Gene annotation
Transcriptome id Sobic.010G044300.1
Synonym
Functional annotation expressed protein
UniProt A0A194YH89
Pfam -
Panther DB PTHR33869:SF3 PTHR33869
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g15200.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G430950 - -
2 Sobic.006G245500 down-regulated TF in developmental senescence(PubMedID : 27586543)@AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
3 Sobic.010G006100 expressed protein -
4 Sobic.001G197800 - -
5 Sobic.003G249900 metallo-beta-lactamase family protein, putative, expressed K17725: sulfur dioxygenase
6 Sobic.008G140300 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
7 Sobic.002G231000 GRAM domain containing protein, expressed -
8 Sobic.001G205800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lanC-like protein 2, putative, expressed -
9 Sobic.007G135201 - -
10 Sobic.004G222900 - -
11 Sobic.008G135500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.003G386800 auxin-responsive protein, putative, expressed -
13 Sobic.009G021600 Jacalin-like lectin domain containing protein, putative, expressed -
14 Sobic.002G242300 (54.2% identity with SbCCoAOMT/70.2% similarity)(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed K00588: caffeoyl-CoA O-methyltransferase
15 Sobic.007G067350 - -
16 Sobic.008G170500 AGC_PVPK_like_kin82y.20 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
17 Sobic.003G128700 flavin monooxygenase, putative, expressed -
18 Sobic.003G011800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@3-methyl-2-oxobutanoate hydroxymethyltransferase, putative, expressed K00606: 3-methyl-2-oxobutanoate hydroxymethyltransferase
19 Sobic.003G426100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.001G348700 - -


Gene co-expression network
sample Sobic010G044300 Sobic010G044300 Sobic003G430950 Sobic003G430950 Sobic010G044300--Sobic003G430950 Sobic006G245500 Sobic006G245500 Sobic010G044300--Sobic006G245500 Sobic010G006100 Sobic010G006100 Sobic010G044300--Sobic010G006100 Sobic001G197800 Sobic001G197800 Sobic010G044300--Sobic001G197800 Sobic003G249900 Sobic003G249900 Sobic010G044300--Sobic003G249900 Sobic008G140300 Sobic008G140300 Sobic010G044300--Sobic008G140300 Sobic002G231000 Sobic002G231000 Sobic010G044300--Sobic002G231000 Sobic001G205800 Sobic001G205800 Sobic010G044300--Sobic001G205800 Sobic007G135201 Sobic007G135201 Sobic010G044300--Sobic007G135201 Sobic003G430950--Sobic010G044300 Sobic001G349000 Sobic001G349000 Sobic003G430950--Sobic001G349000 Sobic008G082200 Sobic008G082200 Sobic003G430950--Sobic008G082200 Sobic003G430950--Sobic003G249900 Sobic003G430950--Sobic010G006100 Sobic002G290500 Sobic002G290500 Sobic003G430950--Sobic002G290500 Sobic002G310500 Sobic002G310500 Sobic003G430950--Sobic002G310500 Sobic003G430950--Sobic006G245500 Sobic004G133500 Sobic004G133500 Sobic003G430950--Sobic004G133500 Sobic008G170500 Sobic008G170500 Sobic006G245500--Sobic008G170500 Sobic003G128700 Sobic003G128700 Sobic006G245500--Sobic003G128700 Sobic003G300900 Sobic003G300900 Sobic006G245500--Sobic003G300900 Sobic008G034300 Sobic008G034300 Sobic006G245500--Sobic008G034300 Sobic010G090100 Sobic010G090100 Sobic006G245500--Sobic010G090100 Sobic006G245500--Sobic001G205800 Sobic001G397100 Sobic001G397100 Sobic006G245500--Sobic001G397100 Sobic008G135500 Sobic008G135500 Sobic006G245500--Sobic008G135500 Sobic006G245500--Sobic001G197800 Sobic007G148000 Sobic007G148000 Sobic010G006100--Sobic007G148000 Sobic005G203100 Sobic005G203100 