Gene annotation
Transcriptome id Sobic.006G129400.1
Synonym
Functional annotation -
UniProt A0A1B6PLT0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G094100 expressed protein -
2 Sobic.002G236700 TMV-MP30 binding protein 2C, putative, expressed -
3 Sobic.001G238900 OsFBX386 - F-box domain containing protein, expressed -
4 Sobic.001G532800 RNA recognition motif containing protein, putative, expressed K12893: splicing factor, arginine/serine-rich 4/5/6
5 Sobic.009G109300 POLA4 - Putative DNA polymerase alpha complex subunit, expressed K02684: DNA primase small subunit
6 Sobic.007G218100 transmembrane receptor, putative, expressed -
7 Sobic.002G092200 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
8 Sobic.001G412500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K18732: SARNP, CIP29, SAP domain-containing ribonucleoprotein
9 Sobic.004G208100 expressed protein -
10 Sobic.002G230800 expressed protein -
11 Sobic.001G155800 leucine-rich repeat family protein, putative, expressed -
12 Sobic.001G290500 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
13 Sobic.006G281900 down-regulated TF in developmental senescence(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
14 Sobic.006G275500 regulator of chromosome condensation, putative, expressed -
15 Sobic.010G191000 expressed protein -
16 Sobic.008G135500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.002G315400 expressed protein -
18 Sobic.009G188900 acyltransferase, putative, expressed K13513: LCLAT1, lysocardiolipin and lysophospholipid acyltransferase
19 Sobic.002G300000 expansin precursor, putative, expressed -
20 Sobic.001G104500 growth-regulating factor, putative, expressed -


Gene co-expression network
sample Sobic006G129400 Sobic006G129400 Sobic006G094100 Sobic006G094100 Sobic006G129400--Sobic006G094100 Sobic002G236700 Sobic002G236700 Sobic006G129400--Sobic002G236700 Sobic001G238900 Sobic001G238900 Sobic006G129400--Sobic001G238900 Sobic001G532800 Sobic001G532800 Sobic006G129400--Sobic001G532800 Sobic009G109300 Sobic009G109300 Sobic006G129400--Sobic009G109300 Sobic007G218100 Sobic007G218100 Sobic006G129400--Sobic007G218100 Sobic002G092200 Sobic002G092200 Sobic006G129400--Sobic002G092200 Sobic001G412500 Sobic001G412500 Sobic006G129400--Sobic001G412500 Sobic004G208100 Sobic004G208100 Sobic006G129400--Sobic004G208100 Sobic001G290500 Sobic001G290500 Sobic006G094100--Sobic001G290500 Sobic006G275500 Sobic006G275500 Sobic006G094100--Sobic006G275500 Sobic001G140700 Sobic001G140700 Sobic006G094100--Sobic001G140700 Sobic006G094100--Sobic009G109300 Sobic004G330600 Sobic004G330600 Sobic006G094100--Sobic004G330600 Sobic009G188900 Sobic009G188900 Sobic006G094100--Sobic009G188900 Sobic002G230800 Sobic002G230800 Sobic006G094100--Sobic002G230800 Sobic010G250400 Sobic010G250400 Sobic006G094100--Sobic010G250400 Sobic006G196600 Sobic006G196600 Sobic006G094100--Sobic006G196600 Sobic002G246900 Sobic002G246900 Sobic002G236700--Sobic002G246900 Sobic002G236700--Sobic001G140700 Sobic002G236700--Sobic001G532800 Sobic003G107200 Sobic003G107200 Sobic002G236700--Sobic003G107200 Sobic002G236700--Sobic009G109300 Sobic007G112100 Sobic007G112100 Sobic002G236700--Sobic007G112100 Sobic002G315400 Sobic002G315400 Sobic002G236700--Sobic002G315400 Sobic002G236700--Sobic007G218100 Sobic010G191000 Sobic010G191000 Sobic002G236700--Sobic010G191000 Sobic003G244000 Sobic003G244000 Sobic001G238900--Sobic003G244000 