Gene annotation
Transcriptome id Sobic.009G204400.1
Synonym Sb09g026144
Functional annotation M-phase phosphoprotein 10, putative, expressed
UniProt A0A1Z5R3M2
Pfam PF04006
Panther DB PTHR17039
NCBI CDD KOG2600; U3 small nucleolar ribonucleoprotein (snoRNP) subunit - Mpp10p
KEGG Orthology K14559; U3 small nucleolar RNA-associated protein MPP10
Gene Ontology GO:0006364; rRNA processing GO:0005732small nucleolar ribonucleoprotein complex GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT5G66540 : -
RAP-DB (Rice) LOC_Os12g04010.1 : M-phase phosphoprotein 10, putative, expressed
MaizeGDB (Corn) Zm00025a044306
Brachypodium PNT65506 , KQJ92414
Barley HORVU5Hr1G044440.1
Wheat TraesCS5D02G154000 , TraesCS5B02G136600 , TraesCS5A02G138100 , TraesCS5B02G137800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G171600 PPR repeat containing protein, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
2 Sobic.001G274900 - -
3 Sobic.010G276900 - -
4 Sobic.003G258900 ZOS3-17 - C2H2 zinc finger protein, expressed K12827: SF3A3, SAP61, splicing factor 3A subunit 3
5 Sobic.010G007100 AAA family ATPase, putative, expressed K14571: RIX7, ribosome biogenesis ATPase
6 Sobic.006G086600 IKI3 family protein, expressed K11373: ELP1, IKI3, elongator complex protein 1
7 Sobic.002G275600 RFC1 - Putative clamp loader of PCNA, replication factor C subunit 1, expressed K10754: replication factor C subunit 1
8 Sobic.004G320500 expressed protein K14794: ribosomal RNA-processing protein 12
9 Sobic.001G014100 expressed protein -
10 Sobic.006G245400 -(PubMedID : 34525227)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase
11 Sobic.010G127100 - -
12 Sobic.001G107900 fip1 motif family protein, expressed -
13 Sobic.006G052800 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor, putative, expressed K00164: OGDH, 2-oxoglutarate dehydrogenase E1 component
14 Sobic.002G396000 XPA-binding protein 2, putative, expressed K12867: SYF1, pre-mRNA-splicing factor SYF1
15 Sobic.009G158100 calcium-binding mitochondrial protein anon-60Da, putative, expressed K17800: LETM1, LETM1 and EF-hand domain-containing protein 1, mitochondrial
16 Sobic.001G453400 CCAAT/enhancer-binding protein, putative, expressed K14832: MAK21, NOC1, ribosome biogenesis protein MAK21
17 Sobic.001G101100 mitochondrial carrier protein, putative, expressed K15115: SLC25A32, solute carrier family 25 (mitochondrial folate transporter), member 32
18 Sobic.004G204200 EMB2423, putative, expressed K11137: TELO2, telomere length regulation protein
19 Sobic.009G103600 MEE12, putative, expressed -
20 Sobic.003G362600 AT hook motif family protein, expressed K15200: general transcription factor 3C polypeptide 2


Gene co-expression network
sample Sobic009G204400 Sobic009G204400 Sobic001G171600 Sobic001G171600 Sobic009G204400--Sobic001G171600 Sobic001G274900 Sobic001G274900 Sobic009G204400--Sobic001G274900 Sobic010G276900 Sobic010G276900 Sobic009G204400--Sobic010G276900 Sobic003G258900 Sobic003G258900 Sobic009G204400--Sobic003G258900 Sobic010G007100 Sobic010G007100 Sobic009G204400--Sobic010G007100 Sobic006G086600 Sobic006G086600 Sobic009G204400--Sobic006G086600 Sobic002G275600 Sobic002G275600 Sobic009G204400--Sobic002G275600 Sobic004G320500 Sobic004G320500 Sobic009G204400--Sobic004G320500 Sobic001G014100 Sobic001G014100 Sobic009G204400--Sobic001G014100 Sobic001G171600--Sobic006G086600 Sobic007G220300 Sobic007G220300 Sobic001G171600--Sobic007G220300 Sobic003G171500 Sobic003G171500 Sobic001G171600--Sobic003G171500 Sobic001G214600 Sobic001G214600 Sobic001G171600--Sobic001G214600 Sobic005G137700 Sobic005G137700 Sobic001G171600--Sobic005G137700 Sobic001G171600--Sobic009G204400 Sobic001G089600 Sobic001G089600 Sobic001G171600--Sobic001G089600 Sobic001G334700 Sobic001G334700 Sobic001G171600--Sobic001G334700 Sobic002G373950 Sobic002G373950 Sobic001G171600--Sobic002G373950 Sobic001G274900--Sobic009G204400 Sobic001G186401 Sobic001G186401 Sobic001G274900--Sobic001G186401 Sobic004G010800 Sobic004G010800 Sobic001G274900--Sobic004G010800 Sobic003G040000 