Gene annotation
Transcriptome id Sobic.001G180800.1,Sobic.001G180800.2
Synonym Sb01g015730
Functional annotation secretory carrier-associated membrane protein, putative, expressed
UniProt A0A1Z5S6A3 , A0A1B6QJK9
Pfam PF04144
Panther DB PTHR10687 PTHR10687:SF20
NCBI CDD KOG3088; Secretory carrier membrane protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0015031protein transport


Orthologs (automatic annotation)
TAIR AT1G61250 : secretory carrier 3
RAP-DB (Rice) LOC_Os03g38600.1 : secretory carrier-associated membrane protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK14330
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G190200 Sec1 family transport protein, putative, expressed -
2 Sobic.005G123400 expressed protein -
3 Sobic.003G393200 expressed protein -
4 Sobic.010G112600 integral membrane protein, putative, expressed -
5 Sobic.001G052100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide domain containing protein, putative, expressed -
6 Sobic.009G252300 expressed protein -
7 Sobic.001G043200 expressed protein -
8 Sobic.009G194000 Alg9-like mannosyltransferase protein, putative, expressed K05286: GPI mannosyltransferase 3
9 Sobic.004G122900 gamma-secretase subunit APH-1B, putative, expressed -
10 Sobic.009G227100 expressed protein -
11 Sobic.003G021600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K13117: ATP-dependent RNA helicase DDX35
12 Sobic.010G255900 DNL zinc finger domain containing protein, putative, expressed K17808: ZIM17, DNLZ, mitochondrial protein import protein ZIM17
13 Sobic.004G106250 - -
14 Sobic.001G411900 TBC domain containing protein, expressed -
15 Sobic.004G097900 expressed protein -
16 Sobic.007G087900 Rf1, mitochondrial precursor, putative, expressed -
17 Sobic.003G181700 GPI mannosyltransferase 2, putative, expressed K07542: GPI mannosyltransferase 2
18 Sobic.003G368400 sterol 3-beta-glucosyltransferase, putative, expressed K05841: sterol 3beta-glucosyltransferase
19 Sobic.003G428000 expressed protein -
20 Sobic.001G141400 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -


