Gene annotation
Transcriptome id Sobic.003G401600.1
Synonym THO2, Sb03g043780, AtTHO2
Functional annotation expressed protein
UniProt A0A1W0W166
Pfam PF11732 PF16134 PF11262
Panther DB PTHR21597 PTHR21597:SF0
NCBI CDD -
KEGG Orthology K12879; THO complex subunit 2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G24706 : THO2
RAP-DB (Rice) LOC_Os01g68810.1 : expressed protein
MaizeGDB (Corn) Zm00025a028049
Brachypodium KQK15799 , KQK15793 , KQK15792 , KQK15790 , KQK15797 , KQK15796 , KQK15795 , KQK11195 , KQK11194 , KQK11193 , KQK11192 , PNT74952 , KQK15800
Barley HORVU3Hr1G093430.49 , HORVU3Hr1G093430.48 , HORVU3Hr1G093430.41 , HORVU3Hr1G093430.40 , HORVU3Hr1G093430.43 , HORVU3Hr1G093430.42 , HORVU3Hr1G093430.45 , HORVU3Hr1G093430.44 , HORVU3Hr1G093430.47 , HORVU3Hr1G093430.46 , HORVU3Hr1G093430.8 , HORVU3Hr1G093430.9 , HORVU3Hr1G109960.8 , HORVU3Hr1G109960.9 , HORVU3Hr1G109960.6 , HORVU3Hr1G109960.7 , HORVU3Hr1G093430.2 , HORVU3Hr1G093430.3 , HORVU3Hr1G093430.4 , HORVU3Hr1G093430.5 , HORVU3Hr1G093430.6 , HORVU3Hr1G093430.7 , HORVU3Hr1G093430.58 , HORVU3Hr1G093430.59 , HORVU3Hr1G093430.56 , HORVU3Hr1G093430.57 , HORVU3Hr1G093430.54 , HORVU3Hr1G093430.55 , HORVU3Hr1G093430.52 , HORVU3Hr1G093430.53 , HORVU3Hr1G093430.50 , HORVU3Hr1G093430.51 , HORVU3Hr1G093430.29 , HORVU3Hr1G093430.28 , HORVU3Hr1G093430.23 , HORVU3Hr1G093430.22 , HORVU3Hr1G093430.21 , HORVU3Hr1G093430.20 , HORVU3Hr1G093430.27 , HORVU3Hr1G093430.26 , HORVU3Hr1G093430.25 , HORVU3Hr1G093430.24 , HORVU3Hr1G109960.21 , HORVU3Hr1G109960.20 , HORVU3Hr1G093430.38 , HORVU3Hr1G093430.39 , HORVU3Hr1G093430.30 , HORVU3Hr1G093430.31 , HORVU3Hr1G093430.32 , HORVU3Hr1G093430.33 , HORVU3Hr1G093430.34 , HORVU3Hr1G093430.35 , HORVU3Hr1G093430.36 , HORVU3Hr1G093430.37 , HORVU3Hr1G109960.14 , HORVU3Hr1G109960.15 , HORVU3Hr1G109960.16 , HORVU3Hr1G109960.17 , HORVU3Hr1G109960.10 , HORVU3Hr1G109960.4 , HORVU3Hr1G093430.71 , HORVU3Hr1G109960.5 , HORVU3Hr1G109960.12 , HORVU3Hr1G109960.2 , HORVU3Hr1G109960.13 , HORVU3Hr1G109960.3 , HORVU3Hr1G109960.1 , HORVU3Hr1G109960.18 , HORVU3Hr1G093430.12 , HORVU3Hr1G093430.13 , HORVU3Hr1G093430.10 , HORVU3Hr1G093430.11 , HORVU3Hr1G093430.16 , HORVU3Hr1G093430.17 , HORVU3Hr1G093430.14 , HORVU3Hr1G093430.15 , HORVU3Hr1G093430.18 , HORVU3Hr1G093430.19 , HORVU3Hr1G093380.4 , HORVU3Hr1G093380.5 , HORVU3Hr1G093380.2 , HORVU3Hr1G093380.3 , HORVU3Hr1G093380.1 , HORVU3Hr1G093430.67 , HORVU3Hr1G093430.66 , HORVU3Hr1G093430.65 , HORVU3Hr1G093430.64 , HORVU3Hr1G093430.63 , HORVU3Hr1G093430.62 , HORVU3Hr1G093430.61 , HORVU3Hr1G093430.60 , HORVU3Hr1G093430.69 , HORVU3Hr1G093430.68 , HORVU3Hr1G093430.74 , HORVU3Hr1G093430.75 , HORVU3Hr1G093430.76 , HORVU3Hr1G093430.77 , HORVU3Hr1G093430.70 , HORVU3Hr1G109960.11 , HORVU3Hr1G093430.72 , HORVU3Hr1G093430.73 , HORVU3Hr1G093430.78 , HORVU3Hr1G109960.19
Wheat TraesCS3A02G422800 , TraesCS3A02G422800 , TraesCS3D02G504300 , TraesCS3D02G504300 , TraesCS3D02G504300 , TraesCS3D02G418000 , TraesCS3D02G418000 , TraesCS3D02G418000 , TraesCS3B02G458100 , TraesCS3A02G496300 , TraesCS3B02G558300 , TraesCS3B02G558300 , TraesCS3A02G496300 , TraesCS3A02G496300 , TraesCS3A02G496300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G314000 expressed protein -
