Gene annotation
Transcriptome id Sobic.009G209001.1
Synonym -
Functional annotation -
UniProt C5Z1F8
Pfam -
Panther DB PTHR33982 PTHR33982:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G19151 : -
RAP-DB (Rice) LOC_Os05g45610.1 : expressed protein
MaizeGDB (Corn) Zm00025a038018
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G184001 - K06688: UBE2C, ubiquitin-conjugating enzyme E2 C
2 Sobic.002G246800 acetyltransferase, GNAT family, putative, expressed K00621: GNPNAT1, glucosamine-phosphate N-acetyltransferase
3 Sobic.001G031800 ribosomal protein L30 containing protein, expressed K02907: RP-L30, MRPL30, large subunit ribosomal protein L30
4 Sobic.001G135200 OB-fold nucleic acid binding domain containing protein, putative, expressed K15365: RecQ-mediated genome instability protein 2
5 Sobic.001G134200 expressed protein -
6 Sobic.003G044700 zinc finger family protein, putative, expressed -
7 Sobic.001G084166 - -
8 Sobic.003G289601 - -
9 Sobic.004G183200 expressed protein -
10 Sobic.003G296800 expressed protein -
11 Sobic.008G016700 expressed protein -
12 Sobic.003G335300 E2F-related protein, putative, expressed -
13 Sobic.002G329900 core histone H2A/H2B/H3/H4, putative, expressed K11251: histone H2A
14 Sobic.004G100100 expressed protein -
15 Sobic.008G018300 expressed protein K17402: small subunit ribosomal protein S23
16 Sobic.010G231700 expressed protein -
17 Sobic.008G040400 DUF584 domain containing protein, putative, expressed -
18 Sobic.007G212100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AGC_PVPK_like_CDK8.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
19 Sobic.004G232500 dnaJ homolog subfamily C member 7, putative, expressed K09527: DnaJ homolog subfamily C member 7
20 Sobic.006G118400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@gibberellin 20 oxidase 2, putative, expressed -


Gene co-expression network
sample Sobic009G209001 Sobic009G209001 Sobic007G184001 Sobic007G184001 Sobic009G209001--Sobic007G184001 Sobic002G246800 Sobic002G246800 Sobic009G209001--Sobic002G246800 Sobic001G031800 Sobic001G031800 Sobic009G209001--Sobic001G031800 Sobic001G135200 Sobic001G135200 Sobic009G209001--Sobic001G135200 Sobic001G134200 Sobic001G134200 Sobic009G209001--Sobic001G134200 Sobic003G044700 Sobic003G044700 Sobic009G209001--Sobic003G044700 Sobic001G084166 Sobic001G084166 Sobic009G209001--Sobic001G084166 Sobic003G289601 Sobic003G289601 Sobic009G209001--Sobic003G289601 Sobic004G183200 Sobic004G183200 Sobic009G209001--Sobic004G183200 Sobic007G184001--Sobic003G289601 Sobic007G184001--Sobic001G031800 Sobic002G329900 Sobic002G329900 Sobic007G184001--Sobic002G329900 Sobic007G184001--Sobic009G209001 Sobic001G047800 Sobic001G047800 Sobic007G184001--Sobic001G047800 Sobic002G263100 Sobic002G263100 Sobic007G184001--Sobic002G263100 Sobic004G260200 Sobic004G260200 Sobic007G184001--Sobic004G260200 Sobic002G309700 Sobic002G309700 Sobic007G184001--Sobic002G309700 Sobic003G296800 Sobic003G296800 Sobic007G184001--Sobic003G296800 Sobic002G246800--Sobic001G031800 Sobic003G335300 Sobic003G335300 Sobic002G246800--Sobic003G335300 Sobic001G181500 Sobic001G181500 Sobic002G246800--Sobic001G181500 Sobic002G246800--Sobic009G209001 Sobic010G231700 Sobic010G231700 Sobic002G246800--Sobic010G231700 Sobic007G141100 Sobic007G141100 Sobic002G246800--Sobic007G141100 Sobic010G031000 Sobic010G031000 Sobic002G246800--Sobic010G031000 