Gene annotation
Transcriptome id Sobic.005G104500.1,Sobic.005G104500.2
Synonym Sb05g009420, PI-4KBETA1, PI4KBETA1
Functional annotation phosphatidylinositol kinase, putative, expressed
UniProt C5Y1Y5 , A0A1Z5RI58
Pfam PF00454
Panther DB PTHR10048 PTHR10048:SF22
NCBI CDD -
KEGG Orthology K00888; phosphatidylinositol 4-kinase A
Gene Ontology GO:0016773; phosphotransferase activity, alcohol group as acceptor GO:0006661phosphatidylinositol biosynthetic process GO:00044301-phosphatidylinositol 4-kinase activity


Orthologs (automatic annotation)
TAIR AT5G64070 : phosphatidylinositol 4-OH kinase beta1
RAP-DB (Rice) LOC_Os11g10420.1 : phosphatidylinositol kinase, putative, expressed
MaizeGDB (Corn) Zm00025a008368 , Zm00025a003923 , Zm00025a007963 , Zm00025a021398 , Zm00025a007964 , Zm00025a006913 , Zm00025a029624
Brachypodium KQJ89004
Barley HORVU4Hr1G017010.1 , HORVU4Hr1G017010.3 , HORVU4Hr1G017010.2 , HORVU4Hr1G017010.5 , HORVU4Hr1G017010.4 , HORVU4Hr1G017010.7 , HORVU4Hr1G017010.6 , HORVU4Hr1G017010.8
Wheat TraesCS4B02G105400 , TraesCS4B02G105400 , TraesCS4B02G105400 , TraesCS4A02G201300 , TraesCS4A02G201300 , TraesCS4A02G201300 , TraesCS4A02G201300 , TraesCS4D02G102300 , TraesCS4D02G102300 , TraesCS4D02G102300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G065100 RNA recognition motif, putative, expressed K12842: U2-associated protein SR140
2 Sobic.002G309600 DNA-binding protein, putative, expressed K14326: UPF1, regulator of nonsense transcripts 1
3 Sobic.001G241200 protein kinase domain containing protein, expressed -
4 Sobic.009G138800 crooked neck, putative, expressed K12869: CRN, CRNKL1, CLF1, crooked neck
5 Sobic.002G006900 tetratricopeptide repeat domain containing protein, expressed -
6 Sobic.003G280800 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10
7 Sobic.003G119000 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
8 Sobic.007G126600 RNA recognition motif containing protein, putative, expressed K12822: RBM25, RNA-binding protein 25
9 Sobic.007G117400 expressed protein -
10 Sobic.008G173900 "OsPPKL3(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659913)@serine/threonine-protein phosphatase BSL2, putative, expressed -
11 Sobic.003G372700 expressed protein -
12 Sobic.009G026500 ATSIZ1/SIZ1, putative, expressed -
13 Sobic.001G205200 expressed protein -
14 Sobic.008G009700 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
15 Sobic.001G154900 "GL3.1/qGL3(Ortholog in rice:Qi et al., 2012, Zhang et al., 2012)"(PubMedID : 31659834)@serine/threonine protein phosphatase, putative, expressed -
16 Sobic.003G084900 expressed protein -
17 Sobic.004G145500 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
18 Sobic.008G192600 serine/threonine-protein kinase PRP4, putative, expressed K08827: serine/threonine-protein kinase PRP4
19 Sobic.007G161000 RecF/RecN/SMC N terminal domain containing protein, expressed K06636: structural maintenance of chromosome 1
20 Sobic.002G404700 expressed protein K11367: chromodomain-helicase-DNA-binding protein 1


