Gene annotation
Transcriptome id Sobic.001G089000.1
Synonym Sb01g008030
Functional annotation periplasmic beta-glucosidase precursor, putative, expressed
UniProt A0A1B6QHZ6
Pfam PF01915 PF00933
Panther DB PTHR30620 PTHR30620:SF38
NCBI CDD -
KEGG Orthology K01188; beta-glucosidase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G20950 : Glycosyl hydrolase family protein
RAP-DB (Rice) LOC_Os03g53860.1 : periplasmic beta-glucosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a016800 , Zm00025a016801 , Zm00025a008146 , Zm00025a008148 , Zm00025a034995
Brachypodium KQK13208 , KQK13203 , KQK13202 , KQK13201 , KQK13200 , KQK13199
Barley HORVU5Hr1G095220.1 , HORVU5Hr1G095220.3 , HORVU5Hr1G095220.2 , HORVU5Hr1G095220.5 , HORVU5Hr1G095220.4 , HORVU5Hr1G095130.1 , HORVU5Hr1G095130.3 , HORVU5Hr1G095130.2 , HORVU5Hr1G095060.22 , HORVU5Hr1G095130.4 , HORVU5Hr1G095060.20 , HORVU5Hr1G095130.9 , HORVU5Hr1G095130.8 , HORVU5Hr1G095040.1 , HORVU1Hr1G073280.3 , HORVU1Hr1G073280.1 , HORVU5Hr1G095130.5 , HORVU1Hr1G073280.4 , HORVU5Hr1G095130.7 , HORVU5Hr1G095130.6 , HORVU2Hr1G107600.6 , HORVU2Hr1G107600.7 , HORVU2Hr1G107600.1 , HORVU1Hr1G073280.9 , HORVU1Hr1G073280.8 , HORVU1Hr1G073280.2 , HORVU1Hr1G073280.6 , HORVU1Hr1G073280.5 , HORVU2Hr1G119350.1 , HORVU2Hr1G119350.3 , HORVU2Hr1G119350.2 , HORVU2Hr1G119350.4 , HORVU3Hr1G034870.5 , HORVU3Hr1G034870.3 , HORVU3Hr1G034870.2 , HORVU3Hr1G034870.1 , HORVU5Hr1G095130.15 , HORVU5Hr1G095130.14 , HORVU5Hr1G095130.17 , HORVU5Hr1G095130.16 , HORVU5Hr1G095130.11 , HORVU5Hr1G095130.13 , HORVU5Hr1G095130.12 , HORVU5Hr1G095130.18 , HORVU5Hr1G095060.7 , HORVU5Hr1G095060.6 , HORVU5Hr1G095060.5 , HORVU5Hr1G095060.4 , HORVU5Hr1G095060.3 , HORVU5Hr1G095060.9 , HORVU5Hr1G095060.8 , HORVU5Hr1G095060.19 , HORVU5Hr1G095060.18 , HORVU5Hr1G095060.17 , HORVU5Hr1G095060.16 , HORVU5Hr1G095060.14 , HORVU5Hr1G095060.13 , HORVU5Hr1G095060.11 , HORVU5Hr1G095060.10
Wheat TraesCS2B02G503000 , TraesCS2B02G503000 , TraesCS5D02G399000 , TraesCS5D02G399000 , TraesCS5D02G399000 , TraesCS2D02G562400 , TraesCS5D02G398300 , TraesCS5D02G398300 , TraesCS5D02G398900 , TraesCS2A02G591900 , TraesCS3B02G203300 , TraesCS3B02G203300 , TraesCS5B02G393800 , TraesCS5B02G394300 , TraesCS2B02G591900 , TraesCS2B02G591900 , TraesCS5B02G394200 , TraesCS5B02G394200 , TraesCS5B02G394200 , TraesCS2D02G477800 , TraesCS5B02G394000 , TraesCS2A02G478500 , TraesCS5A02G389100 , TraesCS5D02G399100 , TraesCS5A02G388200 , TraesCS1D02G278300 , TraesCS1D02G278300 , TraesCS5A02G388400 , TraesCS1D02G278300 , TraesCS5A02G389000 , TraesCS5A02G389000 , TraesCS5A02G389000 , TraesCS5B02G393300 , TraesCS5B02G393300 , TraesCS3A02G172500
Populus -


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cDNA sequences
Sobic.001G089000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G017800 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
2 Sobic.004G246200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dihydroorotate dihydrogenase protein, putative, expressed K00207: dihydropyrimidine dehydrogenase (NADP+)
3 Sobic.001G512800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase
4 Sobic.007G219900 uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
