Gene annotation
Transcriptome id Sobic.009G189400.1
Synonym Sb09g024840, SIR
Functional annotation ferredoxin--nitrite reductase( (PubMedID : 26759170,(PubMedID : 24597475)
ferredoxin--nitrite reductase, putative, expressed
UniProt C5Z0R1
Pfam PF03460 PF01077
Panther DB PTHR11493 PTHR11493:SF48
NCBI CDD -
KEGG Orthology K00392; sulfite reductase (ferredoxin)
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT5G04590 : sulfite reductase
RAP-DB (Rice) LOC_Os05g42350.1 : ferredoxin--nitrite reductase, putative, expressed
MaizeGDB (Corn) Zm00025a044150
Brachypodium PNT75228 , PNT70961 , PNT75227
Barley HORVU0Hr1G026700.5 , HORVU0Hr1G026700.4 , HORVU0Hr1G026700.6 , HORVU0Hr1G026700.1 , HORVU0Hr1G026700.3 , HORVU0Hr1G026700.2 , HORVU2Hr1G007660.1 , HORVU2Hr1G007660.2 , HORVU7Hr1G034450.1 , HORVU6Hr1G071510.4 , HORVU7Hr1G034450.2 , HORVU1Hr1G065770.1 , HORVU1Hr1G065770.2 , HORVU7Hr1G063980.2 , HORVU7Hr1G063980.1 , HORVU7Hr1G034450.4 , HORVU6Hr1G071510.2 , HORVU7Hr1G034450.3 , HORVU6Hr1G071510.3 , HORVU6Hr1G078400.3 , HORVU6Hr1G078400.2 , HORVU6Hr1G078400.1
Wheat TraesCS1D02G324200 , TraesCS1D02G324200 , TraesCS1B02G336300 , TraesCS1A02G323400 , TraesCS1A02G323400
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.009G189400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G094300 bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed K13811: 3'-phosphoadenosine 5'-phosphosulfate synthase
2 Sobic.001G447600 squalene monooxygenase, putative, expressed K00511: SQLE, squalene monooxygenase
3 Sobic.001G148500 expressed protein -
4 Sobic.009G017800 glutathione S-transferase, N-terminal domain containing protein, expressed -
5 Sobic.006G097200 cation transport regulator-like protein 1, putative, expressed -
6 Sobic.009G178200 NADH-cytochrome b5 reductase, putative, expressed K00326: cytochrome-b5 reductase
7 Sobic.002G279700 3-dehydroquinate synthase, putative, expressed K01735: 3-dehydroquinate synthase
8 Sobic.009G015700 actin-depolymerizing factor, putative, expressed K05765: cofilin
9 Sobic.010G026925 - K01689: ENO, enolase
10 Sobic.001G071800 glucose-6-phosphate isomerase, putative, expressed K01810: GPI, glucose-6-phosphate isomerase
11 Sobic.004G130100 ubiquitin-conjugating enzyme, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant
12 Sobic.010G024100 tRNA 2-phosphotransferase 1, putative, expressed K10669: TRPT1, 2'-phosphotransferase
13 Sobic.002G301400 expressed protein -
14 Sobic.009G190000 tetratricopeptide repeat domain containing protein, expressed -
15 Sobic.007G069200 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
16 Sobic.002G390300 heat shock protein DnaJ, putative, expressed -
17 Sobic.001G388600 histidine triad family protein, putative, expressed K02503: HINT1, hinT, histidine triad (HIT) family protein
18 Sobic.003G380600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrion protein, putative, expressed -
19 Sobic.004G352500 vacuolar ATP synthase subunit F, putative, expressed K02151: ATPeV1F, V-type H+-transporting ATPase subunit F
20 Sobic.005G033200 expressed protein -


Gene co-expression network
sample Sobic009G189400 Sobic009G189400 Sobic001G094300 Sobic001G094300 Sobic009G189400--Sobic001G094300 Sobic001G447600 Sobic001G447600 Sobic009G189400--Sobic001G447600 Sobic001G148500 Sobic001G148500 Sobic009G189400--Sobic001G148500 Sobic009G017800 Sobic009G017800 Sobic009G189400--Sobic009G017800 Sobic006G097200 Sobic006G097200 Sobic009G189400--Sobic006G097200 Sobic009G178200 Sobic009G178200 Sobic009G189400--Sobic009G178200 Sobic002G279700 Sobic002G279700 Sobic009G189400--Sobic002G279700 Sobic009G015700 Sobic009G015700 Sobic009G189400--Sobic009G015700 Sobic010G026925 Sobic010G026925 Sobic009G189400--Sobic010G026925 Sobic001G094300--Sobic009G189400 Sobic001G094300--Sobic009G017800 Sobic002G390300 Sobic002G390300 Sobic001G094300--Sobic002G390300 Sobic003G340800 Sobic003G340800 Sobic001G094300--Sobic003G340800 Sobic001G094300--Sobic009G178200 Sobic001G131400 Sobic001G131400 Sobic001G094300--Sobic001G131400 Sobic010G019900 Sobic010G019900 Sobic001G094300--Sobic010G019900 Sobic009G190000 Sobic009G190000 Sobic001G094300--Sobic009G190000 Sobic001G012500 Sobic001G012500 Sobic001G094300--Sobic001G012500 