Gene annotation
Transcriptome id Sobic.001G049300.2,Sobic.001G049300.1
Synonym Sb01g004520
Functional annotation phosphatase, putative, expressed
UniProt A0A1B6QHC9 , A0A1B6QHD0
Pfam PF01569
Panther DB PTHR14969 PTHR14969:SF3
NCBI CDD KOG2822; Sphingoid base-phosphate phosphatase
KEGG Orthology K04716; sphingosine-1-phosphate phosphatase 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G58490 : Phosphatidic acid phosphatase (PAP2) family protein
RAP-DB (Rice) LOC_Os03g59070.1 : phosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a016527 , Zm00025a008636
Brachypodium KQK12604
Barley HORVU1Hr1G018080.7 , HORVU1Hr1G018080.31 , HORVU5Hr1G109420.11 , HORVU5Hr1G109420.10 , HORVU5Hr1G109420.13 , HORVU5Hr1G109420.12 , HORVU5Hr1G109420.14 , HORVU5Hr1G109420.9 , HORVU5Hr1G109420.8 , HORVU5Hr1G109420.5 , HORVU5Hr1G109420.4 , HORVU5Hr1G109420.7 , HORVU5Hr1G109420.6 , HORVU5Hr1G109420.3 , HORVU5Hr1G109420.2
Wheat TraesCS5D02G465500 , TraesCS5A02G455100 , TraesCS5B02G463900
Populus -


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cDNA sequences
Sobic.001G049300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G056600 expressed protein -
2 Sobic.007G200500 "Candidate orthologue to the wheat Pm40 gene, 5 Calcium-transporting ATPase plasma membrane-type"(PubMedID : 27755575)@"Ca ATPase, IIB type"(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
3 Sobic.004G261600 expressed protein -
4 Sobic.003G126300 OsRhmbd2 - Putative Rhomboid homologue, expressed -
5 Sobic.004G228800 LMBR1 integral membrane protein, putative, expressed -
6 Sobic.003G427600 villin protein, putative, expressed -
7 Sobic.001G251200 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
8 Sobic.006G115300 amino acid transporter, putative, expressed -
9 Sobic.003G209200 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
10 Sobic.003G036500 fruit protein PKIWI502, putative, expressed -
11 Sobic.002G156000 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed K14724: SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8
12 Sobic.006G217300 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12448: UXE, UDP-arabinose 4-epimerase
13 Sobic.010G232600 solute carrier family 35 member F5, putative, expressed K15289: solute carrier family 35, member F5
14 Sobic.003G302900 transcriptional regulator family protein, putative, expressed -
15 Sobic.005G209500 expressed protein -
16 Sobic.004G004200 expressed protein -
17 Sobic.003G036800 WD domain, G-beta repeat domain containing protein, expressed K10260: FBXW7, F-box and WD-40 domain protein 7
18 Sobic.001G474700 expressed protein -
19 Sobic.004G351100 signal peptide peptidase-like 2B, putative, expressed K09597: signal peptide peptidase-like 2B
20 Sobic.009G122325 - -


