Gene annotation
Transcriptome id Sobic.002G191800.2,Sobic.002G191800.1
Synonym
Functional annotation -
UniProt A0A1B6QCD5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G065400 expressed protein K14400: pre-mRNA cleavage complex 2 protein Pcf11
2 Sobic.003G372700 expressed protein -
3 Sobic.002G180666 - -
4 Sobic.002G006900 tetratricopeptide repeat domain containing protein, expressed -
5 Sobic.010G201500 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
6 Sobic.001G241200 protein kinase domain containing protein, expressed -
7 Sobic.007G096600 - -
8 Sobic.010G277500 expressed protein -
9 Sobic.003G119000 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
10 Sobic.003G148000 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
11 Sobic.002G145101 - -
12 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
13 Sobic.008G009700 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
14 Sobic.002G071500 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
15 Sobic.003G059750 - K11797: PHIP, PH-interacting protein
16 Sobic.007G167500 expressed protein -
17 Sobic.004G145500 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
18 Sobic.007G126600 RNA recognition motif containing protein, putative, expressed K12822: RBM25, RNA-binding protein 25
19 Sobic.006G216800 AAA family ATPase, putative, expressed K13339: PEX6, peroxin-6
20 Sobic.008G028700 SET domain containing protein, expressed -


Gene co-expression network
sample Sobic002G191800 Sobic002G191800 Sobic007G065400 Sobic007G065400 Sobic002G191800--Sobic007G065400 Sobic003G372700 Sobic003G372700 Sobic002G191800--Sobic003G372700 Sobic002G180666 Sobic002G180666 Sobic002G191800--Sobic002G180666 Sobic002G006900 Sobic002G006900 Sobic002G191800--Sobic002G006900 Sobic010G201500 Sobic010G201500 Sobic002G191800--Sobic010G201500 Sobic001G241200 Sobic001G241200 Sobic002G191800--Sobic001G241200 Sobic007G096600 Sobic007G096600 Sobic002G191800--Sobic007G096600 Sobic010G277500 Sobic010G277500 Sobic002G191800--Sobic010G277500 Sobic003G119000 Sobic003G119000 Sobic002G191800--Sobic003G119000 Sobic007G065400--Sobic002G006900 Sobic007G065400--Sobic002G191800 Sobic008G009700 Sobic008G009700 Sobic007G065400--Sobic008G009700 Sobic009G040600 Sobic009G040600 Sobic007G065400--Sobic009G040600 Sobic004G145500 Sobic004G145500 Sobic007G065400--Sobic004G145500 Sobic009G210500 Sobic009G210500 Sobic007G065400--Sobic009G210500 Sobic007G065400--Sobic003G119000 Sobic007G065400--Sobic003G372700 Sobic008G028700 Sobic008G028700 Sobic007G065400--Sobic008G028700 Sobic003G372700--Sobic002G006900 Sobic003G372700--Sobic003G119000 Sobic003G372700--Sobic007G065400 Sobic005G112300 Sobic005G112300 Sobic003G372700--Sobic005G112300 Sobic003G372700--Sobic002G191800 Sobic003G372700--Sobic009G040600 Sobic002G309600 Sobic002G309600 Sobic003G372700--Sobic002G309600 Sobic003G280800 Sobic003G280800 Sobic003G372700--Sobic003G280800 Sobic001G474600 Sobic001G474600 Sobic003G372700--Sobic001G474600 Sobic003G148000 Sobic003G148000 Sobic002G180666--Sobic003G148000 Sobic006G032500 Sobic006G032500 Sobic002G180666--Sobic006G032500 Sobic002G145101 Sobic002G145101 Sobic002G180666--Sobic002G145101 Sobic006G048500 