Gene annotation
Transcriptome id Sobic.007G200500.1
Synonym Sb07g026810, ACA9, ATACA9
Functional annotation "Candidate orthologue to the wheat Pm40 gene, 5 Calcium-transporting ATPase plasma membrane-type" (PubMedID : 27755575)
"Ca ATPase, IIB type" (PubMedID : 22196357)
calcium-transporting ATPase, plasma membrane-type, putative, expressed
UniProt C5YI87
Pfam PF00690 PF12515 PF00702 PF00122 PF00689
Panther DB PTHR24093 PTHR24093:SF359
NCBI CDD -
KEGG Orthology K01537; P-type Ca2+ transporter type 2C
Gene Ontology GO:0005516; calmodulin binding GO:0000166nucleotide binding


Orthologs (automatic annotation)
TAIR AT5G57110 : autoinhibited Ca2+ -ATPase, isoform 8
RAP-DB (Rice) LOC_Os04g51610.1 : calcium-transporting ATPase, plasma membrane-type, putative, expressed
MaizeGDB (Corn) Zm00025a004914 , Zm00025a047514 , Zm00025a047511 , Zm00025a005185 , Zm00025a019151
Brachypodium KQJ98964 , KQJ99033
Barley HORVU7Hr1G052560.5 , HORVU7Hr1G052560.4 , HORVU7Hr1G052560.7 , HORVU7Hr1G052560.6 , HORVU7Hr1G052560.1 , HORVU7Hr1G052560.3 , HORVU7Hr1G052560.2 , HORVU5Hr1G075050.1 , HORVU5Hr1G075050.2 , HORVU5Hr1G075050.3 , HORVU5Hr1G075050.4 , HORVU5Hr1G075050.5 , HORVU5Hr1G075050.6 , HORVU5Hr1G075050.7 , HORVU5Hr1G075050.9 , HORVU5Hr1G075050.28 , HORVU5Hr1G075050.18 , HORVU5Hr1G075050.19 , HORVU5Hr1G075050.12 , HORVU5Hr1G075050.13 , HORVU5Hr1G075050.10 , HORVU5Hr1G075050.11 , HORVU5Hr1G075050.17 , HORVU5Hr1G075050.20 , HORVU5Hr1G075050.27 , HORVU5Hr1G075050.26 , HORVU5Hr1G075050.29 , HORVU5Hr1G075050.23 , HORVU5Hr1G075050.22 , HORVU5Hr1G075050.21 , HORVU5Hr1G075050.25 , HORVU5Hr1G075050.24 , HORVU5Hr1G075050.16 , HORVU5Hr1G075050.14 , HORVU5Hr1G075050.15 , HORVU5Hr1G075050.30 , HORVU5Hr1G075050.34 , HORVU5Hr1G075050.35
Wheat TraesCS7D02G252900 , TraesCS7D02G252900 , TraesCS7D02G252900 , TraesCS7D02G252900 , TraesCS7D02G252900 , TraesCS7D02G252900 , TraesCS7D02G252900 , TraesCS7A02G254400 , TraesCS7A02G254400 , TraesCS7A02G254400 , TraesCS7A02G254400 , TraesCS7A02G254400 , TraesCS7A02G254400 , TraesCS7A02G254400 , TraesCS7B02G150600 , TraesCS7B02G150600 , TraesCS7B02G150600 , TraesCS7B02G150600 , TraesCS7B02G150600 , TraesCS7B02G150600 , TraesCS7B02G150600 , TraesCS7B02G150600
Populus PNT21977 , PNT21976


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G156000 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed K14724: SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8
2 Sobic.004G261600 expressed protein -
3 Sobic.004G004200 expressed protein -
4 Sobic.003G427600 villin protein, putative, expressed -
5 Sobic.001G281100 START domain containing protein, expressed -
6 Sobic.004G228800 LMBR1 integral membrane protein, putative, expressed -
7 Sobic.001G065000 expressed protein -
8 Sobic.003G126300 OsRhmbd2 - Putative Rhomboid homologue, expressed -
9 Sobic.004G242500 glycosyl hydrolase family 47 domain contain protein, expressed K10084: ER degradation enhancer, mannosidase alpha-like 1
