Gene annotation
Transcriptome id Sobic.001G304900.1
Synonym Sb01g029680
Functional annotation expressed protein
UniProt A0A1B6QM32 , A0A109NDJ4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g32470.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G305000 stress responsive protein, putative, expressed -
2 Sobic.002G034700 similar to Putative uncharacterized protein(PubMedID : 29862293)@CAMK_KIN1/SNF1/Nim1_like.28 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
3 Sobic.002G366800 RNA recognition motif containing protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
4 Sobic.002G397900 39S ribosomal protein L46, mitochondrial precursor, putative, expressed K17427: large subunit ribosomal protein L46
5 Sobic.010G042000 OsFBX9 - F-box domain containing protein, expressed -
6 Sobic.007G218600 phosphoribosyl transferase, putative, expressed K00761: upp, uracil phosphoribosyltransferase
7 Sobic.007G117800 cytochrome b561, putative, expressed K08360: cytochrome b-561
8 Sobic.001G057600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@stem-specific protein TSJT1, putative, expressed -
9 Sobic.010G225201 - -
10 Sobic.006G012700 expressed protein -
11 Sobic.007G158900 expressed protein -
12 Sobic.009G088800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@aminotransferase domain containing protein, putative, expressed K18482: 4-amino-4-deoxychorismate lyase
13 Sobic.003G346500 similar to Nuclear transcription factor Y subunit B-3(PubMedID : 29862293)@tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed K08065: NFYB, nuclear transcription Y subunit beta
14 Sobic.003G043800 BT1 family protein, putative, expressed -
15 Sobic.003G129900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
16 Sobic.006G060000 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
17 Sobic.002G007800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
18 Sobic.006G219900 csAtPR5, putative, expressed -
19 Sobic.002G054700 indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K01695: tryptophan synthase alpha chain
20 Sobic.002G295700 transporter family protein, putative, expressed -


Gene co-expression network
sample Sobic001G304900 Sobic001G304900 Sobic001G305000 Sobic001G305000 Sobic001G304900--Sobic001G305000 Sobic002G034700 Sobic002G034700 Sobic001G304900--Sobic002G034700 Sobic002G366800 Sobic002G366800 Sobic001G304900--Sobic002G366800 Sobic002G397900 Sobic002G397900 Sobic001G304900--Sobic002G397900 Sobic010G042000 Sobic010G042000 Sobic001G304900--Sobic010G042000 Sobic007G218600 Sobic007G218600 Sobic001G304900--Sobic007G218600 Sobic007G117800 Sobic007G117800 Sobic001G304900--Sobic007G117800 Sobic001G057600 Sobic001G057600 Sobic001G304900--Sobic001G057600 Sobic010G225201 Sobic010G225201 Sobic001G304900--Sobic010G225201 Sobic010G155701 Sobic010G155701 Sobic001G305000--Sobic010G155701 Sobic003G023732 Sobic003G023732 Sobic001G305000--Sobic003G023732 Sobic005G018600 Sobic005G018600 Sobic001G305000--Sobic005G018600 Sobic008G082000 Sobic008G082000 Sobic001G305000--Sobic008G082000 Sobic003G180950 Sobic003G180950 Sobic001G305000--Sobic003G180950 Sobic001G039100 Sobic001G039100 Sobic001G305000--Sobic001G039100 Sobic006G267100 Sobic006G267100 Sobic001G305000--Sobic006G267100 Sobic007G196700 Sobic007G196700 Sobic001G305000--Sobic007G196700 Sobic008G006700 Sobic008G006700 Sobic001G305000--Sobic008G006700 Sobic001G485000 Sobic001G485000 Sobic002G034700--Sobic001G485000 Sobic006G120900 