Gene annotation
Transcriptome id Sobic.009G222600.2,Sobic.009G222600.1
Synonym Sb09g027650
Functional annotation expressed protein
UniProt C5YV19
Pfam PF07797
Panther DB PTHR33130 PTHR33130:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G60410 : Protein of unknown function (DUF1639)
RAP-DB (Rice) LOC_Os05g47810.1 : expressed protein
MaizeGDB (Corn) Zm00025a044470 , Zm00025a038852 , Zm00025a036530 , Zm00025a027975
Brachypodium PNT72610 , KQK05023
Barley HORVU1Hr1G083300.8 , HORVU1Hr1G083300.2
Wheat TraesCS1B02G395200 , TraesCS1D02G382200 , TraesCS1A02G375000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G055600 prenylated rab acceptor, putative, expressed -
2 Sobic.010G204600 SNF7 domain containing protein, putative, expressed K12197: CHMP1, VPS46, charged multivesicular body protein 1
3 Sobic.001G095300 prenylated rab acceptor, putative, expressed -
4 Sobic.001G422900 zinc finger family protein, putative, expressed -
5 Sobic.002G245800 AN1-like zinc finger domain containing protein, expressed -
6 Sobic.004G247200 erwinia induced protein 2, putative, expressed -
7 Sobic.001G204900 cystathionin beta synthase protein, putative, expressed -
8 Sobic.001G192600 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
9 Sobic.006G158266 - -
10 Sobic.004G259600 slowmo homolog, putative, expressed -
11 Sobic.003G324400 Not investigated(PubMedID : 23766026)@Contribute to rice salt tolerance under a salt inducible abscisic acid 2 (ABA2) promoter(PubMedID : 28393269)@AP2 domain containing protein, expressed -
12 Sobic.006G263600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.002G405600 early response to dehydration 15, putative, expressed -
14 Sobic.003G364600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
15 Sobic.001G037000 PHD finger protein, putative, expressed -
16 Sobic.005G229700 GRAS family transcription factor domain containing protein, expressed -
17 Sobic.003G063200 uncharacterized Cys-rich domain containing protein, putative, expressed -
18 Sobic.001G449700 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
19 Sobic.009G247900 similar to Putative late embryogenesis abundant protein(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
20 Sobic.001G067601 - K17553: protein phosphatase 1 regulatory subunit 11


Gene co-expression network
sample Sobic009G222600 Sobic009G222600 Sobic001G055600 Sobic001G055600 Sobic009G222600--Sobic001G055600 Sobic010G204600 Sobic010G204600 Sobic009G222600--Sobic010G204600 Sobic001G095300 Sobic001G095300 Sobic009G222600--Sobic001G095300 Sobic001G422900 Sobic001G422900 Sobic009G222600--Sobic001G422900 Sobic002G245800 Sobic002G245800 Sobic009G222600--Sobic002G245800 Sobic004G247200 Sobic004G247200 Sobic009G222600--Sobic004G247200 Sobic001G204900 Sobic001G204900 Sobic009G222600--Sobic001G204900 Sobic001G192600 Sobic001G192600 Sobic009G222600--Sobic001G192600 Sobic006G158266 Sobic006G158266 Sobic009G222600--Sobic006G158266 Sobic001G390300 Sobic001G390300 Sobic001G055600--Sobic001G390300 Sobic007G074000 Sobic007G074000 Sobic001G055600--Sobic007G074000 Sobic002G407900 Sobic002G407900 Sobic001G055600--Sobic002G407900 Sobic009G159400 Sobic009G159400 Sobic001G055600--Sobic009G159400 Sobic001G481100 Sobic001G481100 Sobic001G055600--Sobic001G481100 Sobic004G065500 Sobic004G065500 Sobic001G055600--Sobic004G065500 Sobic002G336600 Sobic002G336600 Sobic001G055600--Sobic002G336600 Sobic003G228900 Sobic003G228900 Sobic001G055600--Sobic003G228900 Sobic009G247900 Sobic009G247900 Sobic001G055600--Sobic009G247900 Sobic010G204600--Sobic001G095300 Sobic003G063200 Sobic003G063200 Sobic010G204600--Sobic003G063200 Sobic002G405600 Sobic002G405600 Sobic010G204600--Sobic002G405600 