10 Sobic.010G232600 solute carrier family 35 member F5, putative, expressed K15289: solute carrier family 35, member F5
11 Sobic.007G056600 expressed protein -
12 Sobic.004G236200 SEC6, putative, expressed K06110: EXOC3, exocyst complex component 3
13 Sobic.001G224600 peroxisome assembly protein 12, putative, expressed K13345: PEX12, peroxin-12
14 Sobic.006G077300 expressed protein K17637: EXOC2, exocyst complex component 2
15 Sobic.004G178200 ligatin, putative, expressed K15027: translation initiation factor 2D
16 Sobic.006G082400 expressed protein -
17 Sobic.004G091100 nuclear protein ZAP-related, putative, expressed K17602: YLP motif-containing protein 1
18 Sobic.001G347500 expressed protein -
19 Sobic.005G177700 transmembrane protein 49, putative, expressed -
20 Sobic.001G251200 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase


Gene co-expression network
sample Sobic007G200500 Sobic007G200500 Sobic002G156000 Sobic002G156000 Sobic007G200500--Sobic002G156000 Sobic004G261600 Sobic004G261600 Sobic007G200500--Sobic004G261600 Sobic004G004200 Sobic004G004200 Sobic007G200500--Sobic004G004200 Sobic003G427600 Sobic003G427600 Sobic007G200500--Sobic003G427600 Sobic001G281100 Sobic001G281100 Sobic007G200500--Sobic001G281100 Sobic004G228800 Sobic004G228800 Sobic007G200500--Sobic004G228800 Sobic001G065000 Sobic001G065000 Sobic007G200500--Sobic001G065000 Sobic003G126300 Sobic003G126300 Sobic007G200500--Sobic003G126300 Sobic004G242500 Sobic004G242500 Sobic007G200500--Sobic004G242500 Sobic001G413900 Sobic001G413900 Sobic002G156000--Sobic001G413900 Sobic010G072800 Sobic010G072800 Sobic002G156000--Sobic010G072800 Sobic004G209800 Sobic004G209800 Sobic002G156000--Sobic004G209800 Sobic002G156000--Sobic004G004200 Sobic002G156000--Sobic004G261600 Sobic004G236200 Sobic004G236200 Sobic002G156000--Sobic004G236200 Sobic004G016000 Sobic004G016000 Sobic002G156000--Sobic004G016000 Sobic002G430000 Sobic002G430000 Sobic002G156000--Sobic002G430000 Sobic002G156000--Sobic001G281100 Sobic004G261600--Sobic004G228800 Sobic006G126100 Sobic006G126100 Sobic004G261600--Sobic006G126100 Sobic003G209200 Sobic003G209200 Sobic004G261600--Sobic003G209200 Sobic003G104000 Sobic003G104000 Sobic004G261600--Sobic003G104000 Sobic007G005500 Sobic007G005500 Sobic004G261600--Sobic007G005500 Sobic001G251200 Sobic001G251200 Sobic004G261600--Sobic001G251200 Sobic001G415300 Sobic001G415300 Sobic004G261600--Sobic001G415300 Sobic004G004300 Sobic004G004300 Sobic004G261600--Sobic004G004300 Sobic008G099800 Sobic008G099800 Sobic004G261600--Sobic008G099800 Sobic004G004200--Sobic004G004300 Sobic004G004200--Sobic001G281100 Sobic004G004200--Sobic002G430000 Sobic004G269200 Sobic004G269200 Sobic004G004200--Sobic004G269200 Sobic001G101100 Sobic001G101100 Sobic004G004200--Sobic001G101100 Sobic004G004200--Sobic001G251200 Sobic004G004200--Sobic004G261600 Sobic002G270500 Sobic002G270500 Sobic004G004200--Sobic002G270500 Sobic004G004200--Sobic003G126300 