Gene annotation
Transcriptome id Sobic.010G131300.1,Sobic.010G131300.5,Sobic.010G131300.4,Sobic.010G131300.3,Sobic.010G131300.2
Synonym Sb10g012120
Functional annotation ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed
UniProt A0A1W0VSU4 , A0A1W0VSU9 , A0A1W0VSS8 , A0A194YIV8 , A0A194YIW2
Pfam PF00651 PF13857 PF00651
Panther DB PTHR24413 PTHR24413:SF107
NCBI CDD KOG0511; Ankyrin repeat protein
KEGG Orthology K10520; ABTB1, ankyrin repeat and BTB/POZ domain-containing protein 1
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G04740 : ankyrin repeat family protein
RAP-DB (Rice) LOC_Os06g21330.1 : ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed
MaizeGDB (Corn) Zm00025a042794
Brachypodium KQK18477 , KQK18476
Barley HORVU7Hr1G045980.3 , HORVU7Hr1G045980.2 , HORVU7Hr1G045980.1 , HORVU7Hr1G045980.5 , HORVU7Hr1G045980.4
Wheat TraesCS7D02G226000 , TraesCS7D02G226000 , TraesCS7B02G191100 , TraesCS7B02G191100 , TraesCS7A02G224500 , TraesCS7A02G224500 , TraesCS7A02G224500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G173400 Regulator of chromosome condensation domain containing protein, expressed -
2 Sobic.003G133700 transporter, major facilitator family, putative, expressed K08193: MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other
3 Sobic.001G093500 expressed protein -
4 Sobic.004G074000 lycopene beta cyclase, chloroplast precursor, putative, expressed K06443: lcyB, crtL1, lycopene beta-cyclase
5 Sobic.001G524900 ribosomal protein L5, putative, expressed K02931: RP-L5, MRPL5, large subunit ribosomal protein L5
6 Sobic.004G107500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@potassium channel KAT1, putative, expressed -
7 Sobic.002G391000 - -
8 Sobic.001G491900 expressed protein -
9 Sobic.007G111500 expressed protein -
10 Sobic.002G370700 expressed protein -
11 Sobic.004G343733 - -
12 Sobic.004G007200 - -
13 Sobic.002G036300 expressed protein -
14 Sobic.009G047033 - -
15 Sobic.006G162200 NDH-M H PLASTOQUINONE DEHY, putative, expressed -
16 Sobic.003G294700 - -
17 Sobic.005G201100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@kinesin motor domain containing protein, putative, expressed K10406: kinesin family member C2/C3
18 Sobic.001G184300 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
19 Sobic.004G177500 expressed protein -
20 Sobic.001G453150 - -


Gene co-expression network
sample Sobic010G131300 Sobic010G131300 Sobic001G173400 Sobic001G173400 Sobic010G131300--Sobic001G173400 Sobic003G133700 Sobic003G133700 Sobic010G131300--Sobic003G133700 Sobic001G093500 Sobic001G093500 Sobic010G131300--Sobic001G093500 Sobic004G074000 Sobic004G074000 Sobic010G131300--Sobic004G074000 Sobic001G524900 Sobic001G524900 Sobic010G131300--Sobic001G524900 Sobic004G107500 Sobic004G107500 Sobic010G131300--Sobic004G107500 Sobic002G391000 Sobic002G391000 Sobic010G131300--Sobic002G391000 Sobic001G491900 Sobic001G491900 Sobic010G131300--Sobic001G491900 Sobic007G111500 Sobic007G111500 Sobic010G131300--Sobic007G111500 Sobic001G173400--Sobic003G133700 Sobic004G177500 Sobic004G177500 Sobic001G173400--Sobic004G177500 Sobic008G177900 Sobic008G177900 Sobic001G173400--Sobic008G177900 Sobic002G334900 Sobic002G334900 Sobic001G173400--Sobic002G334900 Sobic006G074500 Sobic006G074500 Sobic001G173400--Sobic006G074500 Sobic001G173400--Sobic010G131300 Sobic002G104500 Sobic002G104500 Sobic001G173400--Sobic002G104500 Sobic001G173400--Sobic001G524900 Sobic003G094500 Sobic003G094500 Sobic001G173400--Sobic003G094500 Sobic003G050800 Sobic003G050800 Sobic003G133700--Sobic003G050800 Sobic003G133700--Sobic006G074500 Sobic006G101600 Sobic006G101600 Sobic003G133700--Sobic006G101600 Sobic004G224000 Sobic004G224000 Sobic003G133700--Sobic004G224000 Sobic002G430100 Sobic002G430100 Sobic003G133700--Sobic002G430100 Sobic010G249600 Sobic010G249600 Sobic003G133700--Sobic010G249600 Sobic007G077466 Sobic007G077466 Sobic003G133700--Sobic007G077466 Sobic001G184300 Sobic001G184300 Sobic003G133700--Sobic001G184300 Sobic009G213900 