Gene annotation
Transcriptome id Sobic.010G060300.1
Synonym Sb10g005220
Functional annotation leucoanthocyanidin dioxygenase, putative, expressed
UniProt C5Z5D9
Pfam PF03171 PF14226
Panther DB PTHR10209 PTHR10209:SF157
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT5G20550 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os06g08060.1 : leucoanthocyanidin dioxygenase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G169900 hydrolase, NUDIX family, domain containing protein, expressed -
2 Sobic.004G266400 monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
3 Sobic.005G082200 ACT domain containing protein, expressed K01653: E2.2.1.6S, ilvH, acetolactate synthase I/III small subunit
4 Sobic.001G032700 heat shock protein DnaJ, putative, expressed -
5 Sobic.001G073500 5-nucleotidase domain-containing protein, putative, expressed -
6 Sobic.001G168250 - -
7 Sobic.001G531500 peroxisomal biogenesis factor 11, putative, expressed -
8 Sobic.003G247500 expressed protein -
9 Sobic.001G305600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
10 Sobic.001G327800 uncharacterized mscS family protein, putative, expressed K16052: ynaI, MscS family membrane protein
11 Sobic.003G067100 aspartyl-tRNA synthetase, putative, expressed K01876: aspartyl-tRNA synthetase
12 Sobic.002G165140 - K18693: DPP1, DPPL, diacylglycerol diphosphate phosphatase / phosphatidate phosphatase
13 Sobic.003G160200 multidrug resistance-associated protein, putative, expressed K05665: ATP-binding cassette, subfamily C (CFTR/MRP), member 1
14 Sobic.002G311200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
15 Sobic.003G392900 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
16 Sobic.010G176200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.002G231200 Rf1, mitochondrial precursor, putative, expressed K17710: pentatricopeptide repeat domain-containing protein 1
18 Sobic.001G056601 - K01695: tryptophan synthase alpha chain
19 Sobic.001G454500 potyvirus VPg interacting protein, putative, expressed -
20 Sobic.003G396200 expressed protein K13146: integrator complex subunit 9


Gene co-expression network
sample Sobic010G060300 Sobic010G060300 Sobic002G169900 Sobic002G169900 Sobic010G060300--Sobic002G169900 Sobic004G266400 Sobic004G266400 Sobic010G060300--Sobic004G266400 Sobic005G082200 Sobic005G082200 Sobic010G060300--Sobic005G082200 Sobic001G032700 Sobic001G032700 Sobic010G060300--Sobic001G032700 Sobic001G073500 Sobic001G073500 Sobic010G060300--Sobic001G073500 Sobic001G168250 Sobic001G168250 Sobic010G060300--Sobic001G168250 Sobic001G531500 Sobic001G531500 Sobic010G060300--Sobic001G531500 Sobic003G247500 Sobic003G247500 Sobic010G060300--Sobic003G247500 Sobic001G305600 Sobic001G305600 Sobic010G060300--Sobic001G305600 Sobic001G248300 Sobic001G248300 Sobic002G169900--Sobic001G248300 Sobic010G138000 Sobic010G138000 Sobic002G169900--Sobic010G138000 Sobic007G193700 Sobic007G193700 Sobic002G169900--Sobic007G193700 Sobic010G175500 Sobic010G175500 Sobic002G169900--Sobic010G175500 Sobic001G327800 Sobic001G327800 Sobic002G169900--Sobic001G327800 Sobic007G116200 Sobic007G116200 Sobic002G169900--Sobic007G116200 Sobic006G055200 Sobic006G055200 Sobic002G169900--Sobic006G055200 Sobic010G175400 Sobic010G175400 Sobic002G169900--Sobic010G175400 Sobic009G211000 Sobic009G211000 Sobic002G169900--Sobic009G211000 Sobic006G043600 Sobic006G043600 Sobic004G266400--Sobic006G043600 Sobic006G204900 Sobic006G204900 Sobic004G266400--Sobic006G204900 Sobic002G159700 Sobic002G159700 Sobic004G266400--Sobic002G159700 Sobic001G016700 Sobic001G016700 Sobic004G266400--Sobic001G016700 Sobic010G224000 Sobic010G224000 Sobic004G266400--Sobic010G224000 Sobic003G322700 Sobic003G322700 Sobic004G266400--Sobic003G322700 Sobic001G462500 Sobic001G462500 Sobic004G266400--Sobic001G462500 Sobic001G121200 Sobic001G121200 Sobic004G266400--Sobic001G121200 Sobic001G207400 Sobic001G207400 