Gene annotation
Transcriptome id Sobic.001G059100.1,Sobic.001G059100.2,Sobic.001G059100.3
Synonym Sb01g005370, GDH1
Functional annotation glutamate dehydrogenase protein, putative, expressed
UniProt A0A1Z5S4U3 , A0A1B6QHH2
Pfam PF02812 PF00208
Panther DB PTHR11606 PTHR11606:SF12
NCBI CDD -
KEGG Orthology K00261; GLUD1_2, glutamate dehydrogenase (NAD(P)+)
Gene Ontology GO:0016491; oxidoreductase activity GO:0006520cellular amino acid metabolic process


Orthologs (automatic annotation)
TAIR AT5G18170 : glutamate dehydrogenase 1
RAP-DB (Rice) LOC_Os03g58040.1,LOC_Os03g58040.3 : glutamate dehydrogenase protein, putative, expressed
MaizeGDB (Corn) Zm00025a008542
Brachypodium KQK12729 , PNT73977 , PNT73978 , PNT73979 , KQK12730 , KQK12731
Barley HORVU4Hr1G061100.2 , HORVU4Hr1G061100.1
Wheat TraesCS7B02G165800 , TraesCS5A02G434100 , TraesCS5D02G442000 , TraesCS5B02G437100 , TraesCS5B02G437100 , TraesCS7D02G412300
Populus -


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cDNA sequences
Sobic.001G059100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G078100 UPF0041 domain containing protein, putative, expressed -
2 Sobic.005G188100 peptidase, T1 family, putative, expressed K02729: 20S proteasome subunit alpha 5
3 Sobic.004G272800 VHS and GAT domain containing protein, expressed -
4 Sobic.001G236300 cell division control protein 48 homolog E, putative, expressed K13525: VCP, transitional endoplasmic reticulum ATPase
5 Sobic.004G276100 expressed protein -
6 Sobic.007G161400 Mpv17 / PMP22 family domain containing protein, expressed K13347: PXMP2, peroxisomal membrane protein 2
K13348: protein Mpv17
7 Sobic.004G051700 OTU-like cysteine protease family protein, putative, expressed K13719: OTU1, ubiquitin thioesterase OTU1
8 Sobic.002G155500 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
9 Sobic.001G048832 - -
10 Sobic.004G224900 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
11 Sobic.003G367451 - K08516: synaptobrevin homolog YKT6
12 Sobic.004G351500 - -
13 Sobic.007G186800 14-3-3 protein, putative, expressed K06630: 14-3-3 protein epsilon
14 Sobic.004G306200 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K01802: peptidylprolyl isomerase
15 Sobic.001G364500 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
16 Sobic.003G327900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@auxin-induced protein 5NG4, putative, expressed -
17 Sobic.002G060900 WD domain, G-beta repeat domain containing protein, expressed K14003: PREB, prolactin regulatory element-binding protein
18 Sobic.004G066600 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
19 Sobic.001G034700 actin-depolymerizing factor, putative, expressed K05765: cofilin
20 Sobic.003G219800 transferase family protein, putative, expressed -


