Gene annotation
Transcriptome id Sobic.002G277600.2,Sobic.002G277600.1
Synonym Sb02g031060, XCT
Functional annotation XAP5 family protein, putative, expressed
UniProt A0A1W0W645 , A0A1W0W5Y3
Pfam PF04921
Panther DB PTHR12722
NCBI CDD KOG2894; Uncharacterized conserved protein XAP-5
KEGG Orthology K13119; FAM50, protein FAM50
Gene Ontology GO:0005634; nucleus


Orthologs (automatic annotation)
TAIR AT2G21150 : XAP5 family protein
RAP-DB (Rice) LOC_Os09g36480.1 : XAP5 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a014452
Brachypodium KQJ91221
Barley HORVU5Hr1G082770.9 , HORVU5Hr1G082770.8 , HORVU5Hr1G082770.7 , HORVU5Hr1G082770.6 , HORVU5Hr1G082770.5 , HORVU5Hr1G082770.4 , HORVU5Hr1G082770.3 , HORVU5Hr1G082770.2 , HORVU5Hr1G082770.1
Wheat TraesCS5B02G325900 , TraesCS5B02G325900 , TraesCS5A02G325600 , TraesCS5A02G325600 , TraesCS5D02G331700 , TraesCS5D02G331700
Populus PNT21115 , PNT21116


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cDNA sequences
Sobic.002G277600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G124000 pinin/SDK/memA protein, putative, expressed K13114: pinin
2 Sobic.004G237100 AP2/EREBP transcription factor BABY BOOM, putative, expressed -
3 Sobic.001G375300 ulp1 protease family protein, putative, expressed K08592: sentrin-specific protease 1
4 Sobic.003G160000 SUMO protease, putative, expressed K08592: sentrin-specific protease 1
5 Sobic.001G107900 fip1 motif family protein, expressed -
6 Sobic.009G178800 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
7 Sobic.004G065100 RNA recognition motif, putative, expressed K12842: U2-associated protein SR140
8 Sobic.008G124700 splicing factor, arginine/serine-rich 18, putative, expressed -
9 Sobic.001G090400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
10 Sobic.001G088100 transcriptional adaptor, putative, expressed K11314: TADA2A, transcriptional adapter 2-alpha
11 Sobic.001G029400 RNA-binding motif protein, putative, expressed K13107: RBMX2, RNA-binding motif protein, X-linked 2
12 Sobic.004G264300 nuclear matrix constituent protein 1-like, putative, expressed -
13 Sobic.007G009400 bromodomain domain containing protein, expressed -
14 Sobic.001G360900 peptidyl-prolyl isomerase PASTICCINO1, putative, expressed -
15 Sobic.003G119000 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
16 Sobic.006G165000 RNA recognition motif containing protein, expressed -
17 Sobic.001G542700 expressed protein -
18 Sobic.008G054500 WD domain, G-beta repeat domain containing protein, expressed -
19 Sobic.008G152800 Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
20 Sobic.002G396000 XPA-binding protein 2, putative, expressed K12867: SYF1, pre-mRNA-splicing factor SYF1


