Gene annotation
Transcriptome id Sobic.001G086700.1
Synonym Sb01g007810
Functional annotation expressed protein
UniProt A0A1B6QHZ7
Pfam -
Panther DB PTHR33127 PTHR33127:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g66260.1 : expressed protein
MaizeGDB (Corn) Zm00025a041982 , Zm00025a041979 , Zm00025a013206 , Zm00025a013204
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G158401 - -
2 Sobic.004G149500 expressed protein -
3 Sobic.002G399400 expressed protein -
4 Sobic.003G177600 tetratricopeptide repeat containing protein, putative, expressed -
5 Sobic.010G238300 - -
6 Sobic.004G093100 protein kinase family protein, putative, expressed -
7 Sobic.001G359000 expressed protein -
8 Sobic.001G435700 HVA22, putative, expressed K17338: receptor expression-enhancing protein 1/2/3/4
9 Sobic.010G253600 OsFBL18 - F-box domain and LRR containing protein, expressed -
10 Sobic.002G121450 - -
11 Sobic.004G158600 expressed protein -
12 Sobic.002G022700 CSLC10 - cellulose synthase-like family C, expressed -
13 Sobic.010G010201 - -
14 Sobic.010G030200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@homeobox associated leucine zipper, putative, expressed -
15 Sobic.003G376900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed -
16 Sobic.006G166400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ELMO/CED-12 family protein, putative, expressed -
17 Sobic.001G099700 Invertase genes(PubMedID : 24456189)@Sugar degradation(PubMedID : 27330561)@glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
18 Sobic.008G098164 - -
19 Sobic.001G135800 pentatricopeptide, putative, expressed -
20 Sobic.008G071400 no apical meristem protein, putative, expressed -


Gene co-expression network
sample Sobic001G086700 Sobic001G086700 Sobic002G158401 Sobic002G158401 Sobic001G086700--Sobic002G158401 Sobic004G149500 Sobic004G149500 Sobic001G086700--Sobic004G149500 Sobic002G399400 Sobic002G399400 Sobic001G086700--Sobic002G399400 Sobic003G177600 Sobic003G177600 Sobic001G086700--Sobic003G177600 Sobic010G238300 Sobic010G238300 Sobic001G086700--Sobic010G238300 Sobic004G093100 Sobic004G093100 Sobic001G086700--Sobic004G093100 Sobic001G359000 Sobic001G359000 Sobic001G086700--Sobic001G359000 Sobic001G435700 Sobic001G435700 Sobic001G086700--Sobic001G435700 Sobic010G253600 Sobic010G253600 Sobic001G086700--Sobic010G253600 Sobic002G158401--Sobic004G149500 Sobic002G158401--Sobic010G238300 Sobic002G158401--Sobic004G093100 Sobic002G158401--Sobic001G359000 Sobic002G121450 Sobic002G121450 Sobic002G158401--Sobic002G121450 Sobic004G158600 Sobic004G158600 Sobic002G158401--Sobic004G158600 Sobic002G158401--Sobic001G435700 Sobic002G158401--Sobic010G253600 Sobic002G022700 Sobic002G022700 Sobic002G158401--Sobic002G022700 Sobic004G149500--Sobic002G158401 Sobic004G149500--Sobic010G238300 Sobic004G149500--Sobic004G093100 Sobic004G149500--Sobic001G359000 Sobic004G149500--Sobic002G121450 Sobic004G149500--Sobic004G158600 Sobic004G149500--Sobic001G435700 Sobic004G149500--Sobic010G253600 Sobic004G149500--Sobic002G022700 Sobic010G043250 Sobic010G043250 Sobic002G399400--Sobic010G043250 Sobic005G074300 Sobic005G074300 Sobic002G399400--Sobic005G074300 Sobic003G133100 Sobic003G133100 Sobic002G399400--Sobic003G133100 Sobic003G270900 