Sobic004G157000 Sobic004G157000 Sobic010G204600--Sobic004G157000 Sobic009G023200 Sobic009G023200 Sobic010G204600--Sobic009G023200 Sobic009G129000 Sobic009G129000 Sobic010G204600--Sobic009G129000 Sobic010G204600--Sobic001G055600 Sobic003G202200 Sobic003G202200 Sobic010G204600--Sobic003G202200 Sobic009G033700 Sobic009G033700 Sobic010G204600--Sobic009G033700 Sobic001G095300--Sobic010G204600 Sobic002G140300 Sobic002G140300 Sobic001G095300--Sobic002G140300 Sobic003G092900 Sobic003G092900 Sobic001G095300--Sobic003G092900 Sobic003G324400 Sobic003G324400 Sobic001G095300--Sobic003G324400 Sobic001G095300--Sobic002G405600 Sobic001G538866 Sobic001G538866 Sobic001G095300--Sobic001G538866 Sobic001G095300--Sobic002G245800 Sobic001G095300--Sobic009G129000 Sobic006G179500 Sobic006G179500 Sobic001G095300--Sobic006G179500 Sobic001G422900--Sobic002G245800 Sobic001G422900--Sobic010G204600 Sobic001G037000 Sobic001G037000 Sobic001G422900--Sobic001G037000 Sobic001G422900--Sobic001G095300 Sobic003G181500 Sobic003G181500 Sobic001G422900--Sobic003G181500 Sobic003G249800 Sobic003G249800 Sobic001G422900--Sobic003G249800 Sobic005G229700 Sobic005G229700 Sobic001G422900--Sobic005G229700 Sobic002G211900 Sobic002G211900 Sobic001G422900--Sobic002G211900 Sobic001G422900--Sobic002G405600 Sobic002G245800--Sobic002G405600 Sobic001G040200 Sobic001G040200 Sobic002G245800--Sobic001G040200 Sobic002G245800--Sobic003G324400 Sobic002G245800--Sobic009G247900 Sobic002G245800--Sobic001G422900 Sobic002G245800--Sobic009G023200 Sobic002G245800--Sobic001G095300 Sobic002G245800--Sobic002G140300 Sobic002G245800--Sobic006G179500 Sobic004G247200--Sobic003G063200 Sobic005G028700 Sobic005G028700 Sobic004G247200--Sobic005G028700 Sobic004G259600 Sobic004G259600 Sobic004G247200--Sobic004G259600 Sobic004G247200--Sobic001G055600 Sobic004G247200--Sobic010G204600 Sobic004G247200--Sobic004G065500 Sobic009G183300 Sobic009G183300 Sobic004G247200--Sobic009G183300 Sobic001G067601 Sobic001G067601 Sobic004G247200--Sobic001G067601 Sobic002G348100 Sobic002G348100 Sobic004G247200--Sobic002G348100 Sobic006G263600 Sobic006G263600 Sobic001G204900--Sobic006G263600 Sobic001G204900--Sobic003G324400 Sobic010G223600 Sobic010G223600 Sobic001G204900--Sobic010G223600 Sobic001G204900--Sobic010G204600 Sobic001G204900--Sobic002G405600 Sobic004G169200 Sobic004G169200 Sobic001G204900--Sobic004G169200 Sobic009G238500 Sobic009G238500 Sobic001G204900--Sobic009G238500 Sobic001G204900--Sobic001G422900 Sobic001G295700 Sobic001G295700 Sobic001G204900--Sobic001G295700 Sobic002G192000 Sobic002G192000 Sobic001G192600--Sobic002G192000 Sobic001G367600 Sobic001G367600 Sobic001G192600--Sobic001G367600 Sobic001G038900 Sobic001G038900 Sobic001G192600--Sobic001G038900 Sobic006G158600 Sobic006G158600 Sobic001G192600--Sobic006G158600 Sobic001G423800 Sobic001G423800 Sobic001G192600--Sobic001G423800 Sobic001G192600--Sobic001G055600 Sobic001G192600--Sobic001G481100 Sobic009G221400 Sobic009G221400 Sobic001G192600--Sobic009G221400 Sobic002G353900 Sobic002G353900 Sobic001G192600--Sobic002G353900 Sobic006G158266--Sobic001G055600 Sobic003G265200 Sobic003G265200 Sobic006G158266--Sobic003G265200 Sobic006G158200 Sobic006G158200 Sobic006G158266--Sobic006G158200 Sobic002G356101 Sobic002G356101 Sobic006G158266--Sobic002G356101 Sobic009G074100 Sobic009G074100 Sobic006G158266--Sobic009G074100 Sobic004G306300 Sobic004G306300 Sobic006G158266--Sobic004G306300 Sobic006G157500 Sobic006G157500 Sobic006G158266--Sobic006G157500 Sobic009G184000 Sobic009G184000 Sobic006G158266--Sobic009G184000 Sobic006G158266--Sobic007G074000
Octagon: transcription factors


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