Gene co-expression network
sample Sobic001G049300 Sobic001G049300 Sobic007G056600 Sobic007G056600 Sobic001G049300--Sobic007G056600 Sobic007G200500 Sobic007G200500 Sobic001G049300--Sobic007G200500 Sobic004G261600 Sobic004G261600 Sobic001G049300--Sobic004G261600 Sobic003G126300 Sobic003G126300 Sobic001G049300--Sobic003G126300 Sobic004G228800 Sobic004G228800 Sobic001G049300--Sobic004G228800 Sobic003G427600 Sobic003G427600 Sobic001G049300--Sobic003G427600 Sobic001G251200 Sobic001G251200 Sobic001G049300--Sobic001G251200 Sobic006G115300 Sobic006G115300 Sobic001G049300--Sobic006G115300 Sobic003G209200 Sobic003G209200 Sobic001G049300--Sobic003G209200 Sobic007G056600--Sobic004G261600 Sobic007G056600--Sobic004G228800 Sobic007G203300 Sobic007G203300 Sobic007G056600--Sobic007G203300 Sobic010G232600 Sobic010G232600 Sobic007G056600--Sobic010G232600 Sobic006G077300 Sobic006G077300 Sobic007G056600--Sobic006G077300 Sobic004G124500 Sobic004G124500 Sobic007G056600--Sobic004G124500 Sobic007G056600--Sobic003G126300 Sobic003G119700 Sobic003G119700 Sobic007G056600--Sobic003G119700 Sobic007G056600--Sobic001G251200 Sobic002G156000 Sobic002G156000 Sobic007G200500--Sobic002G156000 Sobic007G200500--Sobic004G261600 Sobic004G004200 Sobic004G004200 Sobic007G200500--Sobic004G004200 Sobic007G200500--Sobic003G427600 Sobic001G281100 Sobic001G281100 Sobic007G200500--Sobic001G281100 Sobic007G200500--Sobic004G228800 Sobic001G065000 Sobic001G065000 Sobic007G200500--Sobic001G065000 Sobic007G200500--Sobic003G126300 Sobic004G242500 Sobic004G242500 Sobic007G200500--Sobic004G242500 Sobic004G261600--Sobic004G228800 Sobic006G126100 Sobic006G126100 Sobic004G261600--Sobic006G126100 Sobic004G261600--Sobic003G209200 Sobic003G104000 Sobic003G104000 Sobic004G261600--Sobic003G104000 Sobic007G005500 Sobic007G005500 Sobic004G261600--Sobic007G005500 Sobic004G261600--Sobic001G251200 Sobic001G415300 Sobic001G415300 Sobic004G261600--Sobic001G415300 Sobic004G004300 Sobic004G004300 Sobic004G261600--Sobic004G004300 Sobic008G099800 Sobic008G099800 Sobic004G261600--Sobic008G099800 Sobic003G126300--Sobic004G228800 Sobic009G079300 Sobic009G079300 Sobic003G126300--Sobic009G079300 Sobic003G126300--Sobic004G004200 Sobic008G110600 Sobic008G110600 Sobic003G126300--Sobic008G110600 Sobic003G126300--Sobic004G261600 Sobic006G034000 Sobic006G034000 Sobic003G126300--Sobic006G034000 Sobic003G272400 Sobic003G272400 Sobic003G126300--Sobic003G272400 Sobic003G126300--Sobic007G056600 Sobic006G033200 Sobic006G033200 Sobic003G126300--Sobic006G033200 Sobic004G228800--Sobic004G261600 Sobic010G261600 Sobic010G261600 Sobic004G228800--Sobic010G261600 Sobic004G323700 Sobic004G323700 Sobic004G228800--Sobic004G323700 Sobic010G278200 Sobic010G278200 Sobic004G228800--Sobic010G278200 Sobic004G236200 Sobic004G236200 Sobic004G228800--Sobic004G236200 Sobic006G131000 Sobic006G131000 Sobic004G228800--Sobic006G131000 Sobic005G177700 Sobic005G177700 Sobic004G228800--Sobic005G177700 Sobic004G228800--Sobic007G056600 Sobic004G228800--Sobic003G126300 Sobic009G229600 Sobic009G229600 Sobic003G427600--Sobic009G229600 Sobic003G427600--Sobic006G131000 Sobic003G270600 Sobic003G270600 Sobic003G427600--Sobic003G270600 Sobic003G427600--Sobic004G236200 Sobic001G369000 Sobic001G369000 Sobic003G427600--Sobic001G369000 Sobic003G427600--Sobic001G281100 Sobic003G427600--Sobic006G077300 Sobic004G344901 Sobic004G344901 Sobic003G427600--Sobic004G344901 Sobic009G049400 Sobic009G049400 Sobic003G427600--Sobic009G049400 Sobic003G362600 Sobic003G362600 Sobic001G251200--Sobic003G362600 Sobic001G128300 Sobic001G128300 Sobic001G251200--Sobic001G128300 Sobic009G165700 Sobic009G165700 Sobic001G251200--Sobic009G165700 Sobic001G251200--Sobic004G004300 Sobic001G251200--Sobic004G261600 Sobic001G451400 Sobic001G451400 Sobic001G251200--Sobic001G451400 Sobic001G043100 Sobic001G043100 Sobic001G251200--Sobic001G043100 Sobic001G251200--Sobic006G131000 Sobic001G251200--Sobic001G281100 Sobic009G118600 Sobic009G118600 Sobic006G115300--Sobic009G118600 Sobic007G131700 Sobic007G131700 Sobic006G115300--Sobic007G131700 Sobic003G252400 Sobic003G252400 Sobic006G115300--Sobic003G252400 Sobic001G235500 Sobic001G235500 Sobic006G115300--Sobic001G235500 Sobic003G252300 Sobic003G252300 Sobic006G115300--Sobic003G252300 Sobic004G236550 Sobic004G236550 Sobic006G115300--Sobic004G236550 Sobic006G115300--Sobic003G272400 Sobic001G521500 Sobic001G521500 Sobic006G115300--Sobic001G521500 Sobic006G115300--Sobic003G126300 Sobic003G209200--Sobic007G005500 Sobic006G260500 Sobic006G260500 Sobic003G209200--Sobic006G260500 Sobic003G209200--Sobic006G077300 Sobic006G021700 Sobic006G021700 Sobic003G209200--Sobic006G021700 Sobic005G062200 Sobic005G062200 Sobic003G209200--Sobic005G062200 Sobic004G241900 Sobic004G241900 Sobic003G209200--Sobic004G241900 Sobic003G209200--Sobic004G261600 Sobic005G110499 Sobic005G110499 Sobic003G209200--Sobic005G110499 Sobic009G077600 Sobic009G077600 Sobic003G209200--Sobic009G077600
Octagon: transcription factors


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