Gene annotation
Transcriptome id Sobic.010G231800.1
Synonym
Functional annotation ribosomal protein, putative, expressed
UniProt A0A194YL20
Pfam PF00411
Panther DB PTHR11759 PTHR11759:SF12
NCBI CDD KOG0407; 40S ribosomal protein S14
KEGG Orthology -
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT3G52580 : Ribosomal protein S11 family protein
RAP-DB (Rice) LOC_Os02g06700.1 : ribosomal protein, putative, expressed
MaizeGDB (Corn) Zm00025a041877 , Zm00025a041876 , Zm00025a041875 , Zm00025a051381 , Zm00025a018134
Brachypodium KQJ93475 , KQK17170
Barley -
Wheat TraesCS7B02G355300 , TraesCS6A02G137300 , TraesCS6B02G165600 , TraesCS6D02G126300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G200800 phosphoribulokinase/Uridine kinase family protein, expressed K00855: PRK, phosphoribulokinase
2 Sobic.006G069300 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
3 Sobic.001G338500 ACT domain containing protein, expressed -
4 Sobic.001G361700 expressed protein -
5 Sobic.003G131000 expressed protein -
6 Sobic.007G171600 Ser/Thr protein phosphatase family protein, putative, expressed K01517: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase
7 Sobic.002G098800 peroxiredoxin, putative, expressed -
8 Sobic.010G094301 - -
9 Sobic.002G394100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.001G313900 rhoGAP domain containing protein, expressed -
11 Sobic.003G199800 expressed protein -
12 Sobic.010G109500 expressed protein -
13 Sobic.005G123200 cbbY, putative, expressed -
14 Sobic.010G276400 "Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@"Phytoene synthase, chloroplast precursor (Zm)"(PubMedID : 27208977)@carotenoid biosynthesi(PubMedID : 18162592)@phytoene synthase, chloroplast precursor, putative, expressed K02291: 15-cis-phytoene synthase
15 Sobic.003G057900 ribosomal protein L5, putative, expressed -
16 Sobic.009G132900 PPDK(PubMedID : 19549309)@pyruvate orthophosphate dikinase(PubMedID : 26465154)@pyruvate orthophosphate dikinase(PubMedID : 26465154)@phyruvate phosphate dikinase(PubMedID : 26904072)@-(PubMedID : 26976818)@pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed K01006: pyruvate, orthophosphate dikinase
17 Sobic.004G026300 heat shock protein 18.2(PubMedID : 26465154)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
18 Sobic.002G000500 isoflavone reductase, putative, expressed -
19 Sobic.006G134400 protein FAM133, putative, expressed -
20 Sobic.008G021300 Unnamed(PubMedID : 24676859)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FHA domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G231800 Sobic010G231800 Sobic006G200800 Sobic006G200800 Sobic010G231800--Sobic006G200800 Sobic006G069300 Sobic006G069300 Sobic010G231800--Sobic006G069300 Sobic001G338500 Sobic001G338500 Sobic010G231800--Sobic001G338500 Sobic001G361700 Sobic001G361700 Sobic010G231800--Sobic001G361700 Sobic003G131000 Sobic003G131000 Sobic010G231800--Sobic003G131000 Sobic007G171600 Sobic007G171600 Sobic010G231800--Sobic007G171600 Sobic002G098800 Sobic002G098800 Sobic010G231800--Sobic002G098800 Sobic010G094301 Sobic010G094301 Sobic010G231800--Sobic010G094301 Sobic002G394100 Sobic002G394100 Sobic010G231800--Sobic002G394100 Sobic008G019100 Sobic008G019100 Sobic006G200800--Sobic008G019100 Sobic008G021300 Sobic008G021300 Sobic006G200800--Sobic008G021300 Sobic006G054300 Sobic006G054300 Sobic006G200800--Sobic006G054300 Sobic001G192100 Sobic001G192100 Sobic006G200800--Sobic001G192100 Sobic004G274100 Sobic004G274100 Sobic006G200800--Sobic004G274100 Sobic001G010100 Sobic001G010100 Sobic006G200800--Sobic001G010100 Sobic004G343900 Sobic004G343900 Sobic006G200800--Sobic004G343900 Sobic003G132100 Sobic003G132100 Sobic006G200800--Sobic003G132100 Sobic001G527000 Sobic001G527000 Sobic006G200800--Sobic001G527000 Sobic003G431900 