Gene annotation
Transcriptome id Sobic.010G127100.1
Synonym
Functional annotation -
UniProt A0A194YIR7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G119400 - -
2 Sobic.008G069700 clathrin assembly protein, putative, expressed -
3 Sobic.001G171600 PPR repeat containing protein, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
4 Sobic.009G204400 M-phase phosphoprotein 10, putative, expressed K14559: U3 small nucleolar RNA-associated protein MPP10
5 Sobic.006G086600 IKI3 family protein, expressed K11373: ELP1, IKI3, elongator complex protein 1
6 Sobic.007G220300 WD domain, G-beta repeat domain containing protein, expressed K11374: elongator complex protein 2
7 Sobic.003G032700 - -
8 Sobic.K025800 - -
9 Sobic.008G014801 - -
10 Sobic.003G185400 - -
11 Sobic.010G102600 pentatricopeptide, putative, expressed -
12 Sobic.010G055700 tetratricopeptide repeat domain containing protein, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
13 Sobic.010G007100 AAA family ATPase, putative, expressed K14571: RIX7, ribosome biogenesis ATPase
14 Sobic.002G235200 PPR repeat domain containing protein, putative, expressed -
15 Sobic.001G376900 utp14 protein, putative, expressed K14567: U3 small nucleolar RNA-associated protein 14
16 Sobic.003G171500 dnaJ domain containing protein, expressed -
17 Sobic.006G208500 proteasome/cyclosome repeat containing protein, expressed K03032: PSMD1, 26S proteasome regulatory subunit N2
18 Sobic.003G006400 metallo-beta-lactamase family protein, putative, expressed K00784: ribonuclease Z
19 Sobic.004G320500 expressed protein K14794: ribosomal RNA-processing protein 12
20 Sobic.002G275600 RFC1 - Putative clamp loader of PCNA, replication factor C subunit 1, expressed K10754: replication factor C subunit 1


Gene co-expression network
sample Sobic010G127100 Sobic010G127100 Sobic010G119400 Sobic010G119400 Sobic010G127100--Sobic010G119400 Sobic008G069700 Sobic008G069700 Sobic010G127100--Sobic008G069700 Sobic001G171600 Sobic001G171600 Sobic010G127100--Sobic001G171600 Sobic009G204400 Sobic009G204400 Sobic010G127100--Sobic009G204400 Sobic006G086600 Sobic006G086600 Sobic010G127100--Sobic006G086600 Sobic007G220300 Sobic007G220300 Sobic010G127100--Sobic007G220300 Sobic003G032700 Sobic003G032700 Sobic010G127100--Sobic003G032700 SobicK025800 SobicK025800 Sobic010G127100--SobicK025800 Sobic008G014801 Sobic008G014801 Sobic010G127100--Sobic008G014801 Sobic010G119400--Sobic010G127100 Sobic004G224600 Sobic004G224600 Sobic010G119400--Sobic004G224600 Sobic010G119400--SobicK025800 Sobic002G171300 Sobic002G171300 Sobic010G119400--Sobic002G171300 Sobic010G055700 Sobic010G055700 Sobic010G119400--Sobic010G055700 Sobic008G160000 Sobic008G160000 Sobic010G119400--Sobic008G160000 Sobic006G178100 Sobic006G178100 Sobic010G119400--Sobic006G178100 Sobic001G376900 Sobic001G376900 Sobic010G119400--Sobic001G376900 Sobic002G235200 Sobic002G235200 Sobic010G119400--Sobic002G235200 Sobic008G069700--Sobic001G171600 Sobic008G069700--Sobic007G220300 Sobic008G069700--Sobic010G127100 Sobic008G069700--Sobic008G014801 Sobic005G106101 Sobic005G106101 Sobic008G069700--Sobic005G106101 Sobic008G069700--Sobic001G376900 Sobic008G069700--Sobic006G086600 Sobic001G251400 Sobic001G251400 Sobic008G069700--Sobic001G251400 Sobic002G373950 Sobic002G373950 