5 Sobic.006G126400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@exonuclease, putative, expressed -
6 Sobic.005G151700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed K16292: CEP, KDEL-tailed cysteine endopeptidase
7 Sobic.005G018500 NAC domain transcription factor, putative, expressed -
8 Sobic.002G245300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@citrate transporter, putative, expressed K14445: solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
9 Sobic.003G366400 uricase, putative, expressed K00365: urate oxidase
10 Sobic.007G041400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF1336 domain containing protein, expressed -
11 Sobic.003G138200 expressed protein -
12 Sobic.001G151000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@amino acid permease, putative, expressed K13863: SLC7A1, solute carrier family 7 (cationic amino acid transporter), member 1
13 Sobic.003G329400 dihydropyrimidinase, putative, expressed K01464: DPYS, dht, dihydropyrimidinase
14 Sobic.005G152100 aminotransferase, classes I and II, domain containing protein, expressed K00815: tyrosine aminotransferase
15 Sobic.009G054500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@lipase, putative, expressed -
16 Sobic.004G074500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@amino acid transporter, putative, expressed K14207: SLC38A2, solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2
17 Sobic.007G187300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.003G259200 -(PubMedID : 26976818)@uncharacterized kinase mug58, putative, expressed K15918: D-glycerate 3-kinase
19 Sobic.001G111150 - K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
20 Sobic.008G044000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic001G089000 Sobic001G089000 Sobic008G017800 Sobic008G017800 Sobic001G089000--Sobic008G017800 Sobic004G246200 Sobic004G246200 Sobic001G089000--Sobic004G246200 Sobic001G512800 Sobic001G512800 Sobic001G089000--Sobic001G512800 Sobic007G219900 Sobic007G219900 Sobic001G089000--Sobic007G219900 Sobic006G126400 Sobic006G126400 Sobic001G089000--Sobic006G126400 Sobic005G151700 Sobic005G151700 Sobic001G089000--Sobic005G151700 Sobic005G018500 Sobic005G018500 Sobic001G089000--Sobic005G018500 Sobic002G245300 Sobic002G245300 Sobic001G089000--Sobic002G245300 Sobic003G366400 Sobic003G366400 Sobic001G089000--Sobic003G366400 Sobic007G068100 Sobic007G068100 Sobic008G017800--Sobic007G068100 Sobic001G325200 Sobic001G325200 Sobic008G017800--Sobic001G325200 Sobic003G329400 Sobic003G329400 Sobic008G017800--Sobic003G329400 Sobic003G148800 Sobic003G148800 Sobic008G017800--Sobic003G148800 Sobic001G474500 Sobic001G474500 Sobic008G017800--Sobic001G474500 Sobic009G211400 Sobic009G211400 Sobic008G017800--Sobic009G211400 Sobic008G017800--Sobic003G366400 Sobic008G017800--Sobic007G219900 Sobic009G057300 Sobic009G057300 Sobic008G017800--Sobic009G057300 Sobic005G152100 Sobic005G152100 Sobic004G246200--Sobic005G152100 Sobic004G246200--Sobic005G018500 Sobic003G259200 Sobic003G259200 Sobic004G246200--Sobic003G259200 Sobic004G255000 Sobic004G255000 Sobic004G246200--Sobic004G255000 Sobic001G412700 Sobic001G412700 Sobic004G246200--Sobic001G412700 Sobic004G260000 Sobic004G260000 