Sobic009G229600 Sobic009G229600 Sobic003G427600--Sobic009G229600 Sobic006G131000 Sobic006G131000 Sobic003G427600--Sobic006G131000 Sobic003G270600 Sobic003G270600 Sobic003G427600--Sobic003G270600 Sobic003G427600--Sobic004G236200 Sobic001G369000 Sobic001G369000 Sobic003G427600--Sobic001G369000 Sobic003G427600--Sobic001G281100 Sobic006G077300 Sobic006G077300 Sobic003G427600--Sobic006G077300 Sobic004G344901 Sobic004G344901 Sobic003G427600--Sobic004G344901 Sobic009G049400 Sobic009G049400 Sobic003G427600--Sobic009G049400 Sobic001G534800 Sobic001G534800 Sobic001G281100--Sobic001G534800 Sobic001G281100--Sobic004G004300 Sobic001G281100--Sobic001G065000 Sobic005G026200 Sobic005G026200 Sobic001G281100--Sobic005G026200 Sobic001G281100--Sobic008G099800 Sobic003G229500 Sobic003G229500 Sobic001G281100--Sobic003G229500 Sobic006G012500 Sobic006G012500 Sobic001G281100--Sobic006G012500 Sobic004G072100 Sobic004G072100 Sobic001G281100--Sobic004G072100 Sobic010G275500 Sobic010G275500 Sobic001G281100--Sobic010G275500 Sobic004G228800--Sobic004G261600 Sobic010G261600 Sobic010G261600 Sobic004G228800--Sobic010G261600 Sobic004G323700 Sobic004G323700 Sobic004G228800--Sobic004G323700 Sobic010G278200 Sobic010G278200 Sobic004G228800--Sobic010G278200 Sobic004G228800--Sobic004G236200 Sobic004G228800--Sobic006G131000 Sobic005G177700 Sobic005G177700 Sobic004G228800--Sobic005G177700 Sobic007G056600 Sobic007G056600 Sobic004G228800--Sobic007G056600 Sobic004G228800--Sobic003G126300 Sobic001G114000 Sobic001G114000 Sobic001G065000--Sobic001G114000 Sobic001G065000--Sobic001G281100 Sobic001G065000--Sobic006G012500 Sobic001G065000--Sobic001G534800 Sobic005G118600 Sobic005G118600 Sobic001G065000--Sobic005G118600 Sobic001G065000--Sobic008G099800 Sobic003G093800 Sobic003G093800 Sobic001G065000--Sobic003G093800 Sobic006G037700 Sobic006G037700 Sobic001G065000--Sobic006G037700 Sobic001G065000--Sobic003G229500 Sobic003G126300--Sobic004G228800 Sobic009G079300 Sobic009G079300 Sobic003G126300--Sobic009G079300 Sobic003G126300--Sobic004G004200 Sobic008G110600 Sobic008G110600 Sobic003G126300--Sobic008G110600 Sobic003G126300--Sobic004G261600 Sobic006G034000 Sobic006G034000 Sobic003G126300--Sobic006G034000 Sobic003G272400 Sobic003G272400 Sobic003G126300--Sobic003G272400 Sobic003G126300--Sobic007G056600 Sobic006G033200 Sobic006G033200 Sobic003G126300--Sobic006G033200 Sobic001G224600 Sobic001G224600 Sobic004G242500--Sobic001G224600 Sobic003G428400 Sobic003G428400 Sobic004G242500--Sobic003G428400 Sobic004G242500--Sobic002G156000 Sobic001G207400 Sobic001G207400 Sobic004G242500--Sobic001G207400 Sobic001G474700 Sobic001G474700 Sobic004G242500--Sobic001G474700 Sobic004G242500--Sobic007G200500 Sobic004G242500--Sobic001G413900 Sobic001G301700 Sobic001G301700 Sobic004G242500--Sobic001G301700 Sobic004G162400 Sobic004G162400 Sobic004G242500--Sobic004G162400
Octagon: transcription factors


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