Sobic004G266400--Sobic001G207400 Sobic008G051300 Sobic008G051300 Sobic005G082200--Sobic008G051300 Sobic005G082200--Sobic001G327800 Sobic004G359100 Sobic004G359100 Sobic005G082200--Sobic004G359100 Sobic002G343400 Sobic002G343400 Sobic005G082200--Sobic002G343400 Sobic003G067100 Sobic003G067100 Sobic005G082200--Sobic003G067100 Sobic002G424700 Sobic002G424700 Sobic005G082200--Sobic002G424700 Sobic005G072100 Sobic005G072100 Sobic005G082200--Sobic005G072100 Sobic004G054400 Sobic004G054400 Sobic005G082200--Sobic004G054400 Sobic002G293600 Sobic002G293600 Sobic005G082200--Sobic002G293600 Sobic001G032700--Sobic004G054400 Sobic001G512500 Sobic001G512500 Sobic001G032700--Sobic001G512500 Sobic001G032700--Sobic001G327800 Sobic005G014700 Sobic005G014700 Sobic001G032700--Sobic005G014700 Sobic004G163800 Sobic004G163800 Sobic001G032700--Sobic004G163800 Sobic003G343400 Sobic003G343400 Sobic001G032700--Sobic003G343400 Sobic001G309300 Sobic001G309300 Sobic001G032700--Sobic001G309300 Sobic001G308200 Sobic001G308200 Sobic001G032700--Sobic001G308200 Sobic002G231200 Sobic002G231200 Sobic001G032700--Sobic002G231200 Sobic007G201500 Sobic007G201500 Sobic001G073500--Sobic007G201500 Sobic009G011600 Sobic009G011600 Sobic001G073500--Sobic009G011600 Sobic003G434900 Sobic003G434900 Sobic001G073500--Sobic003G434900 Sobic005G149200 Sobic005G149200 Sobic001G073500--Sobic005G149200 Sobic006G080800 Sobic006G080800 Sobic001G073500--Sobic006G080800 Sobic006G205100 Sobic006G205100 Sobic001G073500--Sobic006G205100 Sobic006G087700 Sobic006G087700 Sobic001G073500--Sobic006G087700 Sobic001G375100 Sobic001G375100 Sobic001G073500--Sobic001G375100 Sobic010G205100 Sobic010G205100 Sobic001G073500--Sobic010G205100 Sobic003G160200 Sobic003G160200 Sobic001G168250--Sobic003G160200 Sobic008G130000 Sobic008G130000 Sobic001G168250--Sobic008G130000 Sobic002G193800 Sobic002G193800 Sobic001G168250--Sobic002G193800 Sobic004G274100 Sobic004G274100 Sobic001G168250--Sobic004G274100 Sobic010G176200 Sobic010G176200 Sobic001G168250--Sobic010G176200 Sobic009G113800 Sobic009G113800 Sobic001G168250--Sobic009G113800 Sobic001G168250--Sobic001G308200 Sobic009G237100 Sobic009G237100 Sobic001G168250--Sobic009G237100 Sobic007G123500 Sobic007G123500 Sobic001G168250--Sobic007G123500 Sobic002G118200 Sobic002G118200 Sobic001G531500--Sobic002G118200 Sobic006G064100 Sobic006G064100 Sobic001G531500--Sobic006G064100 Sobic002G403600 Sobic002G403600 Sobic001G531500--Sobic002G403600 Sobic001G073900 Sobic001G073900 Sobic001G531500--Sobic001G073900 Sobic001G531500--Sobic010G205100 Sobic009G123900 Sobic009G123900 Sobic001G531500--Sobic009G123900 Sobic005G001700 Sobic005G001700 Sobic001G531500--Sobic005G001700 Sobic008G001900 Sobic008G001900 Sobic001G531500--Sobic008G001900 Sobic003G332700 Sobic003G332700 Sobic001G531500--Sobic003G332700 Sobic001G194200 Sobic001G194200 Sobic003G247500--Sobic001G194200 Sobic008G001200 Sobic008G001200 Sobic003G247500--Sobic008G001200 Sobic003G247500--Sobic001G375100 Sobic010G010700 Sobic010G010700 Sobic003G247500--Sobic010G010700 Sobic003G247500--Sobic006G055200 Sobic001G454500 Sobic001G454500 Sobic003G247500--Sobic001G454500 Sobic010G123600 Sobic010G123600 Sobic003G247500--Sobic010G123600 Sobic002G325300 Sobic002G325300 Sobic003G247500--Sobic002G325300 Sobic005G001000 Sobic005G001000 Sobic003G247500--Sobic005G001000 Sobic004G347800 Sobic004G347800 Sobic001G305600--Sobic004G347800 Sobic005G045000 Sobic005G045000 Sobic001G305600--Sobic005G045000 Sobic001G305600--Sobic006G064100 Sobic002G273300 Sobic002G273300 Sobic001G305600--Sobic002G273300 Sobic001G484400 Sobic001G484400 Sobic001G305600--Sobic001G484400 Sobic008G168300 Sobic008G168300 Sobic001G305600--Sobic008G168300 Sobic001G305600--Sobic001G531500 Sobic003G418100 Sobic003G418100 Sobic001G305600--Sobic003G418100 Sobic001G305600--Sobic010G176200
Octagon: transcription factors


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