Gene annotation
Transcriptome id Sobic.001G289200.2
Synonym
Functional annotation expressed protein
UniProt A0A1Z5S8C5
Pfam -
Panther DB PTHR33443
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G28690 : -
RAP-DB (Rice) LOC_Os10g42270.1 : expressed protein
MaizeGDB (Corn) Zm00025a051835
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G016800 protein binding protein, putative, expressed K11271: DSCC1, sister chromatid cohesion protein DCC1
2 Sobic.001G135200 OB-fold nucleic acid binding domain containing protein, putative, expressed K15365: RecQ-mediated genome instability protein 2
3 Sobic.001G192700 major facilitator superfamily domain-containing protein 5, putative, expressed -
4 Sobic.002G315400 expressed protein -
5 Sobic.001G521100 POLD2 - Putative DNA polymerase delta complex subunit, expressed K02328: DNA polymerase delta subunit 2
6 Sobic.002G246900 expressed protein -
7 Sobic.008G179600 expressed protein -
8 Sobic.009G209001 - -
9 Sobic.006G119300 ribonuclease H2 subunit B, putative, expressed K10744: ribonuclease H2 subunit B
10 Sobic.002G236700 TMV-MP30 binding protein 2C, putative, expressed -
11 Sobic.004G032900 wee1-like protein kinase, putative, expressed K06632: wee1-like protein kinase
12 Sobic.004G348700 transferase family protein, putative, expressed -
13 Sobic.003G134500 cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
14 Sobic.008G017700 ribosomal protein L24, putative, expressed K02895: RP-L24, MRPL24, large subunit ribosomal protein L24
15 Sobic.003G025100 PSF2 - Putative GINS complex subunit, expressed K10733: GINS2, GINS complex subunit 2
16 Sobic.003G297200 lipase, putative, expressed -
17 Sobic.004G117400 expressed protein -
18 Sobic.009G131200 expressed protein -
19 Sobic.006G271000 mis12 protein, expressed -
20 Sobic.005G210500 - K10901: BLM, RECQL3, bloom syndrome protein


Gene co-expression network
sample Sobic001G289200 Sobic001G289200 Sobic001G016800 Sobic001G016800 Sobic001G289200--Sobic001G016800 Sobic001G135200 Sobic001G135200 Sobic001G289200--Sobic001G135200 Sobic001G192700 Sobic001G192700 Sobic001G289200--Sobic001G192700 Sobic002G315400 Sobic002G315400 Sobic001G289200--Sobic002G315400 Sobic001G521100 Sobic001G521100 Sobic001G289200--Sobic001G521100 Sobic002G246900 Sobic002G246900 Sobic001G289200--Sobic002G246900 Sobic008G179600 Sobic008G179600 Sobic001G289200--Sobic008G179600 Sobic009G209001 Sobic009G209001 Sobic001G289200--Sobic009G209001 Sobic006G119300 Sobic006G119300 Sobic001G289200--Sobic006G119300 Sobic002G297500 Sobic002G297500 Sobic001G016800--Sobic002G297500 Sobic001G016800--Sobic006G119300 Sobic010G051100 Sobic010G051100 Sobic001G016800--Sobic010G051100 Sobic002G113400 Sobic002G113400 Sobic001G016800--Sobic002G113400 Sobic009G181500 Sobic009G181500 Sobic001G016800--Sobic009G181500 Sobic003G444200 Sobic003G444200 Sobic001G016800--Sobic003G444200 Sobic001G082800 Sobic001G082800 Sobic001G016800--Sobic001G082800 Sobic004G053900 Sobic004G053900 Sobic001G016800--Sobic004G053900 Sobic004G032900 Sobic004G032900 Sobic001G016800--Sobic004G032900 Sobic003G044700 Sobic003G044700 Sobic001G135200--Sobic003G044700 Sobic001G135200--Sobic001G192700 Sobic003G016300 Sobic003G016300 Sobic001G135200--Sobic003G016300 Sobic004G261800 Sobic004G261800 Sobic001G135200--Sobic004G261800 Sobic002G352200 Sobic002G352200 Sobic001G135200--Sobic002G352200 Sobic004G100100 Sobic004G100100 Sobic001G135200--Sobic004G100100 Sobic009G244900 Sobic009G244900 Sobic001G135200--Sobic009G244900 Sobic005G185200 Sobic005G185200 Sobic001G135200--Sobic005G185200 Sobic006G271000 Sobic006G271000 