Gene annotation
Transcriptome id Sobic.001G107900.1
Synonym ATFIPS5, ATFIP1[V], FIP1[V], FIPS5
Functional annotation fip1 motif family protein, expressed
UniProt A0A1B6QIE2 , C6JSN7
Pfam PF05182
Panther DB PTHR36884
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G58040 : homolog of yeast FIP1 [V]
RAP-DB (Rice) LOC_Os03g51520.1 : fip1 motif family protein, expressed
MaizeGDB (Corn) Zm00025a007956 , Zm00025a016908
Brachypodium KQK13453
Barley HORVU4Hr1G009390.5 , HORVU4Hr1G009390.4 , HORVU4Hr1G009390.7 , HORVU4Hr1G009390.6 , HORVU4Hr1G009390.1 , HORVU4Hr1G009390.3 , HORVU4Hr1G009390.2 , HORVU4Hr1G009390.9 , HORVU4Hr1G009390.8 , HORVU4Hr1G009390.11 , HORVU4Hr1G009390.10 , HORVU4Hr1G009390.13 , HORVU4Hr1G009390.12
Wheat TraesCS4A02G258200 , TraesCS4A02G258200 , TraesCS4D02G056600 , TraesCS4A02G258200 , TraesCS4B02G056200 , TraesCS4B02G056200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G542700 expressed protein -
2 Sobic.004G216500 hypothetical protein -
3 Sobic.009G138800 crooked neck, putative, expressed K12869: CRN, CRNKL1, CLF1, crooked neck
4 Sobic.004G065100 RNA recognition motif, putative, expressed K12842: U2-associated protein SR140
5 Sobic.008G192600 serine/threonine-protein kinase PRP4, putative, expressed K08827: serine/threonine-protein kinase PRP4
6 Sobic.001G014100 expressed protein -
7 Sobic.001G241200 protein kinase domain containing protein, expressed -
8 Sobic.007G117400 expressed protein -
9 Sobic.002G277600 XAP5 family protein, putative, expressed K13119: FAM50, protein FAM50
10 Sobic.003G293200 plus-3 domain containing protein, expressed -
11 Sobic.007G126600 RNA recognition motif containing protein, putative, expressed K12822: RBM25, RNA-binding protein 25
12 Sobic.005G128400 NLI interacting factor-like phosphatase, putative, expressed K18999: RNA polymerase II C-terminal domain phosphatase-like 3/4
13 Sobic.005G104500 phosphatidylinositol kinase, putative, expressed K00888: phosphatidylinositol 4-kinase A
14 Sobic.008G054500 WD domain, G-beta repeat domain containing protein, expressed -
15 Sobic.006G034100 methyl-CpG binding domain containing protein, expressed -
16 Sobic.004G314000 expressed protein -
17 Sobic.010G078900 transcription elongation factor SPT5 homolog 1, putative, expressed K15172: SUPT5H, transcription elongation factor SPT5
18 Sobic.006G245400 -(PubMedID : 34525227)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase
19 Sobic.001G174900 DEK C terminal domain containing protein, expressed K17046: protein DEK
20 Sobic.003G401600 expressed protein K12879: THO complex subunit 2


Gene co-expression network
sample Sobic001G107900 Sobic001G107900 Sobic001G542700 Sobic001G542700 Sobic001G107900--Sobic001G542700 Sobic004G216500 Sobic004G216500 Sobic001G107900--Sobic004G216500 Sobic009G138800 Sobic009G138800 Sobic001G107900--Sobic009G138800 Sobic004G065100 Sobic004G065100 Sobic001G107900--Sobic004G065100 Sobic008G192600 Sobic008G192600 Sobic001G107900--Sobic008G192600 Sobic001G014100 Sobic001G014100 Sobic001G107900--Sobic001G014100 Sobic001G241200 Sobic001G241200 Sobic001G107900--Sobic001G241200 Sobic007G117400 Sobic007G117400 Sobic001G107900--Sobic007G117400 Sobic002G277600 Sobic002G277600 Sobic001G107900--Sobic002G277600 Sobic004G009600 Sobic004G009600 Sobic001G542700--Sobic004G009600 Sobic010G065300 Sobic010G065300 Sobic001G542700--Sobic010G065300 Sobic001G542700--Sobic001G241200 Sobic002G299700 Sobic002G299700 Sobic001G542700--Sobic002G299700 Sobic001G542700--Sobic007G117400 Sobic003G293200 Sobic003G293200 Sobic001G542700--Sobic003G293200 Sobic009G040600 Sobic009G040600 Sobic001G542700--Sobic009G040600 Sobic007G061700 Sobic007G061700 Sobic001G542700--Sobic007G061700 