Sobic003G431900 Sobic006G069300--Sobic003G431900 Sobic008G053200 Sobic008G053200 Sobic006G069300--Sobic008G053200 Sobic008G104601 Sobic008G104601 Sobic006G069300--Sobic008G104601 Sobic004G305800 Sobic004G305800 Sobic006G069300--Sobic004G305800 Sobic003G199800 Sobic003G199800 Sobic006G069300--Sobic003G199800 Sobic003G256700 Sobic003G256700 Sobic006G069300--Sobic003G256700 Sobic004G035601 Sobic004G035601 Sobic006G069300--Sobic004G035601 Sobic001G520800 Sobic001G520800 Sobic006G069300--Sobic001G520800 Sobic009G104800 Sobic009G104800 Sobic006G069300--Sobic009G104800 Sobic010G276400 Sobic010G276400 Sobic001G338500--Sobic010G276400 Sobic001G338500--Sobic003G199800 Sobic010G109500 Sobic010G109500 Sobic001G338500--Sobic010G109500 Sobic004G026700 Sobic004G026700 Sobic001G338500--Sobic004G026700 Sobic002G000500 Sobic002G000500 Sobic001G338500--Sobic002G000500 Sobic004G035500 Sobic004G035500 Sobic001G338500--Sobic004G035500 Sobic004G026300 Sobic004G026300 Sobic001G338500--Sobic004G026300 Sobic001G068400 Sobic001G068400 Sobic001G338500--Sobic001G068400 Sobic006G147300 Sobic006G147300 Sobic001G338500--Sobic006G147300 Sobic001G361700--Sobic004G026700 Sobic001G361700--Sobic002G000500 Sobic001G361700--Sobic001G068400 Sobic010G183032 Sobic010G183032 Sobic001G361700--Sobic010G183032 Sobic002G040100 Sobic002G040100 Sobic001G361700--Sobic002G040100 Sobic010G108401 Sobic010G108401 Sobic001G361700--Sobic010G108401 Sobic010G183100 Sobic010G183100 Sobic001G361700--Sobic010G183100 Sobic006G011100 Sobic006G011100 Sobic001G361700--Sobic006G011100 Sobic010G038500 Sobic010G038500 Sobic001G361700--Sobic010G038500 Sobic003G131000--Sobic004G026300 Sobic001G198800 Sobic001G198800 Sobic003G131000--Sobic001G198800 Sobic003G131000--Sobic010G276400 Sobic003G131000--Sobic010G038500 Sobic003G131000--Sobic002G040100 Sobic003G131000--Sobic010G109500 Sobic003G057900 Sobic003G057900 Sobic003G131000--Sobic003G057900 Sobic003G131000--Sobic003G199800 Sobic003G131000--Sobic001G068400 Sobic007G171600--Sobic002G000500 Sobic003G069100 Sobic003G069100 Sobic007G171600--Sobic003G069100 Sobic007G171600--Sobic010G109500 Sobic007G171600--Sobic010G276400 Sobic007G171600--Sobic003G199800 Sobic004G023200 Sobic004G023200 Sobic007G171600--Sobic004G023200 Sobic007G171600--Sobic002G040100 Sobic001G338700 Sobic001G338700 Sobic007G171600--Sobic001G338700 Sobic006G234100 Sobic006G234100 Sobic007G171600--Sobic006G234100 Sobic001G069000 Sobic001G069000 Sobic002G098800--Sobic001G069000 Sobic004G308700 Sobic004G308700 Sobic002G098800--Sobic004G308700 Sobic002G098800--Sobic008G021300 Sobic004G272100 Sobic004G272100 Sobic002G098800--Sobic004G272100 Sobic008G066100 Sobic008G066100 Sobic002G098800--Sobic008G066100 Sobic002G098800--Sobic004G035500 Sobic010G201700 Sobic010G201700 Sobic002G098800--Sobic010G201700 Sobic003G303700 Sobic003G303700 Sobic002G098800--Sobic003G303700 Sobic002G098800--Sobic004G274100 Sobic010G094301--Sobic003G057900 Sobic001G353800 Sobic001G353800 Sobic010G094301--Sobic001G353800 Sobic010G094301--Sobic001G192100 Sobic009G132900 Sobic009G132900 Sobic010G094301--Sobic009G132900 Sobic010G094301--Sobic006G234100 Sobic010G094301--Sobic010G109500 Sobic002G339200 Sobic002G339200 Sobic010G094301--Sobic002G339200 Sobic001G448400 Sobic001G448400 Sobic010G094301--Sobic001G448400 Sobic006G264201 Sobic006G264201 Sobic010G094301--Sobic006G264201 Sobic002G394100--Sobic009G132900 Sobic002G394100--Sobic010G109500 Sobic002G394100--Sobic001G448400 Sobic002G394100--Sobic002G339200 Sobic002G394100--Sobic006G011100 Sobic002G394100--Sobic002G000500 Sobic002G394100--Sobic006G234100 Sobic007G029300 Sobic007G029300 Sobic002G394100--Sobic007G029300 Sobic010G241000 Sobic010G241000 Sobic002G394100--Sobic010G241000
Octagon: transcription factors


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