2 Sobic.005G008800 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
3 Sobic.001G072500 expressed protein K12879: THO complex subunit 2
4 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
5 Sobic.010G139000 surp module family protein, putative, expressed K13123: G patch domain-containing protein 1
6 Sobic.004G209600 SWIM zinc finger family protein, putative, expressed -
7 Sobic.007G161000 RecF/RecN/SMC N terminal domain containing protein, expressed K06636: structural maintenance of chromosome 1
8 Sobic.003G252100 DDT, putative, expressed -
9 Sobic.008G192600 serine/threonine-protein kinase PRP4, putative, expressed K08827: serine/threonine-protein kinase PRP4
10 Sobic.007G126600 RNA recognition motif containing protein, putative, expressed K12822: RBM25, RNA-binding protein 25
11 Sobic.001G540400 expressed protein -
12 Sobic.007G062800 SET domain containing protein, expressed -
13 Sobic.004G242400 nuclear-pore anchor, putative, expressed K09291: TPR, MLP1, nucleoprotein TPR
14 Sobic.001G241200 protein kinase domain containing protein, expressed -
15 Sobic.006G182900 expressed protein -
16 Sobic.002G404700 expressed protein K11367: chromodomain-helicase-DNA-binding protein 1
17 Sobic.004G023000 SAC9, putative, expressed -
18 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
19 Sobic.007G117400 expressed protein -
20 Sobic.001G365900 PWWP domain containing protein, expressed -


Gene co-expression network
sample Sobic003G401600 Sobic003G401600 Sobic004G314000 Sobic004G314000 Sobic003G401600--Sobic004G314000 Sobic005G008800 Sobic005G008800 Sobic003G401600--Sobic005G008800 Sobic001G072500 Sobic001G072500 Sobic003G401600--Sobic001G072500 Sobic010G206900 Sobic010G206900 Sobic003G401600--Sobic010G206900 Sobic010G139000 Sobic010G139000 Sobic003G401600--Sobic010G139000 Sobic004G209600 Sobic004G209600 Sobic003G401600--Sobic004G209600 Sobic007G161000 Sobic007G161000 Sobic003G401600--Sobic007G161000 Sobic003G252100 Sobic003G252100 Sobic003G401600--Sobic003G252100 Sobic008G192600 Sobic008G192600 Sobic003G401600--Sobic008G192600 Sobic004G314000--Sobic010G139000 Sobic004G314000--Sobic005G008800 Sobic005G112300 Sobic005G112300 Sobic004G314000--Sobic005G112300 Sobic010G279450 Sobic010G279450 Sobic004G314000--Sobic010G279450 Sobic004G242400 Sobic004G242400 Sobic004G314000--Sobic004G242400 Sobic004G314000--Sobic010G206900 Sobic004G314000--Sobic003G401600 Sobic002G309600 Sobic002G309600 Sobic004G314000--Sobic002G309600 Sobic009G040600 Sobic009G040600 Sobic004G314000--Sobic009G040600 Sobic001G540400 Sobic001G540400 Sobic005G008800--Sobic001G540400 Sobic003G408600 Sobic003G408600 Sobic005G008800--Sobic003G408600 Sobic005G008800--Sobic005G112300 Sobic007G062800 Sobic007G062800 Sobic005G008800--Sobic007G062800 Sobic001G289600 Sobic001G289600 Sobic005G008800--Sobic001G289600 Sobic005G008800--Sobic004G314000 Sobic008G009700 Sobic008G009700 Sobic005G008800--Sobic008G009700 Sobic001G289800 Sobic001G289800 Sobic005G008800--Sobic001G289800 Sobic009G109200 Sobic009G109200 Sobic005G008800--Sobic009G109200 Sobic002G169633 Sobic002G169633 Sobic001G072500--Sobic002G169633 Sobic001G072500--Sobic003G401600 