Gene annotation
Transcriptome id Sobic.001G292400.2
Synonym Sb01g028570
Functional annotation expressed protein
UniProt C5WRE7
Pfam -
Panther DB PTHR35486
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G44600 : -
RAP-DB (Rice) LOC_Os04g49850.1 : expressed protein
MaizeGDB (Corn) Zm00025a003436 , Zm00025a051861
Brachypodium KQJ84272
Barley HORVU1Hr1G054570.1
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G187800 RING-H2 finger protein ATL1O, putative, expressed -
2 Sobic.004G138400 WRKY51, expressed -
3 Sobic.007G077300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
4 Sobic.003G325100 NB-ARC domain containing protein, expressed -
5 Sobic.005G165900 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.004G268900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.001G476100 expressed protein -
8 Sobic.009G214300 expressed protein -
9 Sobic.004G297600 triacylglycerol lipase like protein, putative, expressed -
10 Sobic.001G406300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
11 Sobic.003G242800 down-regulated TF in developmental senescence(PubMedID : 27586543)@WRKY15, expressed -
12 Sobic.010G221032 - -
13 Sobic.002G185200 VQ domain containing protein, putative, expressed -
14 Sobic.001G330925 - -
15 Sobic.009G162000 glycerol-3-phosphate acyltransferase 8, putative, expressed K13508: glycerol-3-phosphate acyltransferase
16 Sobic.003G401500 expressed protein -
17 Sobic.006G257700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heavy metal transport/detoxification protein, putative, expressed -
18 Sobic.003G365500 no apical meristem protein, putative, expressed -
19 Sobic.008G107000 expressed protein -
20 Sobic.002G174300 senescence-related tran- scription factor gene(PubMedID : 26317421)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY74, expressed -


Gene co-expression network
sample Sobic001G292400 Sobic001G292400 Sobic004G187800 Sobic004G187800 Sobic001G292400--Sobic004G187800 Sobic004G138400 Sobic004G138400 Sobic001G292400--Sobic004G138400 Sobic007G077300 Sobic007G077300 Sobic001G292400--Sobic007G077300 Sobic003G325100 Sobic003G325100 Sobic001G292400--Sobic003G325100 Sobic005G165900 Sobic005G165900 Sobic001G292400--Sobic005G165900 Sobic004G268900 Sobic004G268900 Sobic001G292400--Sobic004G268900 Sobic001G476100 Sobic001G476100 Sobic001G292400--Sobic001G476100 Sobic009G214300 Sobic009G214300 Sobic001G292400--Sobic009G214300 Sobic004G297600 Sobic004G297600 Sobic001G292400--Sobic004G297600 Sobic002G294600 Sobic002G294600 Sobic004G187800--Sobic002G294600 Sobic002G185200 Sobic002G185200 Sobic004G187800--Sobic002G185200 Sobic009G010400 Sobic009G010400 Sobic004G187800--Sobic009G010400 Sobic004G065900 Sobic004G065900 Sobic004G187800--Sobic004G065900 Sobic002G418900 Sobic002G418900 Sobic004G187800--Sobic002G418900 Sobic004G006500 Sobic004G006500 Sobic004G187800--Sobic004G006500 Sobic001G406300 Sobic001G406300 Sobic004G187800--Sobic001G406300 Sobic004G187800--Sobic004G297600 Sobic002G207300 Sobic002G207300 Sobic004G187800--Sobic002G207300 Sobic004G138400--Sobic003G325100 Sobic009G111800 Sobic009G111800 Sobic004G138400--Sobic009G111800 Sobic001G330925 Sobic001G330925 Sobic004G138400--Sobic001G330925 Sobic002G202800 Sobic002G202800 Sobic004G138400--Sobic002G202800 Sobic004G106200 Sobic004G106200 Sobic004G138400--Sobic004G106200 Sobic004G109100 Sobic004G109100 Sobic004G138400--Sobic004G109100 Sobic003G242800 Sobic003G242800 Sobic004G138400--Sobic003G242800 Sobic001G321700 Sobic001G321700 