Gene annotation
Transcriptome id Sobic.009G226700.1
Synonym Sb09g027980
Functional annotation expressed protein
UniProt C5YVE5
Pfam PF10294
Panther DB PTHR14614 PTHR14614:SF33
NCBI CDD KOG2793; Putative N2,N2-dimethylguanosine tRNA methyltransferase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G73320 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os06g01180.1 : expressed protein
MaizeGDB (Corn) Zm00025a044510
Brachypodium KQK20092
Barley HORVU7Hr1G000870.2 , HORVU7Hr1G000870.6 , HORVU7Hr1G000870.3
Wheat TraesCS4A02G499300 , TraesCS7A02G007800 , TraesCS7D02G000500 , TraesCS7A02G528500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G091700 60S ribosomal protein L18a, putative, expressed K02882: RP-L18Ae, large subunit ribosomal protein L18Ae
2 Sobic.006G124300 metalloprotease ATP23, putative, expressed K18156: ATP23, mitochondrial inner membrane protease ATP23
3 Sobic.007G219800 cytochrome c oxidase assembly protein COX15, putative, expressed K02259: COX15, cytochrome c oxidase assembly protein subunit 15
4 Sobic.001G513500 ribosomal protein L7Ae, putative, expressed K12845: SNU13, U4/U6 small nuclear ribonucleoprotein SNU13
5 Sobic.008G094600 - -
6 Sobic.003G233500 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
7 Sobic.001G342200 40S ribosomal protein S15a, putative, expressed K02957: RP-S15Ae, small subunit ribosomal protein S15Ae
8 Sobic.007G220900 ribosomal L9, putative, expressed K02939: RP-L9, MRPL9, large subunit ribosomal protein L9
9 Sobic.001G066700 GLTP domain containing protein, putative, expressed -
10 Sobic.009G211900 expressed protein -
11 Sobic.002G413400 ribosomal protein, putative, expressed K14842: ribosome biogenesis protein NSA2
12 Sobic.004G048700 SCO1 protein homolog, mitochondrial precursor, putative, expressed K07152: protein SCO1
13 Sobic.006G226500 h/ACA ribonucleoprotein complex subunit 3, putative, expressed K11130: NOP10, H/ACA ribonucleoprotein complex subunit 3
14 Sobic.006G203900 vacuolar ATPase G subunit, putative, expressed K02152: ATPeV1G, V-type H+-transporting ATPase subunit G
15 Sobic.004G286100 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
16 Sobic.006G143500 expressed protein -
17 Sobic.001G286300 - -
18 Sobic.009G191600 tesmin/TSO1-like CXC domain containing protein, expressed -
19 Sobic.001G517600 ribosomal L18p/L5e family protein, putative, expressed K02932: RP-L5e, large subunit ribosomal protein L5e
20 Sobic.006G013000 succinate dehydrogenase subunit 3, putative, expressed K00236: SDHC, succinate dehydrogenase (ubiquinone) cytochrome b560 subunit


Gene co-expression network
sample Sobic009G226700 Sobic009G226700 Sobic005G091700 Sobic005G091700 Sobic009G226700--Sobic005G091700 Sobic006G124300 Sobic006G124300 Sobic009G226700--Sobic006G124300 Sobic007G219800 Sobic007G219800 Sobic009G226700--Sobic007G219800 Sobic001G513500 Sobic001G513500 Sobic009G226700--Sobic001G513500 Sobic008G094600 Sobic008G094600 Sobic009G226700--Sobic008G094600 Sobic003G233500 Sobic003G233500 Sobic009G226700--Sobic003G233500 Sobic001G342200 Sobic001G342200 Sobic009G226700--Sobic001G342200 Sobic007G220900 Sobic007G220900 Sobic009G226700--Sobic007G220900 Sobic001G066700 Sobic001G066700 Sobic009G226700--Sobic001G066700 Sobic005G091700--Sobic001G513500 Sobic010G100000 Sobic010G100000 Sobic005G091700--Sobic010G100000 Sobic009G101700 Sobic009G101700 Sobic005G091700--Sobic009G101700 Sobic001G018800 Sobic001G018800 Sobic005G091700--Sobic001G018800 Sobic003G129800 Sobic003G129800 Sobic005G091700--Sobic003G129800 Sobic002G331300 Sobic002G331300 Sobic005G091700--Sobic002G331300 Sobic009G179100 Sobic009G179100 Sobic005G091700--Sobic009G179100 Sobic001G011200 Sobic001G011200 Sobic005G091700--Sobic001G011200 Sobic005G050500 Sobic005G050500 Sobic005G091700--Sobic005G050500 Sobic009G211900 Sobic009G211900 Sobic006G124300--Sobic009G211900 Sobic006G203900 Sobic006G203900 Sobic006G124300--Sobic006G203900 Sobic008G136800 Sobic008G136800 Sobic006G124300--Sobic008G136800 Sobic004G260200 