Gene annotation
Transcriptome id Sobic.001G155800.1
Synonym AtRLP29, RLP29, Sb01g013570
Functional annotation leucine-rich repeat family protein, putative, expressed
UniProt C5WR71
Pfam PF00560 PF13855
Panther DB PTHR27000 PTHR27000:SF45
NCBI CDD KOG0617; Ras suppressor protein (contains leucine-rich repeats)
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G42800 : receptor like protein 29
RAP-DB (Rice) LOC_Os01g52880.1 : leucine-rich repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a007278 , Zm00025a044017
Brachypodium KQK13989
Barley HORVU5Hr1G092930.1 , HORVU5Hr1G092930.2 , HORVU5Hr1G092930.3
Wheat TraesCS5B02G376600 , TraesCS5A02G374600 , TraesCS5A02G374600 , TraesCS5D02G384300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G259300 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
2 Sobic.003G381500 OsFBX411 - F-box domain containing protein, expressed -
3 Sobic.010G165800 - -
4 Sobic.005G153000 agenet domain containing protein, expressed -
5 Sobic.003G024000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide-N4-asparagine amidase A, putative, expressed -
6 Sobic.007G187700 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
7 Sobic.004G162900 expressed protein -
8 Sobic.005G157300 protein binding protein, putative, expressed -
9 Sobic.003G236150 - -
10 Sobic.009G077300 protein kinase, putative, expressed -
11 Sobic.001G515200 - -
12 Sobic.002G168000 expressed protein -
13 Sobic.003G226700 kinesin motor domain containing protein, putative, expressed K10393: KIF2_24, kinesin family member 2/24
14 Sobic.010G250400 OsSub52 - Putative Subtilisin homologue, expressed -
15 Sobic.006G129400 - -
16 Sobic.002G131100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@N-rich protein, putative, expressed -
17 Sobic.001G238900 OsFBX386 - F-box domain containing protein, expressed -
18 Sobic.009G225500 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
19 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
20 Sobic.010G177100 expressed protein -


Gene co-expression network
sample Sobic001G155800 Sobic001G155800 Sobic003G259300 Sobic003G259300 Sobic001G155800--Sobic003G259300 Sobic003G381500 Sobic003G381500 Sobic001G155800--Sobic003G381500 Sobic010G165800 Sobic010G165800 Sobic001G155800--Sobic010G165800 Sobic005G153000 Sobic005G153000 Sobic001G155800--Sobic005G153000 Sobic003G024000 Sobic003G024000 Sobic001G155800--Sobic003G024000 Sobic007G187700 Sobic007G187700 Sobic001G155800--Sobic007G187700 Sobic004G162900 Sobic004G162900 Sobic001G155800--Sobic004G162900 Sobic005G157300 Sobic005G157300 Sobic001G155800--Sobic005G157300 Sobic003G236150 Sobic003G236150 Sobic001G155800--Sobic003G236150 Sobic001G425700 Sobic001G425700 Sobic003G259300--Sobic001G425700 Sobic009G225500 Sobic009G225500 Sobic003G259300--Sobic009G225500 Sobic002G006100 Sobic002G006100 Sobic003G259300--Sobic002G006100 Sobic009G127800 Sobic009G127800 Sobic003G259300--Sobic009G127800 Sobic006G272800 Sobic006G272800 Sobic003G259300--Sobic006G272800 Sobic003G259300--Sobic005G153000 Sobic001G054700 Sobic001G054700 Sobic003G259300--Sobic001G054700 Sobic004G234500 Sobic004G234500 Sobic003G259300--Sobic004G234500 Sobic003G226700 Sobic003G226700 Sobic003G259300--Sobic003G226700 Sobic005G143100 Sobic005G143100 Sobic003G381500--Sobic005G143100 Sobic003G013800 Sobic003G013800 Sobic003G381500--Sobic003G013800 Sobic005G104300 Sobic005G104300 Sobic003G381500--Sobic005G104300 Sobic003G381500--Sobic005G157300 Sobic003G292700 Sobic003G292700 Sobic003G381500--Sobic003G292700 Sobic001G377700 Sobic001G377700 Sobic003G381500--Sobic001G377700 