Sobic001G135200--Sobic006G271000 Sobic001G219800 Sobic001G219800 Sobic001G192700--Sobic001G219800 Sobic001G192700--Sobic003G016300 Sobic001G352800 Sobic001G352800 Sobic001G192700--Sobic001G352800 Sobic002G232400 Sobic002G232400 Sobic001G192700--Sobic002G232400 Sobic001G192700--Sobic001G135200 Sobic001G348000 Sobic001G348000 Sobic001G192700--Sobic001G348000 Sobic004G117400 Sobic004G117400 Sobic001G192700--Sobic004G117400 Sobic001G091701 Sobic001G091701 Sobic001G192700--Sobic001G091701 Sobic002G387800 Sobic002G387800 Sobic001G192700--Sobic002G387800 Sobic002G315400--Sobic001G521100 Sobic002G092200 Sobic002G092200 Sobic002G315400--Sobic002G092200 Sobic002G351100 Sobic002G351100 Sobic002G315400--Sobic002G351100 Sobic002G236700 Sobic002G236700 Sobic002G315400--Sobic002G236700 Sobic009G109300 Sobic009G109300 Sobic002G315400--Sobic009G109300 Sobic003G412800 Sobic003G412800 Sobic002G315400--Sobic003G412800 Sobic003G297200 Sobic003G297200 Sobic002G315400--Sobic003G297200 Sobic002G315400--Sobic002G246900 Sobic007G112100 Sobic007G112100 Sobic002G315400--Sobic007G112100 Sobic001G521100--Sobic002G113400 Sobic001G521100--Sobic002G246900 Sobic001G521100--Sobic002G351100 Sobic001G521100--Sobic002G315400 Sobic001G025900 Sobic001G025900 Sobic001G521100--Sobic001G025900 Sobic001G521100--Sobic006G119300 Sobic006G236800 Sobic006G236800 Sobic001G521100--Sobic006G236800 Sobic003G442300 Sobic003G442300 Sobic001G521100--Sobic003G442300 Sobic001G521100--Sobic003G297200 Sobic004G047100 Sobic004G047100 Sobic002G246900--Sobic004G047100 Sobic010G105400 Sobic010G105400 Sobic002G246900--Sobic010G105400 Sobic010G191000 Sobic010G191000 Sobic002G246900--Sobic010G191000 Sobic003G107200 Sobic003G107200 Sobic002G246900--Sobic003G107200 Sobic001G238900 Sobic001G238900 Sobic002G246900--Sobic001G238900 Sobic002G246900--Sobic009G181500 Sobic002G246900--Sobic002G236700 Sobic001G169800 Sobic001G169800 Sobic002G246900--Sobic001G169800 Sobic002G230800 Sobic002G230800 Sobic002G246900--Sobic002G230800 Sobic002G090300 Sobic002G090300 Sobic008G179600--Sobic002G090300 Sobic008G006300 Sobic008G006300 Sobic008G179600--Sobic008G006300 Sobic004G056400 Sobic004G056400 Sobic008G179600--Sobic004G056400 Sobic008G179600--Sobic003G016300 Sobic009G111400 Sobic009G111400 Sobic008G179600--Sobic009G111400 Sobic010G101600 Sobic010G101600 Sobic008G179600--Sobic010G101600 Sobic003G096000 Sobic003G096000 Sobic008G179600--Sobic003G096000 Sobic008G062300 Sobic008G062300 Sobic008G179600--Sobic008G062300 Sobic008G025600 Sobic008G025600 Sobic008G179600--Sobic008G025600 Sobic007G184001 Sobic007G184001 Sobic009G209001--Sobic007G184001 Sobic002G246800 Sobic002G246800 Sobic009G209001--Sobic002G246800 Sobic001G031800 Sobic001G031800 Sobic009G209001--Sobic001G031800 Sobic009G209001--Sobic001G135200 Sobic001G134200 Sobic001G134200 Sobic009G209001--Sobic001G134200 Sobic009G209001--Sobic003G044700 Sobic001G084166 Sobic001G084166 Sobic009G209001--Sobic001G084166 Sobic003G289601 Sobic003G289601 Sobic009G209001--Sobic003G289601 Sobic004G183200 Sobic004G183200 Sobic009G209001--Sobic004G183200 Sobic006G119300--Sobic002G113400 Sobic001G486600 Sobic001G486600 Sobic006G119300--Sobic001G486600 Sobic006G119300--Sobic002G297500 Sobic007G125300 Sobic007G125300 Sobic006G119300--Sobic007G125300 Sobic010G252200 Sobic010G252200 Sobic006G119300--Sobic010G252200 Sobic006G119300--Sobic001G521100 Sobic006G119300--Sobic004G032900 Sobic005G210500 Sobic005G210500 Sobic006G119300--Sobic005G210500 Sobic006G119300--Sobic004G053900
Octagon: transcription factors


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