Gene co-expression network
sample Sobic001G059100 Sobic001G059100 Sobic007G078100 Sobic007G078100 Sobic001G059100--Sobic007G078100 Sobic005G188100 Sobic005G188100 Sobic001G059100--Sobic005G188100 Sobic004G272800 Sobic004G272800 Sobic001G059100--Sobic004G272800 Sobic001G236300 Sobic001G236300 Sobic001G059100--Sobic001G236300 Sobic004G276100 Sobic004G276100 Sobic001G059100--Sobic004G276100 Sobic007G161400 Sobic007G161400 Sobic001G059100--Sobic007G161400 Sobic004G051700 Sobic004G051700 Sobic001G059100--Sobic004G051700 Sobic002G155500 Sobic002G155500 Sobic001G059100--Sobic002G155500 Sobic001G048832 Sobic001G048832 Sobic001G059100--Sobic001G048832 Sobic007G078100--Sobic004G276100 Sobic002G257300 Sobic002G257300 Sobic007G078100--Sobic002G257300 Sobic007G078100--Sobic007G161400 Sobic010G154700 Sobic010G154700 Sobic007G078100--Sobic010G154700 Sobic007G078100--Sobic004G272800 Sobic007G078100--Sobic004G051700 Sobic007G078100--Sobic005G188100 Sobic001G132100 Sobic001G132100 Sobic007G078100--Sobic001G132100 Sobic007G078100--Sobic001G048832 Sobic002G190900 Sobic002G190900 Sobic005G188100--Sobic002G190900 Sobic009G163800 Sobic009G163800 Sobic005G188100--Sobic009G163800 Sobic002G398901 Sobic002G398901 Sobic005G188100--Sobic002G398901 Sobic010G204500 Sobic010G204500 Sobic005G188100--Sobic010G204500 Sobic009G166500 Sobic009G166500 Sobic005G188100--Sobic009G166500 Sobic007G051000 Sobic007G051000 Sobic005G188100--Sobic007G051000 Sobic006G047400 Sobic006G047400 Sobic005G188100--Sobic006G047400 Sobic010G012500 Sobic010G012500 Sobic005G188100--Sobic010G012500 Sobic004G211833 Sobic004G211833 Sobic005G188100--Sobic004G211833 Sobic002G267500 Sobic002G267500 Sobic004G272800--Sobic002G267500 Sobic001G281400 Sobic001G281400 Sobic004G272800--Sobic001G281400 Sobic003G253000 Sobic003G253000 Sobic004G272800--Sobic003G253000 Sobic004G272800--Sobic001G048832 Sobic004G272800--Sobic002G190900 Sobic002G345300 Sobic002G345300 Sobic004G272800--Sobic002G345300 Sobic002G046100 Sobic002G046100 Sobic004G272800--Sobic002G046100 Sobic010G041600 Sobic010G041600 Sobic004G272800--Sobic010G041600 Sobic004G272800--Sobic005G188100 Sobic003G367451 Sobic003G367451 Sobic001G236300--Sobic003G367451 Sobic004G224900 Sobic004G224900 Sobic001G236300--Sobic004G224900 Sobic007G114200 Sobic007G114200 Sobic001G236300--Sobic007G114200 Sobic001G236300--Sobic004G272800 Sobic001G058100 Sobic001G058100 Sobic001G236300--Sobic001G058100 Sobic001G236300--Sobic001G132100 Sobic006G252200 Sobic006G252200 Sobic001G236300--Sobic006G252200 Sobic004G335000 Sobic004G335000 Sobic001G236300--Sobic004G335000 Sobic007G045600 Sobic007G045600 Sobic001G236300--Sobic007G045600 Sobic008G179500 Sobic008G179500 Sobic004G276100--Sobic008G179500 Sobic004G276100--Sobic004G272800 Sobic004G276100--Sobic007G078100 Sobic009G111600 Sobic009G111600 Sobic004G276100--Sobic009G111600 Sobic002G329100 Sobic002G329100 Sobic004G276100--Sobic002G329100 Sobic004G050000 Sobic004G050000 Sobic004G276100--Sobic004G050000 Sobic006G108400 Sobic006G108400 Sobic004G276100--Sobic006G108400 Sobic009G043600 Sobic009G043600 Sobic004G276100--Sobic009G043600 Sobic004G284500 Sobic004G284500 Sobic004G276100--Sobic004G284500 Sobic003G280400 Sobic003G280400 Sobic007G161400--Sobic003G280400 Sobic008G128900 Sobic008G128900 Sobic007G161400--Sobic008G128900 Sobic006G059700 Sobic006G059700 Sobic007G161400--Sobic006G059700 Sobic004G042000 Sobic004G042000 Sobic007G161400--Sobic004G042000 Sobic005G043000 Sobic005G043000 Sobic007G161400--Sobic005G043000 Sobic007G161400--Sobic007G078100 Sobic002G312900 Sobic002G312900 Sobic007G161400--Sobic002G312900 Sobic003G363800 Sobic003G363800 Sobic007G161400--Sobic003G363800 Sobic007G161400--Sobic004G051700 Sobic004G051700--Sobic010G012500 Sobic004G051700--Sobic002G190900 Sobic004G051700--Sobic001G048832 Sobic004G051700--Sobic007G051000 Sobic004G051700--Sobic004G211833 Sobic004G051700--Sobic002G398901 Sobic004G051700--Sobic002G257300 Sobic002G175100 Sobic002G175100 Sobic004G051700--Sobic002G175100 Sobic004G051700--Sobic010G204500 Sobic004G225500 Sobic004G225500 Sobic002G155500--Sobic004G225500 Sobic010G121300 Sobic010G121300 Sobic002G155500--Sobic010G121300 Sobic004G351500 Sobic004G351500 Sobic002G155500--Sobic004G351500 Sobic002G155500--Sobic007G078100 Sobic002G155500--Sobic004G272800 Sobic002G155500--Sobic001G048832 Sobic002G155500--Sobic004G276100 Sobic002G153500 Sobic002G153500 Sobic002G155500--Sobic002G153500 Sobic002G233100 Sobic002G233100 Sobic002G155500--Sobic002G233100 Sobic001G048832--Sobic010G154700 Sobic001G048832--Sobic001G132100 Sobic001G048832--Sobic007G051000 Sobic009G176000 Sobic009G176000 Sobic001G048832--Sobic009G176000 Sobic001G048832--Sobic005G188100 Sobic001G048832--Sobic002G190900 Sobic009G119900 Sobic009G119900 Sobic001G048832--Sobic009G119900 Sobic001G048832--Sobic004G272800 Sobic001G048832--Sobic002G398901
Octagon: transcription factors


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