Sobic004G246200--Sobic004G260000 Sobic002G322900 Sobic002G322900 Sobic004G246200--Sobic002G322900 Sobic009G054500 Sobic009G054500 Sobic004G246200--Sobic009G054500 Sobic008G024400 Sobic008G024400 Sobic004G246200--Sobic008G024400 Sobic003G138200 Sobic003G138200 Sobic001G512800--Sobic003G138200 Sobic001G512800--Sobic002G322900 Sobic010G206000 Sobic010G206000 Sobic001G512800--Sobic010G206000 Sobic001G512800--Sobic004G246200 Sobic002G409500 Sobic002G409500 Sobic001G512800--Sobic002G409500 Sobic009G029600 Sobic009G029600 Sobic001G512800--Sobic009G029600 Sobic010G248900 Sobic010G248900 Sobic001G512800--Sobic010G248900 Sobic001G512800--Sobic009G054500 Sobic005G079900 Sobic005G079900 Sobic001G512800--Sobic005G079900 Sobic006G127100 Sobic006G127100 Sobic007G219900--Sobic006G127100 Sobic007G219900--Sobic005G018500 Sobic007G219900--Sobic003G366400 Sobic007G219900--Sobic009G054500 Sobic007G219900--Sobic003G148800 Sobic007G219900--Sobic004G260000 Sobic002G215700 Sobic002G215700 Sobic007G219900--Sobic002G215700 Sobic009G226300 Sobic009G226300 Sobic007G219900--Sobic009G226300 Sobic001G227800 Sobic001G227800 Sobic007G219900--Sobic001G227800 Sobic003G441100 Sobic003G441100 Sobic006G126400--Sobic003G441100 Sobic010G016800 Sobic010G016800 Sobic006G126400--Sobic010G016800 Sobic001G251900 Sobic001G251900 Sobic006G126400--Sobic001G251900 Sobic004G006966 Sobic004G006966 Sobic006G126400--Sobic004G006966 Sobic001G101400 Sobic001G101400 Sobic006G126400--Sobic001G101400 Sobic010G098100 Sobic010G098100 Sobic005G151700--Sobic010G098100 Sobic001G483500 Sobic001G483500 Sobic005G151700--Sobic001G483500 Sobic007G187300 Sobic007G187300 Sobic005G151700--Sobic007G187300 Sobic005G151700--Sobic003G259200 Sobic003G219600 Sobic003G219600 Sobic005G151700--Sobic003G219600 Sobic005G151700--Sobic009G211400 Sobic001G249300 Sobic001G249300 Sobic005G151700--Sobic001G249300 Sobic005G151700--Sobic005G018500 Sobic005G151700--Sobic009G029600 Sobic005G018500--Sobic009G054500 Sobic005G018500--Sobic004G260000 Sobic005G018500--Sobic004G255000 Sobic005G018500--Sobic003G259200 Sobic005G018500--Sobic009G226300 Sobic005G018500--Sobic001G249300 Sobic005G018500--Sobic003G148800 Sobic005G018500--Sobic003G219600 Sobic005G018500--Sobic007G187300 Sobic006G052100 Sobic006G052100 Sobic002G245300--Sobic006G052100 Sobic010G078100 Sobic010G078100 Sobic002G245300--Sobic010G078100 Sobic003G009100 Sobic003G009100 Sobic002G245300--Sobic003G009100 Sobic002G245300--Sobic007G219900 Sobic001G148300 Sobic001G148300 Sobic002G245300--Sobic001G148300 Sobic001G447500 Sobic001G447500 Sobic002G245300--Sobic001G447500 Sobic004G169700 Sobic004G169700 Sobic002G245300--Sobic004G169700 Sobic003G401200 Sobic003G401200 Sobic002G245300--Sobic003G401200 Sobic006G214500 Sobic006G214500 Sobic002G245300--Sobic006G214500 Sobic003G366400--Sobic007G219900 Sobic003G366400--Sobic003G401200 Sobic003G366400--Sobic002G215700 Sobic003G366400--Sobic004G260000 Sobic003G366400--Sobic001G227800 Sobic003G366400--Sobic004G246200 Sobic003G366400--Sobic005G018500 Sobic004G101900 Sobic004G101900 Sobic003G366400--Sobic004G101900 Sobic003G366400--Sobic009G211400
Octagon: transcription factors


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