Sobic003G381500--Sobic001G155800 Sobic002G317700 Sobic002G317700 Sobic003G381500--Sobic002G317700 Sobic001G025900 Sobic001G025900 Sobic003G381500--Sobic001G025900 Sobic009G081800 Sobic009G081800 Sobic010G165800--Sobic009G081800 Sobic010G165900 Sobic010G165900 Sobic010G165800--Sobic010G165900 Sobic007G112100 Sobic007G112100 Sobic010G165800--Sobic007G112100 Sobic001G530100 Sobic001G530100 Sobic010G165800--Sobic001G530100 Sobic006G095300 Sobic006G095300 Sobic010G165800--Sobic006G095300 Sobic004G291200 Sobic004G291200 Sobic010G165800--Sobic004G291200 Sobic001G506300 Sobic001G506300 Sobic010G165800--Sobic001G506300 Sobic001G532800 Sobic001G532800 Sobic010G165800--Sobic001G532800 Sobic002G286632 Sobic002G286632 Sobic010G165800--Sobic002G286632 Sobic009G077300 Sobic009G077300 Sobic005G153000--Sobic009G077300 Sobic002G168000 Sobic002G168000 Sobic005G153000--Sobic002G168000 Sobic004G282601 Sobic004G282601 Sobic005G153000--Sobic004G282601 Sobic010G037901 Sobic010G037901 Sobic005G153000--Sobic010G037901 Sobic003G290400 Sobic003G290400 Sobic005G153000--Sobic003G290400 Sobic005G153000--Sobic007G187700 Sobic006G221300 Sobic006G221300 Sobic005G153000--Sobic006G221300 Sobic003G129500 Sobic003G129500 Sobic005G153000--Sobic003G129500 Sobic005G196600 Sobic005G196600 Sobic005G153000--Sobic005G196600 Sobic003G024000--Sobic001G425700 Sobic001G199500 Sobic001G199500 Sobic003G024000--Sobic001G199500 Sobic006G281900 Sobic006G281900 Sobic003G024000--Sobic006G281900 Sobic003G024000--Sobic003G226700 Sobic003G024000--Sobic001G054700 Sobic003G420300 Sobic003G420300 Sobic003G024000--Sobic003G420300 Sobic006G084300 Sobic006G084300 Sobic003G024000--Sobic006G084300 Sobic008G083500 Sobic008G083500 Sobic003G024000--Sobic008G083500 Sobic003G024000--Sobic003G292700 Sobic007G187700--Sobic002G168000 Sobic002G021200 Sobic002G021200 Sobic007G187700--Sobic002G021200 Sobic007G187700--Sobic005G153000 Sobic001G104500 Sobic001G104500 Sobic007G187700--Sobic001G104500 Sobic007G187700--Sobic001G377700 Sobic006G275500 Sobic006G275500 Sobic007G187700--Sobic006G275500 Sobic004G317000 Sobic004G317000 Sobic007G187700--Sobic004G317000 Sobic007G187700--Sobic004G282601 Sobic007G187700--Sobic009G077300 Sobic004G162900--Sobic006G221300 Sobic002G279400 Sobic002G279400 Sobic004G162900--Sobic002G279400 Sobic007G201900 Sobic007G201900 Sobic004G162900--Sobic007G201900 Sobic004G162900--Sobic001G054700 Sobic009G002200 Sobic009G002200 Sobic004G162900--Sobic009G002200 Sobic004G162900--Sobic009G077300 Sobic004G162900--Sobic009G127800 Sobic010G003300 Sobic010G003300 Sobic004G162900--Sobic010G003300 Sobic004G162900--Sobic005G153000 Sobic009G143200 Sobic009G143200 Sobic005G157300--Sobic009G143200 Sobic003G055600 Sobic003G055600 Sobic005G157300--Sobic003G055600 Sobic003G183700 Sobic003G183700 Sobic005G157300--Sobic003G183700 Sobic005G157300--Sobic001G377700 Sobic005G157300--Sobic001G054700 Sobic005G157300--Sobic006G221300 Sobic005G157300--Sobic007G187700 Sobic009G172950 Sobic009G172950 Sobic005G157300--Sobic009G172950 Sobic005G157300--Sobic009G127800 Sobic007G199800 Sobic007G199800 Sobic003G236150--Sobic007G199800 Sobic003G236150--Sobic006G281900 Sobic003G236150--Sobic007G187700 Sobic007G050800 Sobic007G050800 Sobic003G236150--Sobic007G050800 Sobic003G236150--Sobic002G168000 Sobic010G175000 Sobic010G175000 Sobic003G236150--Sobic010G175000 Sobic006G262501 Sobic006G262501 Sobic003G236150--Sobic006G262501 Sobic001G264201 Sobic001G264201 Sobic003G236150--Sobic001G264201 Sobic003G236150--Sobic003G290400
Octagon: transcription factors


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