Sobic004G350700 Sobic004G350700 Sobic010G160300--Sobic004G350700 Sobic010G160300--Sobic002G007800 Sobic003G117800 Sobic003G117800 Sobic010G160300--Sobic003G117800 Sobic010G160300--Sobic001G149000 Sobic007G030100 Sobic007G030100 Sobic002G147200--Sobic007G030100 Sobic002G147100 Sobic002G147100 Sobic002G147200--Sobic002G147100 Sobic003G190200 Sobic003G190200 Sobic002G147200--Sobic003G190200 Sobic009G040250 Sobic009G040250 Sobic002G147200--Sobic009G040250 Sobic002G147200--Sobic005G063200 Sobic003G428000 Sobic003G428000 Sobic002G147200--Sobic003G428000 Sobic002G147200--Sobic003G117800 Sobic002G147200--Sobic001G114200 Sobic001G385000 Sobic001G385000 Sobic002G147200--Sobic001G385000 Sobic006G265800 Sobic006G265800 Sobic001G308500--Sobic006G265800 Sobic008G085950 Sobic008G085950 Sobic001G308500--Sobic008G085950 Sobic001G385300 Sobic001G385300 Sobic001G308500--Sobic001G385300 Sobic009G201000 Sobic009G201000 Sobic001G308500--Sobic009G201000 Sobic003G352900 Sobic003G352900 Sobic001G308500--Sobic003G352900 Sobic010G274800 Sobic010G274800 Sobic001G308500--Sobic010G274800 Sobic009G163100 Sobic009G163100 Sobic001G308500--Sobic009G163100 Sobic004G298600 Sobic004G298600 Sobic001G308500--Sobic004G298600 Sobic001G308500--Sobic008G166100 Sobic002G007800--Sobic002G304700 Sobic002G007800--Sobic009G106700 Sobic002G007800--Sobic010G160300 Sobic010G095400 Sobic010G095400 Sobic002G007800--Sobic010G095400 Sobic002G007800--Sobic006G166400 Sobic002G007800--Sobic001G501900 Sobic002G057400 Sobic002G057400 Sobic002G007800--Sobic002G057400 Sobic002G007800--Sobic003G211800 Sobic002G007800--Sobic003G385300 Sobic001G424800--Sobic003G117800 Sobic003G058500 Sobic003G058500 Sobic001G424800--Sobic003G058500 Sobic001G424800--Sobic004G350700 Sobic001G356200 Sobic001G356200 Sobic001G424800--Sobic001G356200 Sobic001G424800--Sobic001G149000 Sobic001G424800--Sobic001G280500 Sobic003G394500 Sobic003G394500 Sobic001G424800--Sobic003G394500 Sobic001G424800--Sobic003G385300 Sobic001G378800 Sobic001G378800 Sobic001G424800--Sobic001G378800
Octagon: transcription factors


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