Gene annotation
Transcriptome id Sobic.009G233200.2,Sobic.009G233200.4,Sobic.009G233200.5,Sobic.009G233200.3
Synonym Sb09g028570, ATSPS1F, SPS1F, SPS4;SPS;SPS4
Functional annotation Sucrose phosphate synthase genes (PubMedID : 24456189)
sucrose phosphate synthase (PubMedID : 26616172)
Sugar synthesis (PubMedID : 27330561)
sucrose-phosphate synthase, putative, expressed
UniProt A0A1Z5R3R6 , C5YVK9
Pfam PF00862 PF05116 PF00534
Panther DB PTHR12526 PTHR12526:SF334
NCBI CDD KOG0853; Glycosyltransferase
KEGG Orthology K00696; sucrose-phosphate synthase
Gene Ontology GO:0016157; sucrose synthase activity GO:0005985sucrose metabolic process


Orthologs (automatic annotation)
TAIR AT5G20280 : sucrose phosphate synthase 1F
RAP-DB (Rice) LOC_Os08g20660.2,LOC_Os08g20660.1 : sucrose-phosphate synthase, putative, expressed
MaizeGDB (Corn) Zm00025a051399 , Zm00025a030781
Brachypodium KQJ95996
Barley HORVU3Hr1G113420.1 , HORVU1Hr1G075870.1 , HORVU3Hr1G002280.1 , HORVU3Hr1G002280.3 , HORVU3Hr1G002280.2 , HORVU3Hr1G002280.5 , HORVU3Hr1G002280.4 , HORVU3Hr1G002280.7 , HORVU3Hr1G002280.6 , HORVU3Hr1G002280.8 , HORVU5Hr1G122020.1
Wheat TraesCSU02G044500 , TraesCSU02G044500 , TraesCS3D02G013000 , TraesCS3D02G013000 , TraesCS3A02G015500 , TraesCS3A02G015500
Populus -


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cDNA sequences
Sobic.009G233200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G344901 - K10357: myosin V
2 Sobic.004G358400 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
3 Sobic.004G322400 WD40-like, putative, expressed -
4 Sobic.003G337300 HEAT repeat family protein, putative, expressed K08876: SCY1-like protein 1
5 Sobic.010G275500 EF hand family protein, putative, expressed -
6 Sobic.006G131000 expressed protein K11968: ariadne-1
7 Sobic.005G003300 clathrin heavy chain, putative, expressed K04646: clathrin heavy chain
8 Sobic.008G040700 mRNA-decapping enzyme, putative, expressed K12611: mRNA-decapping enzyme 1B
9 Sobic.002G042600 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
10 Sobic.004G004300 expressed protein -
11 Sobic.001G127200 zinc finger family protein, putative, expressed -
12 Sobic.006G208500 proteasome/cyclosome repeat containing protein, expressed K03032: PSMD1, 26S proteasome regulatory subunit N2
13 Sobic.006G267600 elongation factor Tu, putative, expressed K14416: elongation factor 1 alpha-like protein
14 Sobic.001G287500 heat shock protein DnaJ, putative, expressed K09533: DnaJ homolog subfamily C member 13
15 Sobic.005G216300 RNA recognition motif containing protein, expressed K12837: splicing factor U2AF 65 kDa subunit
16 Sobic.001G534800 Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@adapitin protein, putative, expressed K11824: AP-2 complex subunit alpha
17 Sobic.004G088501 - K17302: COPB2, coatomer subunit beta'
18 Sobic.001G404600 expressed protein K18270: Rab3 GTPase-activating protein catalytic subunit
19 Sobic.002G137400 protein binding protein, putative, expressed -
20 Sobic.001G281100 START domain containing protein, expressed -