Sobic008G069700--Sobic002G373950 Sobic001G171600--Sobic006G086600 Sobic001G171600--Sobic007G220300 Sobic003G171500 Sobic003G171500 Sobic001G171600--Sobic003G171500 Sobic001G214600 Sobic001G214600 Sobic001G171600--Sobic001G214600 Sobic005G137700 Sobic005G137700 Sobic001G171600--Sobic005G137700 Sobic001G171600--Sobic009G204400 Sobic001G089600 Sobic001G089600 Sobic001G171600--Sobic001G089600 Sobic001G334700 Sobic001G334700 Sobic001G171600--Sobic001G334700 Sobic001G171600--Sobic002G373950 Sobic009G204400--Sobic001G171600 Sobic001G274900 Sobic001G274900 Sobic009G204400--Sobic001G274900 Sobic010G276900 Sobic010G276900 Sobic009G204400--Sobic010G276900 Sobic003G258900 Sobic003G258900 Sobic009G204400--Sobic003G258900 Sobic010G007100 Sobic010G007100 Sobic009G204400--Sobic010G007100 Sobic009G204400--Sobic006G086600 Sobic002G275600 Sobic002G275600 Sobic009G204400--Sobic002G275600 Sobic004G320500 Sobic004G320500 Sobic009G204400--Sobic004G320500 Sobic001G014100 Sobic001G014100 Sobic009G204400--Sobic001G014100 Sobic010G003400 Sobic010G003400 Sobic006G086600--Sobic010G003400 Sobic001G145400 Sobic001G145400 Sobic006G086600--Sobic001G145400 Sobic006G086600--Sobic001G089600 Sobic009G101200 Sobic009G101200 Sobic006G086600--Sobic009G101200 Sobic001G453400 Sobic001G453400 Sobic006G086600--Sobic001G453400 Sobic006G086600--Sobic004G320500 Sobic006G086600--Sobic002G235200 Sobic006G086600--Sobic007G220300 Sobic006G086600--Sobic010G007100 Sobic007G220300--Sobic006G086600 Sobic008G131000 Sobic008G131000 Sobic007G220300--Sobic008G131000 Sobic002G317200 Sobic002G317200 Sobic007G220300--Sobic002G317200 Sobic007G220300--Sobic001G334700 Sobic007G220300--Sobic001G171600 Sobic004G332400 Sobic004G332400 Sobic007G220300--Sobic004G332400 Sobic001G081000 Sobic001G081000 Sobic007G220300--Sobic001G081000 Sobic007G220300--Sobic003G171500 Sobic007G207200 Sobic007G207200 Sobic007G220300--Sobic007G207200 Sobic003G032700--Sobic001G089600 Sobic003G032700--Sobic003G171500 Sobic003G166750 Sobic003G166750 Sobic003G032700--Sobic003G166750 Sobic004G089000 Sobic004G089000 Sobic003G032700--Sobic004G089000 Sobic006G216100 Sobic006G216100 Sobic003G032700--Sobic006G216100 Sobic010G115400 Sobic010G115400 Sobic003G032700--Sobic010G115400 Sobic010G102600 Sobic010G102600 Sobic003G032700--Sobic010G102600 Sobic003G095900 Sobic003G095900 Sobic003G032700--Sobic003G095900 Sobic001G111850 Sobic001G111850 Sobic003G032700--Sobic001G111850 Sobic006G043400 Sobic006G043400 SobicK025800--Sobic006G043400 Sobic001G066500 Sobic001G066500 SobicK025800--Sobic001G066500 Sobic006G247900 Sobic006G247900 SobicK025800--Sobic006G247900 SobicK025800--Sobic010G055700 SobicK025800--Sobic008G014801 SobicK025800--Sobic003G032700 SobicK025800--Sobic003G171500 SobicK025800--Sobic010G102600 SobicK025800--Sobic001G111850 Sobic008G014801--Sobic010G102600 Sobic001G052400 Sobic001G052400 Sobic008G014801--Sobic001G052400 Sobic008G014801--Sobic001G376900 Sobic003G441900 Sobic003G441900 Sobic008G014801--Sobic003G441900 Sobic008G014801--Sobic004G320500 Sobic008G014801--Sobic003G032700 Sobic001G455600 Sobic001G455600 Sobic008G014801--Sobic001G455600 Sobic008G014801--Sobic003G171500 Sobic008G063300 Sobic008G063300 Sobic008G014801--Sobic008G063300
Octagon: transcription factors


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