Sobic009G213900 Sobic003G133700--Sobic009G213900 Sobic006G162200 Sobic006G162200 Sobic001G093500--Sobic006G162200 Sobic005G165500 Sobic005G165500 Sobic001G093500--Sobic005G165500 Sobic005G039600 Sobic005G039600 Sobic001G093500--Sobic005G039600 Sobic008G065000 Sobic008G065000 Sobic001G093500--Sobic008G065000 Sobic001G536901 Sobic001G536901 Sobic001G093500--Sobic001G536901 Sobic006G272900 Sobic006G272900 Sobic001G093500--Sobic006G272900 Sobic007G034300 Sobic007G034300 Sobic001G093500--Sobic007G034300 Sobic004G305800 Sobic004G305800 Sobic001G093500--Sobic004G305800 Sobic010G201700 Sobic010G201700 Sobic001G093500--Sobic010G201700 Sobic009G140600 Sobic009G140600 Sobic004G074000--Sobic009G140600 Sobic003G359100 Sobic003G359100 Sobic004G074000--Sobic003G359100 Sobic008G134800 Sobic008G134800 Sobic004G074000--Sobic008G134800 Sobic010G160700 Sobic010G160700 Sobic004G074000--Sobic010G160700 Sobic008G102000 Sobic008G102000 Sobic004G074000--Sobic008G102000 Sobic009G143100 Sobic009G143100 Sobic004G074000--Sobic009G143100 Sobic005G194100 Sobic005G194100 Sobic004G074000--Sobic005G194100 Sobic007G223500 Sobic007G223500 Sobic004G074000--Sobic007G223500 Sobic007G207800 Sobic007G207800 Sobic004G074000--Sobic007G207800 Sobic008G119100 Sobic008G119100 Sobic001G524900--Sobic008G119100 Sobic002G076450 Sobic002G076450 Sobic001G524900--Sobic002G076450 Sobic010G051900 Sobic010G051900 Sobic001G524900--Sobic010G051900 Sobic002G227100 Sobic002G227100 Sobic001G524900--Sobic002G227100 Sobic007G174200 Sobic007G174200 Sobic001G524900--Sobic007G174200 Sobic001G367900 Sobic001G367900 Sobic001G524900--Sobic001G367900 Sobic010G242000 Sobic010G242000 Sobic001G524900--Sobic010G242000 Sobic009G047033 Sobic009G047033 Sobic001G524900--Sobic009G047033 Sobic006G152801 Sobic006G152801 Sobic001G524900--Sobic006G152801 Sobic004G107500--Sobic001G184300 Sobic006G128500 Sobic006G128500 Sobic004G107500--Sobic006G128500 Sobic010G019200 Sobic010G019200 Sobic004G107500--Sobic010G019200 Sobic004G227600 Sobic004G227600 Sobic004G107500--Sobic004G227600 Sobic006G177400 Sobic006G177400 Sobic004G107500--Sobic006G177400 Sobic003G016700 Sobic003G016700 Sobic004G107500--Sobic003G016700 Sobic005G057700 Sobic005G057700 Sobic004G107500--Sobic005G057700 Sobic004G107500--Sobic006G074500 Sobic004G107500--Sobic003G133700 Sobic006G125301 Sobic006G125301 Sobic002G391000--Sobic006G125301 Sobic001G055300 Sobic001G055300 Sobic002G391000--Sobic001G055300 Sobic005G226700 Sobic005G226700 Sobic002G391000--Sobic005G226700 Sobic003G217566 Sobic003G217566 Sobic002G391000--Sobic003G217566 Sobic001G177700 Sobic001G177700 Sobic002G391000--Sobic001G177700 Sobic001G044200 Sobic001G044200 Sobic002G391000--Sobic001G044200 Sobic006G107332 Sobic006G107332 Sobic002G391000--Sobic006G107332 Sobic002G088500 Sobic002G088500 Sobic002G391000--Sobic002G088500 Sobic007G129500 Sobic007G129500 Sobic002G391000--Sobic007G129500 Sobic004G295900 Sobic004G295900 Sobic001G491900--Sobic004G295900 Sobic006G088450 Sobic006G088450 Sobic001G491900--Sobic006G088450 Sobic001G491900--Sobic003G133700 Sobic001G033800 Sobic001G033800 Sobic001G491900--Sobic001G033800 Sobic008G016400 Sobic008G016400 Sobic001G491900--Sobic008G016400 Sobic006G165700 Sobic006G165700 Sobic001G491900--Sobic006G165700 Sobic004G273550 Sobic004G273550 Sobic001G491900--Sobic004G273550 Sobic002G259900 Sobic002G259900 Sobic001G491900--Sobic002G259900 Sobic002G288500 Sobic002G288500 Sobic001G491900--Sobic002G288500 Sobic007G111500--Sobic002G430100 Sobic002G036300 Sobic002G036300 Sobic007G111500--Sobic002G036300 Sobic003G347520 Sobic003G347520 Sobic007G111500--Sobic003G347520 Sobic003G365200 Sobic003G365200 Sobic007G111500--Sobic003G365200 Sobic007G111500--Sobic006G074500 Sobic006G109000 Sobic006G109000 Sobic007G111500--Sobic006G109000 Sobic007G111500--Sobic006G101600 Sobic007G111500--Sobic003G050800 Sobic001G460900 Sobic001G460900 Sobic007G111500--Sobic001G460900
Octagon: transcription factors


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