Gene annotation
Transcriptome id Sobic.005G108700.1
Synonym
Functional annotation -
UniProt A0A1B6PRL3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G137600 CHIT10 - Chitinase family protein precursor, expressed -
2 Sobic.003G212000 OsCML12 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
3 Sobic.009G189700 - -
4 Sobic.008G188400 GNS1/SUR4 membrane family protein, putative, expressed -
5 Sobic.001G265100 - -
6 Sobic.004G128700 AGC_PVPK_like_kin82y.5 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
7 Sobic.003G284100 expressed protein -
8 Sobic.003G005100 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
9 Sobic.003G139200 - -
10 Sobic.002G034750 - -
11 Sobic.005G042900 expressed protein -
12 Sobic.003G202400 expressed protein -
13 Sobic.010G161000 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.26 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
14 Sobic.004G247700 expressed protein -
15 Sobic.001G482800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
16 Sobic.003G234500 CA(PubMedID : 19549309)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
17 Sobic.008G040400 DUF584 domain containing protein, putative, expressed -
18 Sobic.002G345000 expressed protein -
19 Sobic.002G113200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.004G247500 "HD-zip transcription factor, ortholog of sihdz02 of foxtail millet (Setaria italica L.)"(PubMedID : 29862293)@caleosin related protein, putative, expressed K17991: peroxygenase


Gene co-expression network
sample Sobic005G108700 Sobic005G108700 Sobic003G137600 Sobic003G137600 Sobic005G108700--Sobic003G137600 Sobic003G212000 Sobic003G212000 Sobic005G108700--Sobic003G212000 Sobic009G189700 Sobic009G189700 Sobic005G108700--Sobic009G189700 Sobic008G188400 Sobic008G188400 Sobic005G108700--Sobic008G188400 Sobic001G265100 Sobic001G265100 Sobic005G108700--Sobic001G265100 Sobic004G128700 Sobic004G128700 Sobic005G108700--Sobic004G128700 Sobic003G284100 Sobic003G284100 Sobic005G108700--Sobic003G284100 Sobic003G005100 Sobic003G005100 Sobic005G108700--Sobic003G005100 Sobic003G139200 Sobic003G139200 Sobic005G108700--Sobic003G139200 Sobic004G173700 Sobic004G173700 Sobic003G137600--Sobic004G173700 Sobic003G137600--Sobic003G212000 Sobic003G234500 Sobic003G234500 Sobic003G137600--Sobic003G234500 Sobic006G120900 Sobic006G120900 Sobic003G137600--Sobic006G120900 Sobic002G113200 Sobic002G113200 Sobic003G137600--Sobic002G113200 Sobic001G365700 Sobic001G365700 Sobic003G137600--Sobic001G365700 Sobic007G212100 Sobic007G212100 Sobic003G137600--Sobic007G212100 Sobic003G137600--Sobic003G284100 Sobic003G137600--Sobic009G189700 Sobic003G212000--Sobic003G234500 Sobic008G071300 Sobic008G071300 Sobic003G212000--Sobic008G071300 Sobic003G212000--Sobic002G113200 Sobic006G267100 Sobic006G267100 Sobic003G212000--Sobic006G267100 Sobic003G212000--Sobic009G189700 Sobic005G144000 Sobic005G144000 Sobic003G212000--Sobic005G144000 Sobic001G503600 Sobic001G503600 Sobic003G212000--Sobic001G503600 Sobic002G389600 Sobic002G389600 Sobic003G212000--Sobic002G389600 Sobic002G170100 Sobic002G170100 Sobic003G212000--Sobic002G170100 