Sobic010G209400 Sobic010G209400 Sobic001G542700--Sobic010G209400 Sobic008G054500 Sobic008G054500 Sobic004G216500--Sobic008G054500 Sobic007G126600 Sobic007G126600 Sobic004G216500--Sobic007G126600 Sobic001G511500 Sobic001G511500 Sobic004G216500--Sobic001G511500 Sobic003G119000 Sobic003G119000 Sobic004G216500--Sobic003G119000 Sobic004G216500--Sobic009G138800 Sobic003G108700 Sobic003G108700 Sobic004G216500--Sobic003G108700 Sobic004G216500--Sobic008G192600 Sobic007G167500 Sobic007G167500 Sobic004G216500--Sobic007G167500 Sobic004G216500--Sobic001G107900 Sobic005G104500 Sobic005G104500 Sobic009G138800--Sobic005G104500 Sobic009G138800--Sobic007G126600 Sobic007G161000 Sobic007G161000 Sobic009G138800--Sobic007G161000 Sobic006G209850 Sobic006G209850 Sobic009G138800--Sobic006G209850 Sobic009G138800--Sobic007G117400 Sobic009G138800--Sobic001G511500 Sobic003G280800 Sobic003G280800 Sobic009G138800--Sobic003G280800 Sobic001G274200 Sobic001G274200 Sobic009G138800--Sobic001G274200 Sobic009G138800--Sobic003G119000 Sobic004G065100--Sobic001G241200 Sobic002G309600 Sobic002G309600 Sobic004G065100--Sobic002G309600 Sobic004G065100--Sobic007G117400 Sobic004G065100--Sobic003G119000 Sobic005G027400 Sobic005G027400 Sobic004G065100--Sobic005G027400 Sobic001G154900 Sobic001G154900 Sobic004G065100--Sobic001G154900 Sobic005G008800 Sobic005G008800 Sobic004G065100--Sobic005G008800 Sobic004G065100--Sobic005G104500 Sobic005G112300 Sobic005G112300 Sobic004G065100--Sobic005G112300 Sobic008G192600--Sobic007G126600 Sobic008G192600--Sobic001G241200 Sobic009G026500 Sobic009G026500 Sobic008G192600--Sobic009G026500 Sobic002G404700 Sobic002G404700 Sobic008G192600--Sobic002G404700 Sobic008G192600--Sobic003G119000 Sobic003G372700 Sobic003G372700 Sobic008G192600--Sobic003G372700 Sobic008G192600--Sobic007G117400 Sobic008G192600--Sobic009G138800 Sobic004G314000 Sobic004G314000 Sobic008G192600--Sobic004G314000 Sobic004G351100 Sobic004G351100 Sobic001G014100--Sobic004G351100 Sobic007G207000 Sobic007G207000 Sobic001G014100--Sobic007G207000 Sobic010G275500 Sobic010G275500 Sobic001G014100--Sobic010G275500 Sobic004G072100 Sobic004G072100 Sobic001G014100--Sobic004G072100 Sobic005G128400 Sobic005G128400 Sobic001G014100--Sobic005G128400 Sobic010G276900 Sobic010G276900 Sobic001G014100--Sobic010G276900 Sobic001G014100--Sobic004G065100 Sobic001G196500 Sobic001G196500 Sobic001G014100--Sobic001G196500 Sobic001G014100--Sobic001G542700 Sobic001G241200--Sobic007G117400 Sobic001G241200--Sobic005G112300 Sobic001G241200--Sobic004G065100 Sobic001G241200--Sobic002G309600 Sobic001G241200--Sobic005G008800 Sobic008G009700 Sobic008G009700 Sobic001G241200--Sobic008G009700 Sobic001G241200--Sobic001G154900 Sobic001G241200--Sobic003G119000 Sobic001G540400 Sobic001G540400 Sobic001G241200--Sobic001G540400 Sobic007G117400--Sobic002G309600 Sobic007G117400--Sobic001G241200 Sobic007G117400--Sobic004G065100 Sobic007G117400--Sobic007G161000 Sobic007G117400--Sobic003G280800 Sobic007G117400--Sobic004G009600 Sobic007G117400--Sobic001G154900 Sobic007G117400--Sobic009G040600 Sobic007G117400--Sobic005G008800 Sobic001G124000 Sobic001G124000 Sobic002G277600--Sobic001G124000 Sobic004G237100 Sobic004G237100 Sobic002G277600--Sobic004G237100 Sobic001G375300 Sobic001G375300 Sobic002G277600--Sobic001G375300 Sobic003G160000 Sobic003G160000 Sobic002G277600--Sobic003G160000 Sobic002G277600--Sobic001G107900 Sobic009G178800 Sobic009G178800 Sobic002G277600--Sobic009G178800 Sobic002G277600--Sobic004G065100 Sobic008G124700 Sobic008G124700 Sobic002G277600--Sobic008G124700 Sobic001G090400 Sobic001G090400 Sobic002G277600--Sobic001G090400
Octagon: transcription factors


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