Gene annotation
Transcriptome id Sobic.001G094300.1
Synonym Sb01g008450, APS3
Functional annotation bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed
UniProt C5X183
Pfam PF14306 PF01747
Panther DB PTHR11055 PTHR11055:SF18
NCBI CDD -
KEGG Orthology K13811; 3'-phosphoadenosine 5'-phosphosulfate synthase
Gene Ontology GO:0004781; sulfate adenylyltransferase (ATP) activity


Orthologs (automatic annotation)
TAIR AT4G14680 : Pseudouridine synthase/archaeosine transglycosylase-like family protein
RAP-DB (Rice) LOC_Os03g53230.1 : bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed
MaizeGDB (Corn) Zm00025a016829 , Zm00025a026784 , Zm00025a008103 , Zm00025a028327 , Zm00025a007125
Brachypodium KQK13269
Barley HORVU5Hr1G094300.3 , HORVU5Hr1G094300.2 , HORVU5Hr1G094300.1 , HORVU5Hr1G094300.4
Wheat TraesCS5B02G387300 , TraesCS5D02G392300 , TraesCS5A02G382900
Populus -


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cDNA sequences
Sobic.001G094300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G189400 ferredoxin--nitrite reductase("PubMedID : 26759170,PubMedID : 24597475")@ferredoxin--nitrite reductase, putative, expressed K00392: sulfite reductase (ferredoxin)
2 Sobic.009G017800 glutathione S-transferase, N-terminal domain containing protein, expressed -
3 Sobic.002G390300 heat shock protein DnaJ, putative, expressed -
4 Sobic.003G340800 transmembrane amino acid transporter protein, putative, expressed -
5 Sobic.009G178200 NADH-cytochrome b5 reductase, putative, expressed K00326: cytochrome-b5 reductase
6 Sobic.001G131400 thioesterase family protein, putative, expressed -
7 Sobic.010G019900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
8 Sobic.009G190000 tetratricopeptide repeat domain containing protein, expressed -
9 Sobic.001G012500 similar to Glutathione S transferase 1(PubMedID : 24655390)@"Glutathione S transferase 1, up-regulated under all the stress condition"(PubMedID : 24655390)@similar to Glutathione S transferase 1(PubMedID : 24655390)@Glutathione S transferase 1(PubMedID : 24655390)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
10 Sobic.001G357300 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
11 Sobic.010G074600 expressed protein -
12 Sobic.007G052700 acyl CoA binding protein, putative, expressed K08762: DBI, diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein)
13 Sobic.001G173500 - -
14 Sobic.001G388600 histidine triad family protein, putative, expressed K02503: HINT1, hinT, histidine triad (HIT) family protein
15 Sobic.003G279200 ubiquinone oxidoreductase, putative, expressed K03940: NADH dehydrogenase (ubiquinone) Fe-S protein 7
16 Sobic.001G012600 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
17 Sobic.001G352200 heavy metal-associated domain containing protein, expressed -
18 Sobic.007G069200 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
19 Sobic.004G028200 UP-9A, putative, expressed -
20 Sobic.002G279700 3-dehydroquinate synthase, putative, expressed K01735: 3-dehydroquinate synthase