Sobic009G215300 Sobic009G215300 Sobic002G246800--Sobic009G215300 Sobic006G124300 Sobic006G124300 Sobic002G246800--Sobic006G124300 Sobic001G031800--Sobic001G134200 Sobic001G031800--Sobic002G263100 Sobic001G031800--Sobic003G296800 Sobic001G031800--Sobic004G260200 Sobic007G013900 Sobic007G013900 Sobic001G031800--Sobic007G013900 Sobic001G031800--Sobic002G309700 Sobic001G031800--Sobic002G246800 Sobic008G136800 Sobic008G136800 Sobic001G031800--Sobic008G136800 Sobic001G031800--Sobic007G184001 Sobic001G135200--Sobic003G044700 Sobic001G192700 Sobic001G192700 Sobic001G135200--Sobic001G192700 Sobic003G016300 Sobic003G016300 Sobic001G135200--Sobic003G016300 Sobic004G261800 Sobic004G261800 Sobic001G135200--Sobic004G261800 Sobic002G352200 Sobic002G352200 Sobic001G135200--Sobic002G352200 Sobic004G100100 Sobic004G100100 Sobic001G135200--Sobic004G100100 Sobic009G244900 Sobic009G244900 Sobic001G135200--Sobic009G244900 Sobic005G185200 Sobic005G185200 Sobic001G135200--Sobic005G185200 Sobic006G271000 Sobic006G271000 Sobic001G135200--Sobic006G271000 Sobic001G134200--Sobic001G031800 Sobic001G134200--Sobic007G013900 Sobic002G260200 Sobic002G260200 Sobic001G134200--Sobic002G260200 Sobic001G134200--Sobic004G183200 Sobic001G148700 Sobic001G148700 Sobic001G134200--Sobic001G148700 Sobic001G134200--Sobic003G296800 Sobic001G134200--Sobic002G263100 Sobic001G134200--Sobic002G309700 Sobic004G159000 Sobic004G159000 Sobic001G134200--Sobic004G159000 Sobic003G044700--Sobic001G135200 Sobic003G044700--Sobic005G185200 Sobic003G074900 Sobic003G074900 Sobic003G044700--Sobic003G074900 Sobic006G118400 Sobic006G118400 Sobic003G044700--Sobic006G118400 Sobic003G044700--Sobic002G246800 Sobic003G044700--Sobic003G335300 Sobic003G044700--Sobic003G016300 Sobic003G044700--Sobic001G192700 Sobic010G216400 Sobic010G216400 Sobic003G044700--Sobic010G216400 Sobic001G084166--Sobic009G209001 Sobic001G365700 Sobic001G365700 Sobic001G084166--Sobic001G365700 Sobic007G212100 Sobic007G212100 Sobic001G084166--Sobic007G212100 Sobic002G225900 Sobic002G225900 Sobic001G084166--Sobic002G225900 Sobic004G127000 Sobic004G127000 Sobic001G084166--Sobic004G127000 Sobic004G232500 Sobic004G232500 Sobic001G084166--Sobic004G232500 Sobic001G084166--Sobic001G135200 Sobic008G040400 Sobic008G040400 Sobic001G084166--Sobic008G040400 Sobic003G013700 Sobic003G013700 Sobic001G084166--Sobic003G013700 Sobic006G261900 Sobic006G261900 Sobic003G289601--Sobic006G261900 Sobic003G289601--Sobic007G184001 Sobic003G289601--Sobic001G047800 Sobic006G262300 Sobic006G262300 Sobic003G289601--Sobic006G262300 Sobic003G289601--Sobic003G296800 Sobic009G173500 Sobic009G173500 Sobic003G289601--Sobic009G173500 Sobic003G289601--Sobic002G329900 Sobic009G223300 Sobic009G223300 Sobic003G289601--Sobic009G223300 Sobic003G289601--Sobic002G309700 Sobic004G183200--Sobic003G296800 Sobic001G519000 Sobic001G519000 Sobic004G183200--Sobic001G519000 Sobic010G059300 Sobic010G059300 Sobic004G183200--Sobic010G059300 Sobic007G211500 Sobic007G211500 Sobic004G183200--Sobic007G211500 Sobic004G183200--Sobic002G263100 Sobic004G183200--Sobic001G047800 Sobic007G161700 Sobic007G161700 Sobic004G183200--Sobic007G161700 Sobic001G286200 Sobic001G286200 Sobic004G183200--Sobic001G286200 Sobic004G060500 Sobic004G060500 Sobic004G183200--Sobic004G060500
Octagon: transcription factors


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