Gene annotation
Transcriptome id Sobic.008G192600.1
Synonym Sb08g023260
Functional annotation serine/threonine-protein kinase PRP4, putative, expressed
UniProt A0A1B6PF34
Pfam PF07714
Panther DB PTHR24056 PTHR24056:SF45
NCBI CDD -
KEGG Orthology K08827; serine/threonine-protein kinase PRP4
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G25840 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os12g44330.1 : serine/threonine-protein kinase PRP4, putative, expressed
MaizeGDB (Corn) Zm00025a025048 , Zm00025a004892
Brachypodium PNT62251 , KQJ85557 , KQJ85556 , KQJ85555 , KQJ85558
Barley HORVU5Hr1G000200.31 , HORVU5Hr1G000200.30 , HORVU5Hr1G000200.37 , HORVU4Hr1G007330.11 , HORVU4Hr1G007330.10 , HORVU4Hr1G007330.14 , HORVU4Hr1G007330.19 , HORVU4Hr1G007330.18 , HORVU4Hr1G007330.5 , HORVU4Hr1G007330.4 , HORVU4Hr1G007330.6 , HORVU4Hr1G007330.9 , HORVU5Hr1G000200.1 , HORVU5Hr1G000200.3 , HORVU5Hr1G000200.2 , HORVU5Hr1G000200.5 , HORVU5Hr1G000200.4 , HORVU5Hr1G000200.7 , HORVU5Hr1G000200.6 , HORVU5Hr1G000200.9 , HORVU5Hr1G000200.8 , HORVU5Hr1G000200.40 , HORVU5Hr1G000200.33 , HORVU5Hr1G000200.32 , HORVU5Hr1G000200.36 , HORVU5Hr1G000200.35 , HORVU5Hr1G000200.34 , HORVU5Hr1G000200.39 , HORVU5Hr1G000200.38 , HORVU5Hr1G000200.20 , HORVU5Hr1G000200.21 , HORVU5Hr1G000200.22 , HORVU5Hr1G000200.23 , HORVU5Hr1G000200.24 , HORVU5Hr1G000200.25 , HORVU5Hr1G000200.26 , HORVU5Hr1G000200.27 , HORVU5Hr1G000200.28 , HORVU5Hr1G000200.29 , HORVU4Hr1G007330.24 , HORVU4Hr1G007330.25 , HORVU4Hr1G007330.20 , HORVU4Hr1G007330.21 , HORVU4Hr1G007330.22 , HORVU5Hr1G000200.15 , HORVU5Hr1G000200.14 , HORVU5Hr1G000200.17 , HORVU5Hr1G000200.16 , HORVU5Hr1G000200.11 , HORVU5Hr1G000200.10 , HORVU5Hr1G000200.13 , HORVU5Hr1G000200.12 , HORVU5Hr1G000200.19 , HORVU5Hr1G000200.18
Wheat TraesCS5D02G000600 , TraesCS4B02G044900 , TraesCS4D02G044900 , TraesCS5B02G001400 , TraesCS4A02G269100 , TraesCS5A02G000100 , TraesCS4D02G044600 , TraesCS4D02G044600
Populus -


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cDNA sequences
Sobic.008G192600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G126600 RNA recognition motif containing protein, putative, expressed K12822: RBM25, RNA-binding protein 25
2 Sobic.001G241200 protein kinase domain containing protein, expressed -
3 Sobic.009G026500 ATSIZ1/SIZ1, putative, expressed -
4 Sobic.002G404700 expressed protein K11367: chromodomain-helicase-DNA-binding protein 1
5 Sobic.003G119000 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
6 Sobic.003G372700 expressed protein -
7 Sobic.007G117400 expressed protein -
8 Sobic.009G138800 crooked neck, putative, expressed K12869: CRN, CRNKL1, CLF1, crooked neck
9 Sobic.004G314000 expressed protein -
10 Sobic.003G401600 expressed protein K12879: THO complex subunit 2
11 Sobic.005G104500 phosphatidylinositol kinase, putative, expressed K00888: phosphatidylinositol 4-kinase A
12 Sobic.002G191800 - -
13 Sobic.007G065400 expressed protein K14400: pre-mRNA cleavage complex 2 protein Pcf11
14 Sobic.002G405800 PHD-finger family protein, expressed -
15 Sobic.004G065100 RNA recognition motif, putative, expressed K12842: U2-associated protein SR140
16 Sobic.001G214300 expressed protein -
17 Sobic.004G216500 hypothetical protein -
18 Sobic.005G008800 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
19 Sobic.004G205800 cyclin-dependent kinase G-1, putative, expressed K08818: cell division cycle 2-like
20 Sobic.003G059750 - K11797: PHIP, PH-interacting protein