Gene co-expression network
sample Sobic001G094300 Sobic001G094300 Sobic009G189400 Sobic009G189400 Sobic001G094300--Sobic009G189400 Sobic009G017800 Sobic009G017800 Sobic001G094300--Sobic009G017800 Sobic002G390300 Sobic002G390300 Sobic001G094300--Sobic002G390300 Sobic003G340800 Sobic003G340800 Sobic001G094300--Sobic003G340800 Sobic009G178200 Sobic009G178200 Sobic001G094300--Sobic009G178200 Sobic001G131400 Sobic001G131400 Sobic001G094300--Sobic001G131400 Sobic010G019900 Sobic010G019900 Sobic001G094300--Sobic010G019900 Sobic009G190000 Sobic009G190000 Sobic001G094300--Sobic009G190000 Sobic001G012500 Sobic001G012500 Sobic001G094300--Sobic001G012500 Sobic009G189400--Sobic001G094300 Sobic001G447600 Sobic001G447600 Sobic009G189400--Sobic001G447600 Sobic001G148500 Sobic001G148500 Sobic009G189400--Sobic001G148500 Sobic009G189400--Sobic009G017800 Sobic006G097200 Sobic006G097200 Sobic009G189400--Sobic006G097200 Sobic009G189400--Sobic009G178200 Sobic002G279700 Sobic002G279700 Sobic009G189400--Sobic002G279700 Sobic009G015700 Sobic009G015700 Sobic009G189400--Sobic009G015700 Sobic010G026925 Sobic010G026925 Sobic009G189400--Sobic010G026925 Sobic009G017800--Sobic009G015700 Sobic001G301800 Sobic001G301800 Sobic009G017800--Sobic001G301800 Sobic001G496300 Sobic001G496300 Sobic009G017800--Sobic001G496300 Sobic001G020100 Sobic001G020100 Sobic009G017800--Sobic001G020100 Sobic009G017800--Sobic001G447600 Sobic009G017800--Sobic006G097200 Sobic003G380600 Sobic003G380600 Sobic009G017800--Sobic003G380600 Sobic009G017800--Sobic010G026925 Sobic001G407600 Sobic001G407600 Sobic009G017800--Sobic001G407600 Sobic010G024100 Sobic010G024100 Sobic002G390300--Sobic010G024100 Sobic003G327100 Sobic003G327100 Sobic002G390300--Sobic003G327100 Sobic004G023900 Sobic004G023900 Sobic002G390300--Sobic004G023900 Sobic007G171950 Sobic007G171950 Sobic002G390300--Sobic007G171950 Sobic003G190500 Sobic003G190500 Sobic002G390300--Sobic003G190500 Sobic006G198500 Sobic006G198500 Sobic002G390300--Sobic006G198500 Sobic001G479200 Sobic001G479200 Sobic002G390300--Sobic001G479200 Sobic001G526600 Sobic001G526600 Sobic002G390300--Sobic001G526600 Sobic001G439600 Sobic001G439600 Sobic002G390300--Sobic001G439600 Sobic006G201400 Sobic006G201400 Sobic003G340800--Sobic006G201400 Sobic003G340800--Sobic001G012500 Sobic003G031900 Sobic003G031900 Sobic003G340800--Sobic003G031900 Sobic004G099900 Sobic004G099900 Sobic003G340800--Sobic004G099900 Sobic006G074300 Sobic006G074300 Sobic003G340800--Sobic006G074300 Sobic001G012600 Sobic001G012600 Sobic003G340800--Sobic001G012600 Sobic002G379600 Sobic002G379600 Sobic003G340800--Sobic002G379600 Sobic001G366100 Sobic001G366100 Sobic003G340800--Sobic001G366100 Sobic005G116500 Sobic005G116500 Sobic003G340800--Sobic005G116500 Sobic009G178200--Sobic010G024100 Sobic003G216500 Sobic003G216500 Sobic009G178200--Sobic003G216500 Sobic008G118600 Sobic008G118600 Sobic009G178200--Sobic008G118600 Sobic005G055000 Sobic005G055000 Sobic009G178200--Sobic005G055000 Sobic009G178200--Sobic007G171950 Sobic004G028000 Sobic004G028000 Sobic009G178200--Sobic004G028000 Sobic004G182500 Sobic004G182500 Sobic009G178200--Sobic004G182500 Sobic001G463500 Sobic001G463500 Sobic009G178200--Sobic001G463500 Sobic007G061400 Sobic007G061400 Sobic009G178200--Sobic007G061400 Sobic006G180200 Sobic006G180200 Sobic001G131400--Sobic006G180200 Sobic001G353600 Sobic001G353600 Sobic001G131400--Sobic001G353600 Sobic010G178200 Sobic010G178200 Sobic001G131400--Sobic010G178200 Sobic009G038100 Sobic009G038100 Sobic001G131400--Sobic009G038100 Sobic001G074300 Sobic001G074300 Sobic001G131400--Sobic001G074300 Sobic009G176000 Sobic009G176000 Sobic001G131400--Sobic009G176000 Sobic004G151400 Sobic004G151400 Sobic001G131400--Sobic004G151400 Sobic008G189300 Sobic008G189300 Sobic001G131400--Sobic008G189300 Sobic010G135000 Sobic010G135000 Sobic001G131400--Sobic010G135000 Sobic010G099900 Sobic010G099900 Sobic010G019900--Sobic010G099900 Sobic002G261000 Sobic002G261000 Sobic010G019900--Sobic002G261000 Sobic001G119400 Sobic001G119400 Sobic010G019900--Sobic001G119400 Sobic010G009300 Sobic010G009300 Sobic010G019900--Sobic010G009300 Sobic001G499300 Sobic001G499300 Sobic010G019900--Sobic001G499300 Sobic001G177800 Sobic001G177800 Sobic010G019900--Sobic001G177800 Sobic010G117900 Sobic010G117900 Sobic010G019900--Sobic010G117900 Sobic002G187500 Sobic002G187500 Sobic010G019900--Sobic002G187500 Sobic006G173900 Sobic006G173900 Sobic010G019900--Sobic006G173900 Sobic009G190000--Sobic002G279700 Sobic001G033100 Sobic001G033100 Sobic009G190000--Sobic001G033100 Sobic006G013800 Sobic006G013800 Sobic009G190000--Sobic006G013800 Sobic003G035900 Sobic003G035900 Sobic009G190000--Sobic003G035900 Sobic003G022300 Sobic003G022300 Sobic009G190000--Sobic003G022300 Sobic005G202500 Sobic005G202500 Sobic009G190000--Sobic005G202500 Sobic008G171300 Sobic008G171300 Sobic009G190000--Sobic008G171300 Sobic002G159100 Sobic002G159100 Sobic009G190000--Sobic002G159100 Sobic006G261700 Sobic006G261700 Sobic009G190000--Sobic006G261700 Sobic001G012400 Sobic001G012400 Sobic001G012500--Sobic001G012400 Sobic002G347300 Sobic002G347300 Sobic001G012500--Sobic002G347300 Sobic001G012500--Sobic001G012600 Sobic002G338400 Sobic002G338400 Sobic001G012500--Sobic002G338400 Sobic001G035600 Sobic001G035600 Sobic001G012500--Sobic001G035600 Sobic001G012200 Sobic001G012200 Sobic001G012500--Sobic001G012200 Sobic001G012300 Sobic001G012300 Sobic001G012500--Sobic001G012300 Sobic001G012500--Sobic003G340800 Sobic009G232200 Sobic009G232200 Sobic001G012500--Sobic009G232200
Octagon: transcription factors


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