Sobic006G048500 Sobic002G180666--Sobic006G048500 Sobic002G343901 Sobic002G343901 Sobic002G180666--Sobic002G343901 Sobic002G180666--Sobic003G372700 Sobic004G007100 Sobic004G007100 Sobic002G180666--Sobic004G007100 Sobic007G161300 Sobic007G161300 Sobic002G180666--Sobic007G161300 Sobic001G456900 Sobic001G456900 Sobic002G180666--Sobic001G456900 Sobic008G047800 Sobic008G047800 Sobic002G006900--Sobic008G047800 Sobic002G006900--Sobic007G065400 Sobic003G200200 Sobic003G200200 Sobic002G006900--Sobic003G200200 Sobic002G006900--Sobic003G372700 Sobic002G006900--Sobic009G040600 Sobic001G155000 Sobic001G155000 Sobic002G006900--Sobic001G155000 Sobic002G006900--Sobic002G309600 Sobic001G214300 Sobic001G214300 Sobic002G006900--Sobic001G214300 Sobic001G512700 Sobic001G512700 Sobic002G006900--Sobic001G512700 Sobic002G071500 Sobic002G071500 Sobic010G201500--Sobic002G071500 Sobic010G201500--Sobic007G065400 Sobic004G271000 Sobic004G271000 Sobic010G201500--Sobic004G271000 Sobic010G201500--Sobic003G372700 Sobic010G201500--Sobic002G006900 Sobic010G201500--Sobic002G191800 Sobic010G065300 Sobic010G065300 Sobic010G201500--Sobic010G065300 Sobic010G069100 Sobic010G069100 Sobic010G201500--Sobic010G069100 Sobic010G201500--Sobic001G155000 Sobic007G117400 Sobic007G117400 Sobic001G241200--Sobic007G117400 Sobic001G241200--Sobic005G112300 Sobic004G065100 Sobic004G065100 Sobic001G241200--Sobic004G065100 Sobic001G241200--Sobic002G309600 Sobic005G008800 Sobic005G008800 Sobic001G241200--Sobic005G008800 Sobic001G241200--Sobic008G009700 Sobic001G154900 Sobic001G154900 Sobic001G241200--Sobic001G154900 Sobic001G241200--Sobic003G119000 Sobic001G540400 Sobic001G540400 Sobic001G241200--Sobic001G540400 Sobic002G243900 Sobic002G243900 Sobic007G096600--Sobic002G243900 Sobic003G268300 Sobic003G268300 Sobic007G096600--Sobic003G268300 Sobic003G176500 Sobic003G176500 Sobic007G096600--Sobic003G176500 Sobic001G274200 Sobic001G274200 Sobic007G096600--Sobic001G274200 Sobic007G096600--Sobic003G200200 Sobic005G144400 Sobic005G144400 Sobic007G096600--Sobic005G144400 Sobic007G096600--Sobic003G148000 Sobic003G332800 Sobic003G332800 Sobic007G096600--Sobic003G332800 Sobic001G420200 Sobic001G420200 Sobic007G096600--Sobic001G420200 Sobic004G208900 Sobic004G208900 Sobic010G277500--Sobic004G208900 Sobic006G209850 Sobic006G209850 Sobic010G277500--Sobic006G209850 Sobic010G277500--Sobic007G065400 Sobic009G260500 Sobic009G260500 Sobic010G277500--Sobic009G260500 Sobic010G277500--Sobic003G280800 Sobic004G009600 Sobic004G009600 Sobic010G277500--Sobic004G009600 Sobic010G277500--Sobic008G028700 Sobic004G258700 Sobic004G258700 Sobic010G277500--Sobic004G258700 Sobic006G216800 Sobic006G216800 Sobic010G277500--Sobic006G216800 Sobic003G119000--Sobic003G372700 Sobic003G119000--Sobic002G071500 Sobic003G119000--Sobic003G280800 Sobic003G119000--Sobic007G065400 Sobic007G167500 Sobic007G167500 Sobic003G119000--Sobic007G167500 Sobic007G126600 Sobic007G126600 Sobic003G119000--Sobic007G126600 Sobic001G511500 Sobic001G511500 Sobic003G119000--Sobic001G511500 Sobic003G119000--Sobic002G309600 Sobic003G119000--Sobic001G241200
Octagon: transcription factors


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