Gene co-expression network
sample Sobic008G192600 Sobic008G192600 Sobic007G126600 Sobic007G126600 Sobic008G192600--Sobic007G126600 Sobic001G241200 Sobic001G241200 Sobic008G192600--Sobic001G241200 Sobic009G026500 Sobic009G026500 Sobic008G192600--Sobic009G026500 Sobic002G404700 Sobic002G404700 Sobic008G192600--Sobic002G404700 Sobic003G119000 Sobic003G119000 Sobic008G192600--Sobic003G119000 Sobic003G372700 Sobic003G372700 Sobic008G192600--Sobic003G372700 Sobic007G117400 Sobic007G117400 Sobic008G192600--Sobic007G117400 Sobic009G138800 Sobic009G138800 Sobic008G192600--Sobic009G138800 Sobic004G314000 Sobic004G314000 Sobic008G192600--Sobic004G314000 Sobic007G126600--Sobic008G192600 Sobic007G126600--Sobic003G119000 Sobic007G126600--Sobic002G404700 Sobic007G065400 Sobic007G065400 Sobic007G126600--Sobic007G065400 Sobic007G126600--Sobic009G026500 Sobic002G006900 Sobic002G006900 Sobic007G126600--Sobic002G006900 Sobic003G108700 Sobic003G108700 Sobic007G126600--Sobic003G108700 Sobic001G347300 Sobic001G347300 Sobic007G126600--Sobic001G347300 Sobic007G126600--Sobic001G241200 Sobic001G241200--Sobic007G117400 Sobic005G112300 Sobic005G112300 Sobic001G241200--Sobic005G112300 Sobic004G065100 Sobic004G065100 Sobic001G241200--Sobic004G065100 Sobic002G309600 Sobic002G309600 Sobic001G241200--Sobic002G309600 Sobic005G008800 Sobic005G008800 Sobic001G241200--Sobic005G008800 Sobic008G009700 Sobic008G009700 Sobic001G241200--Sobic008G009700 Sobic001G154900 Sobic001G154900 Sobic001G241200--Sobic001G154900 Sobic001G241200--Sobic003G119000 Sobic001G540400 Sobic001G540400 Sobic001G241200--Sobic001G540400 Sobic001G365900 Sobic001G365900 Sobic009G026500--Sobic001G365900 Sobic009G026500--Sobic007G126600 Sobic009G026500--Sobic008G192600 Sobic001G214300 Sobic001G214300 Sobic009G026500--Sobic001G214300 Sobic010G153700 Sobic010G153700 Sobic009G026500--Sobic010G153700 Sobic009G026500--Sobic003G372700 Sobic001G290100 Sobic001G290100 Sobic009G026500--Sobic001G290100 Sobic009G026500--Sobic002G006900 Sobic002G008900 Sobic002G008900 Sobic009G026500--Sobic002G008900 Sobic002G405800 Sobic002G405800 Sobic002G404700--Sobic002G405800 Sobic003G059750 Sobic003G059750 Sobic002G404700--Sobic003G059750 Sobic002G404700--Sobic002G309600 Sobic002G404700--Sobic007G126600 Sobic002G404700--Sobic004G314000 Sobic002G404700--Sobic005G112300 Sobic010G279450 Sobic010G279450 Sobic002G404700--Sobic010G279450 Sobic002G404700--Sobic003G119000 Sobic002G404700--Sobic001G241200 Sobic003G119000--Sobic003G372700 Sobic002G071500 Sobic002G071500 Sobic003G119000--Sobic002G071500 Sobic003G280800 Sobic003G280800 Sobic003G119000--Sobic003G280800 Sobic003G119000--Sobic007G065400 Sobic007G167500 Sobic007G167500 Sobic003G119000--Sobic007G167500 Sobic003G119000--Sobic007G126600 Sobic001G511500 Sobic001G511500 Sobic003G119000--Sobic001G511500 Sobic003G119000--Sobic002G309600 Sobic003G119000--Sobic001G241200 Sobic003G372700--Sobic002G006900 Sobic003G372700--Sobic003G119000 Sobic003G372700--Sobic007G065400 Sobic003G372700--Sobic005G112300 Sobic002G191800 Sobic002G191800 Sobic003G372700--Sobic002G191800 Sobic009G040600 Sobic009G040600 Sobic003G372700--Sobic009G040600 Sobic003G372700--Sobic002G309600 Sobic003G372700--Sobic003G280800 Sobic001G474600 Sobic001G474600 Sobic003G372700--Sobic001G474600 Sobic007G117400--Sobic002G309600 Sobic007G117400--Sobic001G241200 Sobic007G117400--Sobic004G065100 Sobic007G161000 Sobic007G161000 Sobic007G117400--Sobic007G161000 Sobic007G117400--Sobic003G280800 Sobic004G009600 Sobic004G009600 Sobic007G117400--Sobic004G009600 Sobic007G117400--Sobic001G154900 Sobic007G117400--Sobic009G040600 Sobic007G117400--Sobic005G008800 Sobic005G104500 Sobic005G104500 Sobic009G138800--Sobic005G104500 Sobic009G138800--Sobic007G126600 Sobic009G138800--Sobic007G161000 Sobic006G209850 Sobic006G209850 Sobic009G138800--Sobic006G209850 Sobic009G138800--Sobic007G117400 Sobic009G138800--Sobic001G511500 Sobic009G138800--Sobic003G280800 Sobic001G274200 Sobic001G274200 Sobic009G138800--Sobic001G274200 Sobic009G138800--Sobic003G119000 Sobic010G139000 Sobic010G139000 Sobic004G314000--Sobic010G139000 Sobic004G314000--Sobic005G008800 Sobic004G314000--Sobic005G112300 Sobic004G314000--Sobic010G279450 Sobic004G242400 Sobic004G242400 Sobic004G314000--Sobic004G242400 Sobic010G206900 Sobic010G206900 Sobic004G314000--Sobic010G206900 Sobic003G401600 Sobic003G401600 Sobic004G314000--Sobic003G401600 Sobic004G314000--Sobic002G309600 Sobic004G314000--Sobic009G040600
Octagon: transcription factors


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