Gene co-expression network
sample Sobic009G233200 Sobic009G233200 Sobic004G344901 Sobic004G344901 Sobic009G233200--Sobic004G344901 Sobic004G358400 Sobic004G358400 Sobic009G233200--Sobic004G358400 Sobic004G322400 Sobic004G322400 Sobic009G233200--Sobic004G322400 Sobic003G337300 Sobic003G337300 Sobic009G233200--Sobic003G337300 Sobic010G275500 Sobic010G275500 Sobic009G233200--Sobic010G275500 Sobic006G131000 Sobic006G131000 Sobic009G233200--Sobic006G131000 Sobic005G003300 Sobic005G003300 Sobic009G233200--Sobic005G003300 Sobic008G040700 Sobic008G040700 Sobic009G233200--Sobic008G040700 Sobic002G042600 Sobic002G042600 Sobic009G233200--Sobic002G042600 Sobic003G331400 Sobic003G331400 Sobic004G344901--Sobic003G331400 Sobic004G344901--Sobic003G337300 Sobic001G163400 Sobic001G163400 Sobic004G344901--Sobic001G163400 Sobic004G344901--Sobic006G131000 Sobic004G004300 Sobic004G004300 Sobic004G344901--Sobic004G004300 Sobic001G415300 Sobic001G415300 Sobic004G344901--Sobic001G415300 Sobic008G003700 Sobic008G003700 Sobic004G344901--Sobic008G003700 Sobic001G281100 Sobic001G281100 Sobic004G344901--Sobic001G281100 Sobic002G137400 Sobic002G137400 Sobic004G344901--Sobic002G137400 Sobic004G358400--Sobic004G004300 Sobic005G026200 Sobic005G026200 Sobic004G358400--Sobic005G026200 Sobic004G358400--Sobic001G281100 Sobic004G358400--Sobic010G275500 Sobic001G534800 Sobic001G534800 Sobic004G358400--Sobic001G534800 Sobic004G358400--Sobic003G331400 Sobic004G358400--Sobic004G344901 Sobic001G196500 Sobic001G196500 Sobic004G358400--Sobic001G196500 Sobic001G251200 Sobic001G251200 Sobic004G358400--Sobic001G251200 Sobic002G401500 Sobic002G401500 Sobic004G322400--Sobic002G401500 Sobic004G322400--Sobic002G042600 Sobic009G131300 Sobic009G131300 Sobic004G322400--Sobic009G131300 Sobic010G223100 Sobic010G223100 Sobic004G322400--Sobic010G223100 Sobic008G124800 Sobic008G124800 Sobic004G322400--Sobic008G124800 Sobic002G179400 Sobic002G179400 Sobic004G322400--Sobic002G179400 Sobic010G059500 Sobic010G059500 Sobic004G322400--Sobic010G059500 Sobic001G065100 Sobic001G065100 Sobic004G322400--Sobic001G065100 Sobic004G322400--Sobic010G275500 Sobic003G104000 Sobic003G104000 Sobic003G337300--Sobic003G104000 Sobic010G004100 Sobic010G004100 Sobic003G337300--Sobic010G004100 Sobic003G337300--Sobic002G137400 Sobic004G039600 Sobic004G039600 Sobic003G337300--Sobic004G039600 Sobic003G337300--Sobic006G131000 Sobic003G337300--Sobic004G344901 Sobic003G337300--Sobic004G322400 Sobic003G332500 Sobic003G332500 Sobic003G337300--Sobic003G332500 Sobic003G337300--Sobic001G415300 Sobic010G053800 Sobic010G053800 Sobic010G275500--Sobic010G053800 Sobic004G072100 Sobic004G072100 Sobic010G275500--Sobic004G072100 Sobic006G012500 Sobic006G012500 Sobic010G275500--Sobic006G012500 Sobic001G155000 Sobic001G155000 Sobic010G275500--Sobic001G155000 Sobic010G116600 Sobic010G116600 Sobic010G275500--Sobic010G116600 Sobic010G069100 Sobic010G069100 Sobic010G275500--Sobic010G069100 Sobic009G119000 Sobic009G119000 Sobic010G275500--Sobic009G119000 Sobic007G183900 Sobic007G183900 Sobic010G275500--Sobic007G183900 Sobic002G397500 Sobic002G397500 Sobic010G275500--Sobic002G397500 Sobic007G218000 Sobic007G218000 Sobic006G131000--Sobic007G218000 Sobic007G132100 Sobic007G132100 Sobic006G131000--Sobic007G132100 Sobic006G163800 Sobic006G163800 Sobic006G131000--Sobic006G163800 Sobic006G131000--Sobic004G039600 Sobic001G096000 Sobic001G096000 Sobic006G131000--Sobic001G096000 Sobic006G174850 Sobic006G174850 Sobic006G131000--Sobic006G174850 Sobic006G131000--Sobic010G275500 Sobic001G369000 Sobic001G369000 Sobic006G131000--Sobic001G369000 Sobic004G178200 Sobic004G178200 Sobic006G131000--Sobic004G178200 Sobic005G003300--Sobic001G534800 Sobic005G003300--Sobic005G026200 Sobic004G135400 Sobic004G135400 Sobic005G003300--Sobic004G135400 Sobic005G003300--Sobic004G004300 Sobic008G004600 Sobic008G004600 Sobic005G003300--Sobic008G004600 Sobic006G126100 Sobic006G126100 Sobic005G003300--Sobic006G126100 Sobic005G003300--Sobic008G003700 Sobic008G099800 Sobic008G099800 Sobic005G003300--Sobic008G099800 Sobic005G003300--Sobic004G039600 Sobic003G227100 Sobic003G227100 Sobic008G040700--Sobic003G227100 Sobic003G240700 Sobic003G240700 Sobic008G040700--Sobic003G240700 Sobic004G145000 Sobic004G145000 Sobic008G040700--Sobic004G145000 Sobic008G040700--Sobic003G104000 Sobic003G194100 Sobic003G194100 Sobic008G040700--Sobic003G194100 SobicK004100 SobicK004100 Sobic008G040700--SobicK004100 Sobic001G003500 Sobic001G003500 Sobic008G040700--Sobic001G003500 Sobic003G099300 Sobic003G099300 Sobic008G040700--Sobic003G099300 Sobic003G050900 Sobic003G050900 Sobic008G040700--Sobic003G050900 Sobic002G042600--Sobic001G065100 Sobic006G184900 Sobic006G184900 Sobic002G042600--Sobic006G184900 Sobic008G098900 Sobic008G098900 Sobic002G042600--Sobic008G098900 Sobic002G042600--Sobic002G401500 Sobic002G042600--Sobic002G179400 Sobic002G042600--Sobic004G322400 Sobic002G429300 Sobic002G429300 Sobic002G042600--Sobic002G429300 Sobic008G088872 Sobic008G088872 Sobic002G042600--Sobic008G088872 Sobic001G370900 Sobic001G370900 Sobic002G042600--Sobic001G370900
Octagon: transcription factors


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