Sobic004G138400--Sobic001G321700 Sobic004G138400--Sobic001G476100 Sobic001G482600 Sobic001G482600 Sobic007G077300--Sobic001G482600 Sobic006G257700 Sobic006G257700 Sobic007G077300--Sobic006G257700 Sobic001G064900 Sobic001G064900 Sobic007G077300--Sobic001G064900 Sobic007G077300--Sobic001G406300 Sobic007G077300--Sobic004G297600 Sobic010G163150 Sobic010G163150 Sobic007G077300--Sobic010G163150 Sobic006G273800 Sobic006G273800 Sobic007G077300--Sobic006G273800 Sobic001G095700 Sobic001G095700 Sobic007G077300--Sobic001G095700 Sobic010G102000 Sobic010G102000 Sobic007G077300--Sobic010G102000 Sobic003G325100--Sobic004G138400 Sobic003G325100--Sobic002G202800 Sobic010G004500 Sobic010G004500 Sobic003G325100--Sobic010G004500 Sobic002G064200 Sobic002G064200 Sobic003G325100--Sobic002G064200 Sobic008G095100 Sobic008G095100 Sobic003G325100--Sobic008G095100 Sobic003G325100--Sobic009G111800 Sobic003G325100--Sobic003G242800 Sobic003G325100--Sobic004G106200 Sobic001G059300 Sobic001G059300 Sobic003G325100--Sobic001G059300 Sobic002G174300 Sobic002G174300 Sobic005G165900--Sobic002G174300 Sobic003G258700 Sobic003G258700 Sobic005G165900--Sobic003G258700 Sobic002G386200 Sobic002G386200 Sobic005G165900--Sobic002G386200 Sobic004G160300 Sobic004G160300 Sobic005G165900--Sobic004G160300 Sobic001G071300 Sobic001G071300 Sobic005G165900--Sobic001G071300 Sobic004G169900 Sobic004G169900 Sobic005G165900--Sobic004G169900 Sobic004G181200 Sobic004G181200 Sobic005G165900--Sobic004G181200 Sobic005G165900--Sobic009G214300 Sobic004G220600 Sobic004G220600 Sobic005G165900--Sobic004G220600 Sobic004G323600 Sobic004G323600 Sobic004G268900--Sobic004G323600 Sobic004G268900--Sobic004G065900 Sobic004G268900--Sobic004G187800 Sobic004G268900--Sobic002G207300 Sobic004G268900--Sobic002G294600 Sobic004G086800 Sobic004G086800 Sobic004G268900--Sobic004G086800 Sobic001G287600 Sobic001G287600 Sobic004G268900--Sobic001G287600 Sobic004G268900--Sobic002G185200 Sobic002G080100 Sobic002G080100 Sobic004G268900--Sobic002G080100 Sobic001G476100--Sobic001G321700 Sobic001G476100--Sobic004G106200 Sobic001G476100--Sobic004G138400 Sobic001G476100--Sobic009G111800 Sobic010G065001 Sobic010G065001 Sobic001G476100--Sobic010G065001 Sobic008G081500 Sobic008G081500 Sobic001G476100--Sobic008G081500 Sobic001G319000 Sobic001G319000 Sobic001G476100--Sobic001G319000 Sobic003G403600 Sobic003G403600 Sobic001G476100--Sobic003G403600 Sobic005G097500 Sobic005G097500 Sobic001G476100--Sobic005G097500 Sobic004G195800 Sobic004G195800 Sobic009G214300--Sobic004G195800 Sobic010G120800 Sobic010G120800 Sobic009G214300--Sobic010G120800 Sobic009G214300--Sobic002G174300 Sobic010G214200 Sobic010G214200 Sobic009G214300--Sobic010G214200 Sobic005G085500 Sobic005G085500 Sobic009G214300--Sobic005G085500 Sobic002G202700 Sobic002G202700 Sobic009G214300--Sobic002G202700 Sobic002G209100 Sobic002G209100 Sobic009G214300--Sobic002G209100 Sobic009G214300--Sobic010G163150 Sobic002G216500 Sobic002G216500 Sobic009G214300--Sobic002G216500 Sobic004G297600--Sobic006G257700 Sobic004G297600--Sobic010G102000 Sobic004G297600--Sobic009G010400 Sobic001G195100 Sobic001G195100 Sobic004G297600--Sobic001G195100 Sobic001G314800 Sobic001G314800 Sobic004G297600--Sobic001G314800 Sobic010G105300 Sobic010G105300 Sobic004G297600--Sobic010G105300 Sobic001G489500 Sobic001G489500 Sobic004G297600--Sobic001G489500 Sobic002G341900 Sobic002G341900 Sobic004G297600--Sobic002G341900 Sobic004G297600--Sobic001G064900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.