Sobic004G260200 Sobic006G124300--Sobic004G260200 Sobic006G124300--Sobic005G091700 Sobic001G030300 Sobic001G030300 Sobic006G124300--Sobic001G030300 Sobic003G135600 Sobic003G135600 Sobic006G124300--Sobic003G135600 Sobic003G074900 Sobic003G074900 Sobic006G124300--Sobic003G074900 Sobic001G350600 Sobic001G350600 Sobic006G124300--Sobic001G350600 Sobic004G048700 Sobic004G048700 Sobic007G219800--Sobic004G048700 Sobic007G219800--Sobic009G226700 Sobic009G191400 Sobic009G191400 Sobic007G219800--Sobic009G191400 Sobic001G181500 Sobic001G181500 Sobic007G219800--Sobic001G181500 Sobic002G342000 Sobic002G342000 Sobic007G219800--Sobic002G342000 Sobic007G012900 Sobic007G012900 Sobic007G219800--Sobic007G012900 Sobic010G007400 Sobic010G007400 Sobic007G219800--Sobic010G007400 Sobic004G030000 Sobic004G030000 Sobic007G219800--Sobic004G030000 Sobic001G206700 Sobic001G206700 Sobic007G219800--Sobic001G206700 Sobic001G513500--Sobic001G011200 Sobic002G056200 Sobic002G056200 Sobic001G513500--Sobic002G056200 Sobic001G513500--Sobic003G129800 Sobic001G513500--Sobic005G050500 Sobic001G334300 Sobic001G334300 Sobic001G513500--Sobic001G334300 Sobic001G513500--Sobic009G179100 Sobic004G310300 Sobic004G310300 Sobic001G513500--Sobic004G310300 Sobic001G513500--Sobic005G091700 Sobic001G513500--Sobic010G100000 Sobic008G098800 Sobic008G098800 Sobic008G094600--Sobic008G098800 Sobic002G135200 Sobic002G135200 Sobic008G094600--Sobic002G135200 Sobic001G058900 Sobic001G058900 Sobic008G094600--Sobic001G058900 Sobic008G094600--Sobic003G129800 Sobic009G223300 Sobic009G223300 Sobic008G094600--Sobic009G223300 Sobic001G517600 Sobic001G517600 Sobic008G094600--Sobic001G517600 Sobic008G100000 Sobic008G100000 Sobic008G094600--Sobic008G100000 Sobic008G094600--Sobic001G513500 Sobic001G286300 Sobic001G286300 Sobic008G094600--Sobic001G286300 Sobic003G072300 Sobic003G072300 Sobic003G233500--Sobic003G072300 Sobic001G403500 Sobic001G403500 Sobic003G233500--Sobic001G403500 Sobic003G233500--Sobic002G135200 Sobic004G198400 Sobic004G198400 Sobic003G233500--Sobic004G198400 Sobic002G081600 Sobic002G081600 Sobic003G233500--Sobic002G081600 Sobic006G213000 Sobic006G213000 Sobic003G233500--Sobic006G213000 Sobic010G204500 Sobic010G204500 Sobic003G233500--Sobic010G204500 Sobic003G233500--Sobic002G056200 Sobic002G379500 Sobic002G379500 Sobic003G233500--Sobic002G379500 Sobic001G057300 Sobic001G057300 Sobic001G342200--Sobic001G057300 Sobic001G060300 Sobic001G060300 Sobic001G342200--Sobic001G060300 Sobic007G177200 Sobic007G177200 Sobic001G342200--Sobic007G177200 Sobic007G115100 Sobic007G115100 Sobic001G342200--Sobic007G115100 Sobic007G092100 Sobic007G092100 Sobic001G342200--Sobic007G092100 Sobic010G008800 Sobic010G008800 Sobic001G342200--Sobic010G008800 Sobic004G170400 Sobic004G170400 Sobic001G342200--Sobic004G170400 Sobic001G074700 Sobic001G074700 Sobic001G342200--Sobic001G074700 Sobic001G031900 Sobic001G031900 Sobic001G342200--Sobic001G031900 Sobic001G481700 Sobic001G481700 Sobic007G220900--Sobic001G481700 Sobic002G101000 Sobic002G101000 Sobic007G220900--Sobic002G101000 Sobic007G220900--Sobic010G100000 Sobic007G220900--Sobic001G513500 Sobic009G104100 Sobic009G104100 Sobic007G220900--Sobic009G104100 Sobic007G220900--Sobic009G179100 Sobic007G220900--Sobic008G094600 Sobic001G025600 Sobic001G025600 Sobic007G220900--Sobic001G025600 Sobic007G220900--Sobic001G030300 Sobic003G358300 Sobic003G358300 Sobic001G066700--Sobic003G358300 Sobic003G403400 Sobic003G403400 Sobic001G066700--Sobic003G403400 Sobic002G218000 Sobic002G218000 Sobic001G066700--Sobic002G218000 Sobic005G111100 Sobic005G111100 Sobic001G066700--Sobic005G111100 Sobic009G191600 Sobic009G191600 Sobic001G066700--Sobic009G191600 Sobic010G266300 Sobic010G266300 Sobic001G066700--Sobic010G266300 Sobic001G066700--Sobic003G233500 Sobic010G225300 Sobic010G225300 Sobic001G066700--Sobic010G225300 Sobic009G070200 Sobic009G070200 Sobic001G066700--Sobic009G070200
Octagon: transcription factors


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