Gene co-expression network
sample Sobic001G180800 Sobic001G180800 Sobic003G190200 Sobic003G190200 Sobic001G180800--Sobic003G190200 Sobic005G123400 Sobic005G123400 Sobic001G180800--Sobic005G123400 Sobic003G393200 Sobic003G393200 Sobic001G180800--Sobic003G393200 Sobic010G112600 Sobic010G112600 Sobic001G180800--Sobic010G112600 Sobic001G052100 Sobic001G052100 Sobic001G180800--Sobic001G052100 Sobic009G252300 Sobic009G252300 Sobic001G180800--Sobic009G252300 Sobic001G043200 Sobic001G043200 Sobic001G180800--Sobic001G043200 Sobic009G194000 Sobic009G194000 Sobic001G180800--Sobic009G194000 Sobic004G122900 Sobic004G122900 Sobic001G180800--Sobic004G122900 Sobic007G030100 Sobic007G030100 Sobic003G190200--Sobic007G030100 Sobic003G394500 Sobic003G394500 Sobic003G190200--Sobic003G394500 Sobic007G172700 Sobic007G172700 Sobic003G190200--Sobic007G172700 Sobic003G021600 Sobic003G021600 Sobic003G190200--Sobic003G021600 Sobic003G190200--Sobic009G252300 Sobic001G424800 Sobic001G424800 Sobic003G190200--Sobic001G424800 Sobic003G190200--Sobic003G393200 Sobic003G428000 Sobic003G428000 Sobic003G190200--Sobic003G428000 Sobic001G385000 Sobic001G385000 Sobic003G190200--Sobic001G385000 Sobic006G237500 Sobic006G237500 Sobic005G123400--Sobic006G237500 Sobic005G123400--Sobic010G112600 Sobic005G123400--Sobic003G393200 Sobic005G123400--Sobic001G043200 Sobic009G227100 Sobic009G227100 Sobic005G123400--Sobic009G227100 Sobic005G123400--Sobic009G252300 Sobic005G123400--Sobic007G030100 Sobic005G123400--Sobic003G190200 Sobic003G368400 Sobic003G368400 Sobic005G123400--Sobic003G368400 Sobic003G393200--Sobic003G190200 Sobic003G393200--Sobic005G123400 Sobic001G051400 Sobic001G051400 Sobic003G393200--Sobic001G051400 Sobic003G393200--Sobic006G237500 Sobic002G066800 Sobic002G066800 Sobic003G393200--Sobic002G066800 Sobic005G087300 Sobic005G087300 Sobic003G393200--Sobic005G087300 Sobic003G393200--Sobic001G043200 Sobic001G343000 Sobic001G343000 Sobic003G393200--Sobic001G343000 Sobic009G059400 Sobic009G059400 Sobic003G393200--Sobic009G059400 Sobic010G112600--Sobic005G123400 Sobic003G117800 Sobic003G117800 Sobic010G112600--Sobic003G117800 Sobic004G194400 Sobic004G194400 Sobic010G112600--Sobic004G194400 Sobic010G277700 Sobic010G277700 Sobic010G112600--Sobic010G277700 Sobic010G112600--Sobic003G190200 Sobic010G112600--Sobic009G252300 Sobic010G112600--Sobic003G394500 Sobic010G112600--Sobic006G237500 Sobic008G155400 Sobic008G155400 Sobic010G112600--Sobic008G155400 Sobic001G052100--Sobic005G123400 Sobic008G039000 Sobic008G039000 Sobic001G052100--Sobic008G039000 Sobic001G203600 Sobic001G203600 Sobic001G052100--Sobic001G203600 Sobic001G052100--Sobic010G112600 Sobic001G052100--Sobic006G237500 Sobic006G262800 Sobic006G262800 Sobic001G052100--Sobic006G262800 Sobic001G052100--Sobic009G227100 Sobic001G478900 Sobic001G478900 Sobic001G052100--Sobic001G478900 Sobic008G095900 Sobic008G095900 Sobic001G052100--Sobic008G095900 Sobic009G252300--Sobic003G428000 Sobic009G252300--Sobic003G190200 Sobic001G149000 Sobic001G149000 Sobic009G252300--Sobic001G149000 Sobic001G141400 Sobic001G141400 Sobic009G252300--Sobic001G141400 Sobic009G252300--Sobic005G123400 Sobic009G252300--Sobic003G117800 Sobic010G134650 Sobic010G134650 Sobic009G252300--Sobic010G134650 Sobic007G192400 Sobic007G192400 Sobic009G252300--Sobic007G192400 Sobic008G152700 Sobic008G152700 Sobic009G252300--Sobic008G152700 Sobic001G043200--Sobic005G123400 Sobic001G043200--Sobic003G190200 Sobic001G043200--Sobic003G021600 Sobic001G043200--Sobic003G394500 Sobic009G122500 Sobic009G122500 Sobic001G043200--Sobic009G122500 Sobic001G043200--Sobic007G030100 Sobic001G043200--Sobic004G122900 Sobic009G154900 Sobic009G154900 Sobic001G043200--Sobic009G154900 Sobic003G194800 Sobic003G194800 Sobic001G043200--Sobic003G194800 Sobic003G181700 Sobic003G181700 Sobic009G194000--Sobic003G181700 Sobic009G194000--Sobic003G021600 Sobic001G490900 Sobic001G490900 Sobic009G194000--Sobic001G490900 Sobic010G169900 Sobic010G169900 Sobic009G194000--Sobic010G169900 Sobic009G194000--Sobic004G122900 Sobic001G308400 Sobic001G308400 Sobic009G194000--Sobic001G308400 Sobic009G194000--Sobic003G190200 Sobic006G060000 Sobic006G060000 Sobic009G194000--Sobic006G060000 Sobic009G194000--Sobic001G141400 Sobic004G122900--Sobic003G181700 Sobic004G122900--Sobic009G122500 Sobic004G122900--Sobic009G194000 Sobic001G156900 Sobic001G156900 Sobic004G122900--Sobic001G156900 Sobic004G122900--Sobic001G043200 Sobic001G335000 Sobic001G335000 Sobic004G122900--Sobic001G335000 Sobic004G122900--Sobic001G308400 Sobic004G122900--Sobic003G021600 Sobic002G227500 Sobic002G227500 Sobic004G122900--Sobic002G227500
Octagon: transcription factors


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