Gene annotation
Transcriptome id Sobic.008G040400.1
Synonym Sb08g003490
Functional annotation DUF584 domain containing protein, putative, expressed
UniProt C5YS46
Pfam PF04520
Panther DB PTHR33083 PTHR33083:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G15040 : Protein of unknown function, DUF584
RAP-DB (Rice) LOC_Os12g05980.1 : DUF584 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a056629 , Zm00025a053920 , Zm00025a017604
Brachypodium KQK24026 , KQJ97135 , PNT65423 , PNT65422
Barley HORVU1Hr1G041890.1 , HORVU0Hr1G038250.5 , HORVU0Hr1G038250.8 , HORVU0Hr1G038250.1 , HORVU0Hr1G038250.2 , HORVU0Hr1G038250.3 , HORVU0Hr1G038250.4 , HORVU0Hr1G038250.6 , HORVU0Hr1G038250.7
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G188400 GNS1/SUR4 membrane family protein, putative, expressed -
2 Sobic.007G212100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AGC_PVPK_like_CDK8.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
3 Sobic.004G232500 dnaJ homolog subfamily C member 7, putative, expressed K09527: DnaJ homolog subfamily C member 7
4 Sobic.004G173700 SLL1 protein, putative, expressed -
5 Sobic.005G108700 - -
6 Sobic.003G202400 expressed protein -
7 Sobic.003G137600 CHIT10 - Chitinase family protein precursor, expressed -
8 Sobic.003G284100 expressed protein -
9 Sobic.001G365700 OsRhmbd13 - Putative Rhomboid homologue, expressed -
10 Sobic.009G209001 - -
11 Sobic.003G335300 E2F-related protein, putative, expressed -
12 Sobic.001G536100 lysM domain containing protein, putative, expressed -
13 Sobic.004G116400 OsFBK5 - F-box domain and kelch repeat containing protein, expressed -
14 Sobic.009G176400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
15 Sobic.003G013700 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E
16 Sobic.009G189700 - -
17 Sobic.007G014700 Fructokinase-2 (Zm)(PubMedID : 27208977)@kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase
18 Sobic.004G247700 expressed protein -
19 Sobic.002G345000 expressed protein -
20 Sobic.001G154600 expressed protein -


Gene co-expression network
sample Sobic008G040400 Sobic008G040400 Sobic008G188400 Sobic008G188400 Sobic008G040400--Sobic008G188400 Sobic007G212100 Sobic007G212100 Sobic008G040400--Sobic007G212100 Sobic004G232500 Sobic004G232500 Sobic008G040400--Sobic004G232500 Sobic004G173700 Sobic004G173700 Sobic008G040400--Sobic004G173700 Sobic005G108700 Sobic005G108700 Sobic008G040400--Sobic005G108700 Sobic003G202400 Sobic003G202400 Sobic008G040400--Sobic003G202400 Sobic003G137600 Sobic003G137600 Sobic008G040400--Sobic003G137600 Sobic003G284100 Sobic003G284100 Sobic008G040400--Sobic003G284100 Sobic001G365700 Sobic001G365700 Sobic008G040400--Sobic001G365700 Sobic004G247700 Sobic004G247700 Sobic008G188400--Sobic004G247700 Sobic001G482800 Sobic001G482800 Sobic008G188400--Sobic001G482800 Sobic008G188400--Sobic004G232500 Sobic008G188400--Sobic001G365700 Sobic003G335300 Sobic003G335300 Sobic008G188400--Sobic003G335300 Sobic007G219500 Sobic007G219500 Sobic008G188400--Sobic007G219500 Sobic008G188400--Sobic004G173700 Sobic008G188400--Sobic003G284100 Sobic008G188400--Sobic008G040400 Sobic009G176400 Sobic009G176400 Sobic007G212100--Sobic009G176400 Sobic007G212100--Sobic004G173700 Sobic007G212100--Sobic003G137600 Sobic007G212100--Sobic004G232500 Sobic010G250300 