Gene co-expression network
sample Sobic005G104500 Sobic005G104500 Sobic004G065100 Sobic004G065100 Sobic005G104500--Sobic004G065100 Sobic002G309600 Sobic002G309600 Sobic005G104500--Sobic002G309600 Sobic001G241200 Sobic001G241200 Sobic005G104500--Sobic001G241200 Sobic009G138800 Sobic009G138800 Sobic005G104500--Sobic009G138800 Sobic002G006900 Sobic002G006900 Sobic005G104500--Sobic002G006900 Sobic003G280800 Sobic003G280800 Sobic005G104500--Sobic003G280800 Sobic003G119000 Sobic003G119000 Sobic005G104500--Sobic003G119000 Sobic007G126600 Sobic007G126600 Sobic005G104500--Sobic007G126600 Sobic007G117400 Sobic007G117400 Sobic005G104500--Sobic007G117400 Sobic004G065100--Sobic001G241200 Sobic004G065100--Sobic002G309600 Sobic004G065100--Sobic007G117400 Sobic004G065100--Sobic003G119000 Sobic005G027400 Sobic005G027400 Sobic004G065100--Sobic005G027400 Sobic001G154900 Sobic001G154900 Sobic004G065100--Sobic001G154900 Sobic005G008800 Sobic005G008800 Sobic004G065100--Sobic005G008800 Sobic004G065100--Sobic005G104500 Sobic005G112300 Sobic005G112300 Sobic004G065100--Sobic005G112300 Sobic002G309600--Sobic003G280800 Sobic002G134200 Sobic002G134200 Sobic002G309600--Sobic002G134200 Sobic002G309600--Sobic007G117400 Sobic008G009700 Sobic008G009700 Sobic002G309600--Sobic008G009700 Sobic001G071400 Sobic001G071400 Sobic002G309600--Sobic001G071400 Sobic002G309600--Sobic005G112300 Sobic002G309600--Sobic004G065100 Sobic002G309600--Sobic001G154900 Sobic002G309600--Sobic002G006900 Sobic001G241200--Sobic007G117400 Sobic001G241200--Sobic005G112300 Sobic001G241200--Sobic004G065100 Sobic001G241200--Sobic002G309600 Sobic001G241200--Sobic005G008800 Sobic001G241200--Sobic008G009700 Sobic001G241200--Sobic001G154900 Sobic001G241200--Sobic003G119000 Sobic001G540400 Sobic001G540400 Sobic001G241200--Sobic001G540400 Sobic009G138800--Sobic005G104500 Sobic009G138800--Sobic007G126600 Sobic007G161000 Sobic007G161000 Sobic009G138800--Sobic007G161000 Sobic006G209850 Sobic006G209850 Sobic009G138800--Sobic006G209850 Sobic009G138800--Sobic007G117400 Sobic001G511500 Sobic001G511500 Sobic009G138800--Sobic001G511500 Sobic009G138800--Sobic003G280800 Sobic001G274200 Sobic001G274200 Sobic009G138800--Sobic001G274200 Sobic009G138800--Sobic003G119000 Sobic008G047800 Sobic008G047800 Sobic002G006900--Sobic008G047800 Sobic007G065400 Sobic007G065400 Sobic002G006900--Sobic007G065400 Sobic003G200200 Sobic003G200200 Sobic002G006900--Sobic003G200200 Sobic003G372700 Sobic003G372700 Sobic002G006900--Sobic003G372700 Sobic009G040600 Sobic009G040600 Sobic002G006900--Sobic009G040600 Sobic001G155000 Sobic001G155000 Sobic002G006900--Sobic001G155000 Sobic002G006900--Sobic002G309600 Sobic001G214300 Sobic001G214300 Sobic002G006900--Sobic001G214300 Sobic001G512700 Sobic001G512700 Sobic002G006900--Sobic001G512700 Sobic003G280800--Sobic002G309600 Sobic003G280800--Sobic001G071400 Sobic003G280800--Sobic002G134200 Sobic003G280800--Sobic006G209850 Sobic003G280800--Sobic003G119000 Sobic001G474600 Sobic001G474600 Sobic003G280800--Sobic001G474600 Sobic003G280800--Sobic007G117400 Sobic006G216800 Sobic006G216800 Sobic003G280800--Sobic006G216800 Sobic003G280800--Sobic003G372700 Sobic003G119000--Sobic003G372700 Sobic002G071500 Sobic002G071500 Sobic003G119000--Sobic002G071500 Sobic003G119000--Sobic003G280800 Sobic003G119000--Sobic007G065400 Sobic007G167500 Sobic007G167500 Sobic003G119000--Sobic007G167500 Sobic003G119000--Sobic007G126600 Sobic003G119000--Sobic001G511500 Sobic003G119000--Sobic002G309600 Sobic003G119000--Sobic001G241200 Sobic008G192600 Sobic008G192600 Sobic007G126600--Sobic008G192600 Sobic007G126600--Sobic003G119000 Sobic002G404700 Sobic002G404700 Sobic007G126600--Sobic002G404700 Sobic007G126600--Sobic007G065400 Sobic009G026500 Sobic009G026500 Sobic007G126600--Sobic009G026500 Sobic007G126600--Sobic002G006900 Sobic003G108700 Sobic003G108700 Sobic007G126600--Sobic003G108700 Sobic001G347300 Sobic001G347300 Sobic007G126600--Sobic001G347300 Sobic007G126600--Sobic001G241200 Sobic007G117400--Sobic002G309600 Sobic007G117400--Sobic001G241200 Sobic007G117400--Sobic004G065100 Sobic007G117400--Sobic007G161000 Sobic007G117400--Sobic003G280800 Sobic004G009600 Sobic004G009600 Sobic007G117400--Sobic004G009600 Sobic007G117400--Sobic001G154900 Sobic007G117400--Sobic009G040600 Sobic007G117400--Sobic005G008800
Octagon: transcription factors


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