Sobic010G006100--Sobic005G203100 Sobic003G176350 Sobic003G176350 Sobic010G006100--Sobic003G176350 Sobic010G006100--Sobic002G310500 Sobic003G426100 Sobic003G426100 Sobic010G006100--Sobic003G426100 Sobic009G016300 Sobic009G016300 Sobic010G006100--Sobic009G016300 Sobic010G006100--Sobic007G135201 Sobic007G066932 Sobic007G066932 Sobic010G006100--Sobic007G066932 Sobic003G255500 Sobic003G255500 Sobic010G006100--Sobic003G255500 Sobic008G075350 Sobic008G075350 Sobic001G197800--Sobic008G075350 Sobic001G386600 Sobic001G386600 Sobic001G197800--Sobic001G386600 Sobic001G197800--Sobic010G090100 Sobic003G019400 Sobic003G019400 Sobic001G197800--Sobic003G019400 Sobic001G197800--Sobic008G170500 Sobic004G347500 Sobic004G347500 Sobic001G197800--Sobic004G347500 Sobic001G296700 Sobic001G296700 Sobic001G197800--Sobic001G296700 Sobic006G013300 Sobic006G013300 Sobic001G197800--Sobic006G013300 Sobic002G232900 Sobic002G232900 Sobic001G197800--Sobic002G232900 Sobic005G080900 Sobic005G080900 Sobic003G249900--Sobic005G080900 Sobic004G274900 Sobic004G274900 Sobic003G249900--Sobic004G274900 Sobic006G260300 Sobic006G260300 Sobic003G249900--Sobic006G260300 Sobic010G257100 Sobic010G257100 Sobic003G249900--Sobic010G257100 Sobic008G025600 Sobic008G025600 Sobic003G249900--Sobic008G025600 Sobic003G072300 Sobic003G072300 Sobic003G249900--Sobic003G072300 Sobic002G092200 Sobic002G092200 Sobic003G249900--Sobic002G092200 Sobic001G368800 Sobic001G368800 Sobic003G249900--Sobic001G368800 Sobic006G261900 Sobic006G261900 Sobic003G249900--Sobic006G261900 Sobic007G067350 Sobic007G067350 Sobic008G140300--Sobic007G067350 Sobic001G348700 Sobic001G348700 Sobic008G140300--Sobic001G348700 Sobic006G084600 Sobic006G084600 Sobic008G140300--Sobic006G084600 Sobic002G183100 Sobic002G183100 Sobic008G140300--Sobic002G183100 Sobic007G067400 Sobic007G067400 Sobic008G140300--Sobic007G067400 Sobic004G221500 Sobic004G221500 Sobic008G140300--Sobic004G221500 Sobic008G140300--Sobic007G066932 Sobic010G084600 Sobic010G084600 Sobic008G140300--Sobic010G084600 Sobic010G084300 Sobic010G084300 Sobic008G140300--Sobic010G084300 Sobic009G152600 Sobic009G152600 Sobic002G231000--Sobic009G152600 Sobic002G231000--Sobic001G205800 Sobic002G231000--Sobic003G249900 Sobic010G221800 Sobic010G221800 Sobic002G231000--Sobic010G221800 Sobic003G210100 Sobic003G210100 Sobic002G231000--Sobic003G210100 Sobic004G315300 Sobic004G315300 Sobic002G231000--Sobic004G315300 Sobic003G386800 Sobic003G386800 Sobic002G231000--Sobic003G386800 Sobic004G106600 Sobic004G106600 Sobic002G231000--Sobic004G106600 Sobic002G074200 Sobic002G074200 Sobic002G231000--Sobic002G074200 Sobic001G205800--Sobic008G170500 Sobic001G385900 Sobic001G385900 Sobic001G205800--Sobic001G385900 Sobic001G205800--Sobic008G034300 Sobic001G205800--Sobic006G245500 Sobic001G205800--Sobic010G221800 Sobic010G164400 Sobic010G164400 Sobic001G205800--Sobic010G164400 Sobic001G205800--Sobic003G128700 Sobic001G205800--Sobic003G386800 Sobic001G205800--Sobic003G300900 Sobic007G135201--Sobic003G426100 Sobic001G231600 Sobic001G231600 Sobic007G135201--Sobic001G231600 Sobic007G135201--Sobic007G066932 Sobic007G067600 Sobic007G067600 Sobic007G135201--Sobic007G067600 Sobic002G195400 Sobic002G195400 Sobic007G135201--Sobic002G195400 Sobic007G135201--Sobic007G067350 Sobic010G102300 Sobic010G102300 Sobic007G135201--Sobic010G102300 Sobic010G035700 Sobic010G035700 Sobic007G135201--Sobic010G035700 Sobic007G135201--Sobic006G084600
Octagon: transcription factors


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