Sobic010G250300 Sobic007G212100--Sobic010G250300 Sobic004G232700 Sobic004G232700 Sobic007G212100--Sobic004G232700 Sobic003G139200 Sobic003G139200 Sobic007G212100--Sobic003G139200 Sobic004G247500 Sobic004G247500 Sobic007G212100--Sobic004G247500 Sobic004G165200 Sobic004G165200 Sobic007G212100--Sobic004G165200 Sobic004G232500--Sobic003G335300 Sobic003G273000 Sobic003G273000 Sobic004G232500--Sobic003G273000 Sobic004G232500--Sobic001G482800 Sobic004G232500--Sobic007G212100 Sobic004G232500--Sobic008G188400 Sobic010G216400 Sobic010G216400 Sobic004G232500--Sobic010G216400 Sobic004G232500--Sobic001G365700 Sobic006G118400 Sobic006G118400 Sobic004G232500--Sobic006G118400 Sobic004G159400 Sobic004G159400 Sobic004G232500--Sobic004G159400 Sobic004G173700--Sobic003G137600 Sobic006G120900 Sobic006G120900 Sobic004G173700--Sobic006G120900 Sobic002G420600 Sobic002G420600 Sobic004G173700--Sobic002G420600 Sobic001G387200 Sobic001G387200 Sobic004G173700--Sobic001G387200 Sobic004G173700--Sobic001G365700 Sobic003G129900 Sobic003G129900 Sobic004G173700--Sobic003G129900 Sobic004G173700--Sobic007G212100 Sobic001G303900 Sobic001G303900 Sobic004G173700--Sobic001G303900 Sobic008G018300 Sobic008G018300 Sobic004G173700--Sobic008G018300 Sobic005G108700--Sobic003G137600 Sobic003G212000 Sobic003G212000 Sobic005G108700--Sobic003G212000 Sobic009G189700 Sobic009G189700 Sobic005G108700--Sobic009G189700 Sobic005G108700--Sobic008G188400 Sobic001G265100 Sobic001G265100 Sobic005G108700--Sobic001G265100 Sobic004G128700 Sobic004G128700 Sobic005G108700--Sobic004G128700 Sobic005G108700--Sobic003G284100 Sobic003G005100 Sobic003G005100 Sobic005G108700--Sobic003G005100 Sobic005G108700--Sobic003G139200 Sobic003G089100 Sobic003G089100 Sobic003G202400--Sobic003G089100 Sobic003G202400--Sobic003G212000 Sobic003G202400--Sobic002G420600 Sobic003G202400--Sobic003G137600 Sobic003G234500 Sobic003G234500 Sobic003G202400--Sobic003G234500 Sobic002G345000 Sobic002G345000 Sobic003G202400--Sobic002G345000 Sobic003G202400--Sobic003G284100 Sobic003G013700 Sobic003G013700 Sobic003G202400--Sobic003G013700 Sobic007G014700 Sobic007G014700 Sobic003G202400--Sobic007G014700 Sobic003G137600--Sobic004G173700 Sobic003G137600--Sobic003G212000 Sobic003G137600--Sobic003G234500 Sobic003G137600--Sobic006G120900 Sobic002G113200 Sobic002G113200 Sobic003G137600--Sobic002G113200 Sobic003G137600--Sobic001G365700 Sobic003G137600--Sobic007G212100 Sobic003G137600--Sobic003G284100 Sobic003G137600--Sobic009G189700 Sobic003G284100--Sobic003G212000 Sobic003G284100--Sobic002G113200 Sobic003G284100--Sobic003G013700 Sobic003G284100--Sobic003G089100 Sobic006G070564 Sobic006G070564 Sobic003G284100--Sobic006G070564 Sobic004G279200 Sobic004G279200 Sobic003G284100--Sobic004G279200 Sobic003G284100--Sobic004G247500 Sobic009G157800 Sobic009G157800 Sobic003G284100--Sobic009G157800 Sobic003G284100--Sobic003G137600 Sobic001G365700--Sobic003G335300 Sobic001G365700--Sobic004G173700 Sobic004G127000 Sobic004G127000 Sobic001G365700--Sobic004G127000 Sobic001G365700--Sobic003G137600 Sobic001G365700--Sobic001G482800 Sobic001G365700--Sobic010G216400 Sobic001G365700--Sobic003G284100 Sobic001G365700--Sobic004G232500 Sobic010G043250 Sobic010G043250 Sobic001G365700--Sobic010G043250
Octagon: transcription factors


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