Sobic003G270900 Sobic002G399400--Sobic003G270900 Sobic002G096700 Sobic002G096700 Sobic002G399400--Sobic002G096700 Sobic008G050900 Sobic008G050900 Sobic002G399400--Sobic008G050900 Sobic002G113200 Sobic002G113200 Sobic002G399400--Sobic002G113200 Sobic002G305200 Sobic002G305200 Sobic002G399400--Sobic002G305200 Sobic008G071300 Sobic008G071300 Sobic002G399400--Sobic008G071300 Sobic010G090000 Sobic010G090000 Sobic003G177600--Sobic010G090000 Sobic004G256100 Sobic004G256100 Sobic003G177600--Sobic004G256100 Sobic003G102100 Sobic003G102100 Sobic003G177600--Sobic003G102100 Sobic003G177600--Sobic004G158600 Sobic001G474100 Sobic001G474100 Sobic003G177600--Sobic001G474100 Sobic007G193600 Sobic007G193600 Sobic003G177600--Sobic007G193600 Sobic001G015000 Sobic001G015000 Sobic003G177600--Sobic001G015000 Sobic001G502100 Sobic001G502100 Sobic003G177600--Sobic001G502100 Sobic001G103600 Sobic001G103600 Sobic003G177600--Sobic001G103600 Sobic010G238300--Sobic010G253600 Sobic010G238300--Sobic004G093100 Sobic010G010201 Sobic010G010201 Sobic010G238300--Sobic010G010201 Sobic001G135800 Sobic001G135800 Sobic010G238300--Sobic001G135800 Sobic006G115700 Sobic006G115700 Sobic010G238300--Sobic006G115700 Sobic007G142801 Sobic007G142801 Sobic010G238300--Sobic007G142801 Sobic010G142401 Sobic010G142401 Sobic010G238300--Sobic010G142401 Sobic008G071400 Sobic008G071400 Sobic010G238300--Sobic008G071400 Sobic006G066100 Sobic006G066100 Sobic010G238300--Sobic006G066100 Sobic004G093100--Sobic008G071400 Sobic004G093100--Sobic010G238300 Sobic004G093100--Sobic010G253600 Sobic004G093100--Sobic006G115700 Sobic004G093100--Sobic010G010201 Sobic002G084700 Sobic002G084700 Sobic004G093100--Sobic002G084700 Sobic004G093100--Sobic001G135800 Sobic001G432200 Sobic001G432200 Sobic004G093100--Sobic001G432200 Sobic006G204500 Sobic006G204500 Sobic004G093100--Sobic006G204500 Sobic001G359000--Sobic004G149500 Sobic001G359000--Sobic002G158401 Sobic001G359000--Sobic004G158600 Sobic009G168100 Sobic009G168100 Sobic001G359000--Sobic009G168100 Sobic006G014632 Sobic006G014632 Sobic001G359000--Sobic006G014632 Sobic001G359000--Sobic010G090000 Sobic001G359000--Sobic003G177600 Sobic008G163900 Sobic008G163900 Sobic001G359000--Sobic008G163900 Sobic001G359000--Sobic003G102100 Sobic008G171900 Sobic008G171900 Sobic001G435700--Sobic008G171900 Sobic009G163100 Sobic009G163100 Sobic001G435700--Sobic009G163100 Sobic008G156600 Sobic008G156600 Sobic001G435700--Sobic008G156600 Sobic001G435700--Sobic004G093100 Sobic005G020600 Sobic005G020600 Sobic001G435700--Sobic005G020600 Sobic004G241300 Sobic004G241300 Sobic001G435700--Sobic004G241300 Sobic003G376900 Sobic003G376900 Sobic001G435700--Sobic003G376900 Sobic005G050400 Sobic005G050400 Sobic001G435700--Sobic005G050400 Sobic001G435700--Sobic010G238300 Sobic010G253600--Sobic010G238300 Sobic010G253600--Sobic001G135800 Sobic010G253600--Sobic007G142801 Sobic010G253600--Sobic010G142401 Sobic010G253600--Sobic006G115700 Sobic010G253600--Sobic010G010201 Sobic001G172100 Sobic001G172100 Sobic010G253600--Sobic001G172100 Sobic003G297100 Sobic003G297100 Sobic010G253600--Sobic003G297100 Sobic005G002100 Sobic005G002100 Sobic010G253600--Sobic005G002100
Octagon: transcription factors


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