Sobic007G069200 Sobic007G069200 Sobic001G447600--Sobic007G069200 Sobic003G216500 Sobic003G216500 Sobic001G447600--Sobic003G216500 Sobic003G384300 Sobic003G384300 Sobic001G447600--Sobic003G384300 Sobic003G244200 Sobic003G244200 Sobic001G447600--Sobic003G244200 Sobic001G447600--Sobic002G279700 Sobic005G004500 Sobic005G004500 Sobic001G447600--Sobic005G004500 Sobic010G024100 Sobic010G024100 Sobic001G447600--Sobic010G024100 Sobic001G447600--Sobic009G017800 Sobic005G133900 Sobic005G133900 Sobic001G447600--Sobic005G133900 Sobic004G210800 Sobic004G210800 Sobic001G148500--Sobic004G210800 Sobic008G156700 Sobic008G156700 Sobic001G148500--Sobic008G156700 Sobic004G275600 Sobic004G275600 Sobic001G148500--Sobic004G275600 Sobic003G440800 Sobic003G440800 Sobic001G148500--Sobic003G440800 Sobic001G468600 Sobic001G468600 Sobic001G148500--Sobic001G468600 Sobic002G111200 Sobic002G111200 Sobic001G148500--Sobic002G111200 Sobic009G243100 Sobic009G243100 Sobic001G148500--Sobic009G243100 Sobic008G087900 Sobic008G087900 Sobic001G148500--Sobic008G087900 Sobic008G032600 Sobic008G032600 Sobic001G148500--Sobic008G032600 Sobic009G017800--Sobic009G015700 Sobic001G301800 Sobic001G301800 Sobic009G017800--Sobic001G301800 Sobic001G496300 Sobic001G496300 Sobic009G017800--Sobic001G496300 Sobic001G020100 Sobic001G020100 Sobic009G017800--Sobic001G020100 Sobic009G017800--Sobic001G447600 Sobic009G017800--Sobic006G097200 Sobic003G380600 Sobic003G380600 Sobic009G017800--Sobic003G380600 Sobic009G017800--Sobic010G026925 Sobic001G407600 Sobic001G407600 Sobic009G017800--Sobic001G407600 Sobic006G097200--Sobic002G279700 Sobic010G153900 Sobic010G153900 Sobic006G097200--Sobic010G153900 Sobic010G023700 Sobic010G023700 Sobic006G097200--Sobic010G023700 Sobic006G097200--Sobic001G020100 Sobic002G226400 Sobic002G226400 Sobic006G097200--Sobic002G226400 Sobic002G421300 Sobic002G421300 Sobic006G097200--Sobic002G421300 Sobic001G129000 Sobic001G129000 Sobic006G097200--Sobic001G129000 Sobic008G188600 Sobic008G188600 Sobic006G097200--Sobic008G188600 Sobic007G140800 Sobic007G140800 Sobic006G097200--Sobic007G140800 Sobic009G178200--Sobic010G024100 Sobic009G178200--Sobic003G216500 Sobic008G118600 Sobic008G118600 Sobic009G178200--Sobic008G118600 Sobic005G055000 Sobic005G055000 Sobic009G178200--Sobic005G055000 Sobic007G171950 Sobic007G171950 Sobic009G178200--Sobic007G171950 Sobic004G028000 Sobic004G028000 Sobic009G178200--Sobic004G028000 Sobic004G182500 Sobic004G182500 Sobic009G178200--Sobic004G182500 Sobic001G463500 Sobic001G463500 Sobic009G178200--Sobic001G463500 Sobic007G061400 Sobic007G061400 Sobic009G178200--Sobic007G061400 Sobic002G128900 Sobic002G128900 Sobic002G279700--Sobic002G128900 Sobic006G261700 Sobic006G261700 Sobic002G279700--Sobic006G261700 Sobic001G295300 Sobic001G295300 Sobic002G279700--Sobic001G295300 Sobic002G200900 Sobic002G200900 Sobic002G279700--Sobic002G200900 Sobic002G233700 Sobic002G233700 Sobic002G279700--Sobic002G233700 Sobic002G279700--Sobic008G188600 Sobic002G279700--Sobic001G020100 Sobic008G006200 Sobic008G006200 Sobic002G279700--Sobic008G006200 Sobic004G307400 Sobic004G307400 Sobic002G279700--Sobic004G307400 Sobic009G015700--Sobic009G017800 Sobic007G122200 Sobic007G122200 Sobic009G015700--Sobic007G122200 Sobic003G402600 Sobic003G402600 Sobic009G015700--Sobic003G402600 Sobic009G015700--Sobic001G407600 Sobic001G526600 Sobic001G526600 Sobic009G015700--Sobic001G526600 Sobic005G026100 Sobic005G026100 Sobic009G015700--Sobic005G026100 Sobic003G238000 Sobic003G238000 Sobic009G015700--Sobic003G238000 Sobic002G291200 Sobic002G291200 Sobic009G015700--Sobic002G291200 Sobic002G363100 Sobic002G363100 Sobic009G015700--Sobic002G363100 Sobic003G336000 Sobic003G336000 Sobic010G026925--Sobic003G336000 Sobic005G033200 Sobic005G033200 Sobic010G026925--Sobic005G033200 Sobic006G276700 Sobic006G276700 Sobic010G026925--Sobic006G276700 Sobic010G026925--Sobic001G301800 Sobic001G290700 Sobic001G290700 Sobic010G026925--Sobic001G290700 Sobic006G178000 Sobic006G178000 Sobic010G026925--Sobic006G178000 Sobic010G026925--Sobic003G216500 Sobic010G027000 Sobic010G027000 Sobic010G026925--Sobic010G027000 Sobic010G026925--Sobic009G017800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.