Sobic003G040000 Sobic001G274900--Sobic003G040000 Sobic009G103600 Sobic009G103600 Sobic001G274900--Sobic009G103600 Sobic003G109700 Sobic003G109700 Sobic001G274900--Sobic003G109700 Sobic001G186500 Sobic001G186500 Sobic001G274900--Sobic001G186500 Sobic008G125600 Sobic008G125600 Sobic001G274900--Sobic008G125600 Sobic004G225000 Sobic004G225000 Sobic001G274900--Sobic004G225000 Sobic004G351100 Sobic004G351100 Sobic010G276900--Sobic004G351100 Sobic001G291000 Sobic001G291000 Sobic010G276900--Sobic001G291000 Sobic001G091400 Sobic001G091400 Sobic010G276900--Sobic001G091400 Sobic007G207000 Sobic007G207000 Sobic010G276900--Sobic007G207000 Sobic010G118950 Sobic010G118950 Sobic010G276900--Sobic010G118950 Sobic002G299700 Sobic002G299700 Sobic010G276900--Sobic002G299700 Sobic010G276900--Sobic002G275600 Sobic009G010600 Sobic009G010600 Sobic010G276900--Sobic009G010600 Sobic001G474600 Sobic001G474600 Sobic010G276900--Sobic001G474600 Sobic002G396000 Sobic002G396000 Sobic003G258900--Sobic002G396000 Sobic002G158700 Sobic002G158700 Sobic003G258900--Sobic002G158700 Sobic003G267800 Sobic003G267800 Sobic003G258900--Sobic003G267800 Sobic006G102100 Sobic006G102100 Sobic003G258900--Sobic006G102100 Sobic001G081000 Sobic001G081000 Sobic003G258900--Sobic001G081000 Sobic006G226300 Sobic006G226300 Sobic003G258900--Sobic006G226300 Sobic003G442000 Sobic003G442000 Sobic003G258900--Sobic003G442000 Sobic009G225200 Sobic009G225200 Sobic003G258900--Sobic009G225200 Sobic009G046700 Sobic009G046700 Sobic003G258900--Sobic009G046700 Sobic001G145400 Sobic001G145400 Sobic010G007100--Sobic001G145400 Sobic008G147200 Sobic008G147200 Sobic010G007100--Sobic008G147200 Sobic004G340400 Sobic004G340400 Sobic010G007100--Sobic004G340400 Sobic010G007100--Sobic006G086600 Sobic010G007100--Sobic005G137700 Sobic006G077200 Sobic006G077200 Sobic010G007100--Sobic006G077200 Sobic002G235200 Sobic002G235200 Sobic010G007100--Sobic002G235200 Sobic006G002800 Sobic006G002800 Sobic010G007100--Sobic006G002800 Sobic003G042400 Sobic003G042400 Sobic010G007100--Sobic003G042400 Sobic010G003400 Sobic010G003400 Sobic006G086600--Sobic010G003400 Sobic006G086600--Sobic001G145400 Sobic006G086600--Sobic001G089600 Sobic009G101200 Sobic009G101200 Sobic006G086600--Sobic009G101200 Sobic001G453400 Sobic001G453400 Sobic006G086600--Sobic001G453400 Sobic006G086600--Sobic004G320500 Sobic006G086600--Sobic002G235200 Sobic006G086600--Sobic007G220300 Sobic006G086600--Sobic010G007100 Sobic005G160100 Sobic005G160100 Sobic002G275600--Sobic005G160100 Sobic009G247400 Sobic009G247400 Sobic002G275600--Sobic009G247400 Sobic008G014500 Sobic008G014500 Sobic002G275600--Sobic008G014500 Sobic001G363500 Sobic001G363500 Sobic002G275600--Sobic001G363500 Sobic001G219600 Sobic001G219600 Sobic002G275600--Sobic001G219600 Sobic001G441400 Sobic001G441400 Sobic002G275600--Sobic001G441400 Sobic002G397500 Sobic002G397500 Sobic002G275600--Sobic002G397500 Sobic003G006400 Sobic003G006400 Sobic002G275600--Sobic003G006400 Sobic010G209400 Sobic010G209400 Sobic002G275600--Sobic010G209400 Sobic001G052400 Sobic001G052400 Sobic004G320500--Sobic001G052400 Sobic004G320500--Sobic006G086600 Sobic004G320500--Sobic004G340400 Sobic002G256700 Sobic002G256700 Sobic004G320500--Sobic002G256700 Sobic001G493700 Sobic001G493700 Sobic004G320500--Sobic001G493700 Sobic004G320500--Sobic001G089600 Sobic010G102600 Sobic010G102600 Sobic004G320500--Sobic010G102600 Sobic004G320500--Sobic010G003400 Sobic009G255600 Sobic009G255600 Sobic004G320500--Sobic009G255600 Sobic001G014100--Sobic004G351100 Sobic001G014100--Sobic007G207000 Sobic010G275500 Sobic010G275500 Sobic001G014100--Sobic010G275500 Sobic004G072100 Sobic004G072100 Sobic001G014100--Sobic004G072100 Sobic005G128400 Sobic005G128400 Sobic001G014100--Sobic005G128400 Sobic001G014100--Sobic010G276900 Sobic004G065100 Sobic004G065100 Sobic001G014100--Sobic004G065100 Sobic001G196500 Sobic001G196500 Sobic001G014100--Sobic001G196500 Sobic001G542700 Sobic001G542700 Sobic001G014100--Sobic001G542700
Octagon: transcription factors


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