Sobic009G189700--Sobic005G144000 Sobic009G189700--Sobic002G170100 Sobic009G189700--Sobic001G503600 Sobic009G189700--Sobic008G071300 Sobic006G272400 Sobic006G272400 Sobic009G189700--Sobic006G272400 Sobic001G039100 Sobic001G039100 Sobic009G189700--Sobic001G039100 Sobic009G242200 Sobic009G242200 Sobic009G189700--Sobic009G242200 Sobic003G441000 Sobic003G441000 Sobic009G189700--Sobic003G441000 Sobic005G042900 Sobic005G042900 Sobic009G189700--Sobic005G042900 Sobic004G247700 Sobic004G247700 Sobic008G188400--Sobic004G247700 Sobic001G482800 Sobic001G482800 Sobic008G188400--Sobic001G482800 Sobic004G232500 Sobic004G232500 Sobic008G188400--Sobic004G232500 Sobic008G188400--Sobic001G365700 Sobic003G335300 Sobic003G335300 Sobic008G188400--Sobic003G335300 Sobic007G219500 Sobic007G219500 Sobic008G188400--Sobic007G219500 Sobic008G188400--Sobic004G173700 Sobic008G188400--Sobic003G284100 Sobic008G040400 Sobic008G040400 Sobic008G188400--Sobic008G040400 Sobic001G265100--Sobic009G189700 Sobic005G049200 Sobic005G049200 Sobic001G265100--Sobic005G049200 Sobic001G265100--Sobic006G272400 Sobic005G054150 Sobic005G054150 Sobic001G265100--Sobic005G054150 Sobic001G265100--Sobic005G042900 Sobic006G168200 Sobic006G168200 Sobic001G265100--Sobic006G168200 Sobic001G265100--Sobic004G128700 Sobic005G018600 Sobic005G018600 Sobic001G265100--Sobic005G018600 Sobic001G265100--Sobic005G144000 Sobic004G128700--Sobic005G049200 Sobic004G128700--Sobic006G272400 Sobic004G128700--Sobic009G189700 Sobic001G045400 Sobic001G045400 Sobic004G128700--Sobic001G045400 Sobic004G168150 Sobic004G168150 Sobic004G128700--Sobic004G168150 Sobic004G128700--Sobic005G042900 Sobic004G123100 Sobic004G123100 Sobic004G128700--Sobic004G123100 Sobic004G128700--Sobic005G144000 Sobic002G405300 Sobic002G405300 Sobic004G128700--Sobic002G405300 Sobic003G284100--Sobic003G212000 Sobic003G284100--Sobic002G113200 Sobic003G013700 Sobic003G013700 Sobic003G284100--Sobic003G013700 Sobic003G089100 Sobic003G089100 Sobic003G284100--Sobic003G089100 Sobic006G070564 Sobic006G070564 Sobic003G284100--Sobic006G070564 Sobic004G279200 Sobic004G279200 Sobic003G284100--Sobic004G279200 Sobic004G247500 Sobic004G247500 Sobic003G284100--Sobic004G247500 Sobic009G157800 Sobic009G157800 Sobic003G284100--Sobic009G157800 Sobic003G284100--Sobic003G137600 Sobic003G005100--Sobic002G113200 Sobic003G005100--Sobic003G212000 Sobic006G252400 Sobic006G252400 Sobic003G005100--Sobic006G252400 Sobic003G005100--Sobic003G284100 Sobic010G161000 Sobic010G161000 Sobic003G005100--Sobic010G161000 Sobic003G005100--Sobic003G234500 Sobic003G353700 Sobic003G353700 Sobic003G005100--Sobic003G353700 Sobic003G005100--Sobic007G219500 Sobic004G259300 Sobic004G259300 Sobic003G005100--Sobic004G259300 Sobic003G139200--Sobic004G173700 Sobic003G139200--Sobic003G137600 Sobic003G139200--Sobic006G120900 Sobic003G139200--Sobic007G212100 Sobic003G139200--Sobic002G113200 Sobic003G139200--Sobic004G247500 Sobic001G303900 Sobic001G303900 Sobic003G139200--Sobic001G303900 Sobic003G139200--Sobic003G212000 Sobic003G139200--Sobic009G189700
Octagon: transcription factors


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