Gene co-expression network
sample Sobic002G277600 Sobic002G277600 Sobic001G124000 Sobic001G124000 Sobic002G277600--Sobic001G124000 Sobic004G237100 Sobic004G237100 Sobic002G277600--Sobic004G237100 Sobic001G375300 Sobic001G375300 Sobic002G277600--Sobic001G375300 Sobic003G160000 Sobic003G160000 Sobic002G277600--Sobic003G160000 Sobic001G107900 Sobic001G107900 Sobic002G277600--Sobic001G107900 Sobic009G178800 Sobic009G178800 Sobic002G277600--Sobic009G178800 Sobic004G065100 Sobic004G065100 Sobic002G277600--Sobic004G065100 Sobic008G124700 Sobic008G124700 Sobic002G277600--Sobic008G124700 Sobic001G090400 Sobic001G090400 Sobic002G277600--Sobic001G090400 Sobic009G024400 Sobic009G024400 Sobic001G124000--Sobic009G024400 Sobic004G039200 Sobic004G039200 Sobic001G124000--Sobic004G039200 Sobic008G113100 Sobic008G113100 Sobic001G124000--Sobic008G113100 Sobic004G208900 Sobic004G208900 Sobic001G124000--Sobic004G208900 Sobic001G227200 Sobic001G227200 Sobic001G124000--Sobic001G227200 Sobic007G117400 Sobic007G117400 Sobic001G124000--Sobic007G117400 Sobic009G065100 Sobic009G065100 Sobic001G124000--Sobic009G065100 Sobic010G277500 Sobic010G277500 Sobic001G124000--Sobic010G277500 Sobic008G011100 Sobic008G011100 Sobic001G124000--Sobic008G011100 Sobic001G088100 Sobic001G088100 Sobic004G237100--Sobic001G088100 Sobic004G237100--Sobic001G375300 Sobic004G237100--Sobic002G277600 Sobic005G021500 Sobic005G021500 Sobic004G237100--Sobic005G021500 Sobic004G088200 Sobic004G088200 Sobic004G237100--Sobic004G088200 Sobic005G079800 Sobic005G079800 Sobic004G237100--Sobic005G079800 Sobic004G264300 Sobic004G264300 Sobic004G237100--Sobic004G264300 Sobic002G127100 Sobic002G127100 Sobic004G237100--Sobic002G127100 Sobic004G237100--Sobic001G124000 Sobic001G360900 Sobic001G360900 Sobic001G375300--Sobic001G360900 Sobic001G375300--Sobic001G124000 Sobic001G375300--Sobic004G237100 Sobic001G375300--Sobic002G277600 Sobic008G103200 Sobic008G103200 Sobic001G375300--Sobic008G103200 Sobic003G241800 Sobic003G241800 Sobic001G375300--Sobic003G241800 Sobic009G247400 Sobic009G247400 Sobic001G375300--Sobic009G247400 Sobic007G000100 Sobic007G000100 Sobic001G375300--Sobic007G000100 Sobic001G375300--Sobic008G011100 Sobic006G116100 Sobic006G116100 Sobic003G160000--Sobic006G116100 Sobic010G236400 Sobic010G236400 Sobic003G160000--Sobic010G236400 Sobic003G241200 Sobic003G241200 Sobic003G160000--Sobic003G241200 Sobic008G153000 Sobic008G153000 Sobic003G160000--Sobic008G153000 Sobic010G204400 Sobic010G204400 Sobic003G160000--Sobic010G204400 Sobic007G026000 Sobic007G026000 Sobic003G160000--Sobic007G026000 Sobic004G084700 Sobic004G084700 Sobic003G160000--Sobic004G084700 Sobic001G452000 Sobic001G452000 Sobic003G160000--Sobic001G452000 Sobic006G032400 Sobic006G032400 Sobic003G160000--Sobic006G032400 Sobic001G542700 Sobic001G542700 Sobic001G107900--Sobic001G542700 Sobic004G216500 Sobic004G216500 Sobic001G107900--Sobic004G216500 Sobic009G138800 Sobic009G138800 Sobic001G107900--Sobic009G138800 Sobic001G107900--Sobic004G065100 Sobic008G192600 Sobic008G192600 Sobic001G107900--Sobic008G192600 Sobic001G014100 Sobic001G014100 Sobic001G107900--Sobic001G014100 Sobic001G241200 Sobic001G241200 Sobic001G107900--Sobic001G241200 Sobic001G107900--Sobic007G117400 Sobic001G107900--Sobic002G277600 Sobic002G248400 Sobic002G248400 Sobic009G178800--Sobic002G248400 Sobic008G054500 Sobic008G054500 Sobic009G178800--Sobic008G054500 Sobic002G157000 Sobic002G157000 Sobic009G178800--Sobic002G157000 Sobic006G183800 Sobic006G183800 Sobic009G178800--Sobic006G183800 Sobic009G178800--Sobic006G032400 Sobic002G320500 Sobic002G320500 Sobic009G178800--Sobic002G320500 Sobic001G420200 Sobic001G420200 Sobic009G178800--Sobic001G420200 Sobic002G144933 Sobic002G144933 Sobic009G178800--Sobic002G144933 Sobic003G084900 Sobic003G084900 Sobic009G178800--Sobic003G084900 Sobic004G065100--Sobic001G241200 Sobic002G309600 Sobic002G309600 Sobic004G065100--Sobic002G309600 Sobic004G065100--Sobic007G117400 Sobic003G119000 Sobic003G119000 Sobic004G065100--Sobic003G119000 Sobic005G027400 Sobic005G027400 Sobic004G065100--Sobic005G027400 Sobic001G154900 Sobic001G154900 Sobic004G065100--Sobic001G154900 Sobic005G008800 Sobic005G008800 Sobic004G065100--Sobic005G008800 Sobic005G104500 Sobic005G104500 Sobic004G065100--Sobic005G104500 Sobic005G112300 Sobic005G112300 Sobic004G065100--Sobic005G112300 Sobic010G101800 Sobic010G101800 Sobic008G124700--Sobic010G101800 Sobic008G124700--Sobic001G124000 Sobic007G167500 Sobic007G167500 Sobic008G124700--Sobic007G167500 Sobic001G107500 Sobic001G107500 Sobic008G124700--Sobic001G107500 Sobic006G200600 Sobic006G200600 Sobic008G124700--Sobic006G200600 Sobic003G184699 Sobic003G184699 Sobic008G124700--Sobic003G184699 Sobic001G016000 Sobic001G016000 Sobic008G124700--Sobic001G016000 Sobic006G133800 Sobic006G133800 Sobic008G124700--Sobic006G133800 Sobic009G210500 Sobic009G210500 Sobic008G124700--Sobic009G210500 Sobic008G067600 Sobic008G067600 Sobic001G090400--Sobic008G067600 Sobic006G173100 Sobic006G173100 Sobic001G090400--Sobic006G173100 Sobic004G057400 Sobic004G057400 Sobic001G090400--Sobic004G057400 Sobic001G176200 Sobic001G176200 Sobic001G090400--Sobic001G176200 Sobic001G090400--Sobic002G320500 Sobic009G000500 Sobic009G000500 Sobic001G090400--Sobic009G000500 Sobic002G157300 Sobic002G157300 Sobic001G090400--Sobic002G157300 Sobic004G205600 Sobic004G205600 Sobic001G090400--Sobic004G205600 Sobic001G090400--Sobic002G248400
Octagon: transcription factors


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