Sobic001G238900--Sobic002G230800 Sobic001G105800 Sobic001G105800 Sobic001G238900--Sobic001G105800 Sobic001G238900--Sobic002G246900 Sobic002G223900 Sobic002G223900 Sobic001G238900--Sobic002G223900 Sobic001G238900--Sobic009G109300 Sobic004G317000 Sobic004G317000 Sobic001G238900--Sobic004G317000 Sobic001G118800 Sobic001G118800 Sobic001G238900--Sobic001G118800 Sobic001G169800 Sobic001G169800 Sobic001G238900--Sobic001G169800 Sobic001G532800--Sobic007G218100 Sobic001G532800--Sobic007G112100 Sobic001G532800--Sobic002G236700 Sobic001G532800--Sobic010G250400 Sobic001G532800--Sobic002G230800 Sobic002G158500 Sobic002G158500 Sobic001G532800--Sobic002G158500 Sobic003G147500 Sobic003G147500 Sobic001G532800--Sobic003G147500 Sobic001G532800--Sobic009G109300 Sobic008G100700 Sobic008G100700 Sobic001G532800--Sobic008G100700 Sobic009G109300--Sobic007G112100 Sobic006G051000 Sobic006G051000 Sobic009G109300--Sobic006G051000 Sobic010G103700 Sobic010G103700 Sobic009G109300--Sobic010G103700 Sobic006G195500 Sobic006G195500 Sobic009G109300--Sobic006G195500 Sobic009G109300--Sobic001G238900 Sobic009G109300--Sobic002G230800 Sobic003G183700 Sobic003G183700 Sobic009G109300--Sobic003G183700 Sobic003G179500 Sobic003G179500 Sobic009G109300--Sobic003G179500 Sobic009G109300--Sobic002G246900 Sobic007G218100--Sobic001G532800 Sobic001G304800 Sobic001G304800 Sobic007G218100--Sobic001G304800 Sobic004G052200 Sobic004G052200 Sobic007G218100--Sobic004G052200 Sobic007G218100--Sobic002G230800 Sobic003G246800 Sobic003G246800 Sobic007G218100--Sobic003G246800 Sobic007G218100--Sobic006G275500 Sobic002G392500 Sobic002G392500 Sobic007G218100--Sobic002G392500 Sobic001G104500 Sobic001G104500 Sobic007G218100--Sobic001G104500 Sobic008G159901 Sobic008G159901 Sobic007G218100--Sobic008G159901 Sobic002G092200--Sobic002G315400 Sobic010G265900 Sobic010G265900 Sobic002G092200--Sobic010G265900 Sobic003G412800 Sobic003G412800 Sobic002G092200--Sobic003G412800 Sobic003G249900 Sobic003G249900 Sobic002G092200--Sobic003G249900 Sobic004G095700 Sobic004G095700 Sobic002G092200--Sobic004G095700 Sobic002G300000 Sobic002G300000 Sobic002G092200--Sobic002G300000 Sobic006G200000 Sobic006G200000 Sobic002G092200--Sobic006G200000 Sobic002G351100 Sobic002G351100 Sobic002G092200--Sobic002G351100 Sobic005G080900 Sobic005G080900 Sobic002G092200--Sobic005G080900 Sobic009G165500 Sobic009G165500 Sobic001G412500--Sobic009G165500 Sobic003G084300 Sobic003G084300 Sobic001G412500--Sobic003G084300 Sobic004G343600 Sobic004G343600 Sobic001G412500--Sobic004G343600 Sobic006G013900 Sobic006G013900 Sobic001G412500--Sobic006G013900 Sobic001G412500--Sobic004G208100 Sobic001G107300 Sobic001G107300 Sobic001G412500--Sobic001G107300 Sobic001G150033 Sobic001G150033 Sobic001G412500--Sobic001G150033 Sobic001G261549 Sobic001G261549 Sobic001G412500--Sobic001G261549 Sobic001G528600 Sobic001G528600 Sobic001G412500--Sobic001G528600 Sobic010G021900 Sobic010G021900 Sobic004G208100--Sobic010G021900 Sobic003G444300 Sobic003G444300 Sobic004G208100--Sobic003G444300 Sobic002G303800 Sobic002G303800 Sobic004G208100--Sobic002G303800 Sobic004G208100--Sobic001G238900 Sobic002G133000 Sobic002G133000 Sobic004G208100--Sobic002G133000 Sobic004G208100--Sobic001G169800 Sobic001G122100 Sobic001G122100 Sobic004G208100--Sobic001G122100 Sobic001G235700 Sobic001G235700 Sobic004G208100--Sobic001G235700 Sobic004G208100--Sobic002G246900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.