Sobic004G263600 Sobic004G263600 Sobic001G072500--Sobic004G263600 Sobic001G072500--Sobic004G209600 Sobic002G316600 Sobic002G316600 Sobic001G072500--Sobic002G316600 Sobic001G072500--Sobic004G314000 Sobic006G131500 Sobic006G131500 Sobic001G072500--Sobic006G131500 Sobic001G072500--Sobic010G206900 Sobic001G072500--Sobic010G139000 Sobic010G010700 Sobic010G010700 Sobic010G206900--Sobic010G010700 Sobic001G365900 Sobic001G365900 Sobic010G206900--Sobic001G365900 Sobic004G034900 Sobic004G034900 Sobic010G206900--Sobic004G034900 Sobic001G534700 Sobic001G534700 Sobic010G206900--Sobic001G534700 Sobic010G247800 Sobic010G247800 Sobic010G206900--Sobic010G247800 Sobic002G411600 Sobic002G411600 Sobic010G206900--Sobic002G411600 Sobic008G001200 Sobic008G001200 Sobic010G206900--Sobic008G001200 Sobic003G196300 Sobic003G196300 Sobic010G206900--Sobic003G196300 Sobic009G165700 Sobic009G165700 Sobic010G206900--Sobic009G165700 Sobic010G139000--Sobic004G314000 Sobic010G139000--Sobic005G112300 Sobic010G139000--Sobic010G279450 Sobic010G139000--Sobic010G206900 Sobic001G311500 Sobic001G311500 Sobic010G139000--Sobic001G311500 Sobic001G036050 Sobic001G036050 Sobic010G139000--Sobic001G036050 Sobic010G112100 Sobic010G112100 Sobic010G139000--Sobic010G112100 Sobic010G139000--Sobic010G010700 Sobic010G139000--Sobic005G008800 Sobic004G209600--Sobic010G139000 Sobic004G209600--Sobic004G314000 Sobic004G209600--Sobic010G010700 Sobic007G117400 Sobic007G117400 Sobic004G209600--Sobic007G117400 Sobic004G209600--Sobic005G008800 Sobic002G134200 Sobic002G134200 Sobic004G209600--Sobic002G134200 Sobic004G209600--Sobic005G112300 Sobic004G209600--Sobic004G242400 Sobic003G280800 Sobic003G280800 Sobic004G209600--Sobic003G280800 Sobic004G039200 Sobic004G039200 Sobic007G161000--Sobic004G039200 Sobic007G161000--Sobic007G117400 Sobic009G024000 Sobic009G024000 Sobic007G161000--Sobic009G024000 Sobic007G161000--Sobic010G139000 Sobic006G182900 Sobic006G182900 Sobic007G161000--Sobic006G182900 Sobic007G161000--Sobic002G309600 Sobic007G161000--Sobic004G314000 Sobic007G161000--Sobic002G134200 Sobic008G028700 Sobic008G028700 Sobic007G161000--Sobic008G028700 Sobic003G252100--Sobic004G314000 Sobic004G065100 Sobic004G065100 Sobic003G252100--Sobic004G065100 Sobic003G252100--Sobic003G401600 Sobic002G299700 Sobic002G299700 Sobic003G252100--Sobic002G299700 Sobic004G023000 Sobic004G023000 Sobic003G252100--Sobic004G023000 Sobic003G252100--Sobic005G008800 Sobic003G252100--Sobic004G242400 Sobic002G211800 Sobic002G211800 Sobic003G252100--Sobic002G211800 Sobic003G252100--Sobic010G139000 Sobic007G126600 Sobic007G126600 Sobic008G192600--Sobic007G126600 Sobic001G241200 Sobic001G241200 Sobic008G192600--Sobic001G241200 Sobic009G026500 Sobic009G026500 Sobic008G192600--Sobic009G026500 Sobic002G404700 Sobic002G404700 Sobic008G192600--Sobic002G404700 Sobic003G119000 Sobic003G119000 Sobic008G192600--Sobic003G119000 Sobic003G372700 Sobic003G372700 Sobic008G192600--Sobic003G372700 Sobic008G192600--Sobic007G117400 Sobic009G138800 Sobic009G138800 Sobic008G192600--Sobic009G138800 Sobic008G192600--Sobic004G314000
Octagon: transcription factors


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