Sobic006G120900 Sobic002G034700--Sobic006G120900 Sobic001G020700 Sobic001G020700 Sobic002G034700--Sobic001G020700 Sobic007G138100 Sobic007G138100 Sobic002G034700--Sobic007G138100 Sobic002G034700--Sobic002G397900 Sobic003G129900 Sobic003G129900 Sobic002G034700--Sobic003G129900 Sobic001G387200 Sobic001G387200 Sobic002G034700--Sobic001G387200 Sobic009G017600 Sobic009G017600 Sobic002G034700--Sobic009G017600 Sobic003G380300 Sobic003G380300 Sobic002G034700--Sobic003G380300 Sobic008G018300 Sobic008G018300 Sobic002G366800--Sobic008G018300 Sobic002G366800--Sobic002G034700 Sobic002G366800--Sobic010G225201 Sobic003G113400 Sobic003G113400 Sobic002G366800--Sobic003G113400 Sobic002G366800--Sobic002G397900 Sobic002G366800--Sobic003G129900 Sobic005G044300 Sobic005G044300 Sobic002G366800--Sobic005G044300 Sobic002G259700 Sobic002G259700 Sobic002G366800--Sobic002G259700 Sobic002G366800--Sobic001G387200 Sobic003G349900 Sobic003G349900 Sobic002G397900--Sobic003G349900 Sobic001G280500 Sobic001G280500 Sobic002G397900--Sobic001G280500 Sobic003G089100 Sobic003G089100 Sobic002G397900--Sobic003G089100 Sobic004G074600 Sobic004G074600 Sobic002G397900--Sobic004G074600 Sobic002G213900 Sobic002G213900 Sobic002G397900--Sobic002G213900 Sobic002G414800 Sobic002G414800 Sobic002G397900--Sobic002G414800 Sobic002G054700 Sobic002G054700 Sobic002G397900--Sobic002G054700 Sobic001G356200 Sobic001G356200 Sobic002G397900--Sobic001G356200 Sobic003G201500 Sobic003G201500 Sobic002G397900--Sobic003G201500 Sobic001G457700 Sobic001G457700 Sobic010G042000--Sobic001G457700 Sobic001G034000 Sobic001G034000 Sobic010G042000--Sobic001G034000 Sobic006G142400 Sobic006G142400 Sobic010G042000--Sobic006G142400 Sobic010G264000 Sobic010G264000 Sobic010G042000--Sobic010G264000 Sobic003G214300 Sobic003G214300 Sobic010G042000--Sobic003G214300 Sobic004G334200 Sobic004G334200 Sobic010G042000--Sobic004G334200 Sobic004G202300 Sobic004G202300 Sobic010G042000--Sobic004G202300 Sobic003G348200 Sobic003G348200 Sobic010G042000--Sobic003G348200 Sobic010G042000--Sobic003G113400 Sobic009G186700 Sobic009G186700 Sobic007G218600--Sobic009G186700 Sobic001G305900 Sobic001G305900 Sobic007G218600--Sobic001G305900 Sobic007G148400 Sobic007G148400 Sobic007G218600--Sobic007G148400 Sobic003G255700 Sobic003G255700 Sobic007G218600--Sobic003G255700 Sobic007G218600--Sobic001G280500 Sobic003G308300 Sobic003G308300 Sobic007G218600--Sobic003G308300 Sobic001G114200 Sobic001G114200 Sobic007G218600--Sobic001G114200 Sobic010G181600 Sobic010G181600 Sobic007G218600--Sobic010G181600 Sobic010G160300 Sobic010G160300 Sobic007G218600--Sobic010G160300 Sobic003G148900 Sobic003G148900 Sobic007G117800--Sobic003G148900 Sobic001G443200 Sobic001G443200 Sobic007G117800--Sobic001G443200 Sobic002G401700 Sobic002G401700 Sobic007G117800--Sobic002G401700 Sobic003G276100 Sobic003G276100 Sobic007G117800--Sobic003G276100 Sobic007G012900 Sobic007G012900 Sobic007G117800--Sobic007G012900 Sobic005G184200 Sobic005G184200 Sobic007G117800--Sobic005G184200 Sobic004G159000 Sobic004G159000 Sobic007G117800--Sobic004G159000 Sobic003G200600 Sobic003G200600 Sobic007G117800--Sobic003G200600 Sobic002G262200 Sobic002G262200 Sobic007G117800--Sobic002G262200 Sobic009G088800 Sobic009G088800 Sobic001G057600--Sobic009G088800 Sobic006G118400 Sobic006G118400 Sobic001G057600--Sobic006G118400 Sobic004G186300 Sobic004G186300 Sobic001G057600--Sobic004G186300 Sobic001G118300 Sobic001G118300 Sobic001G057600--Sobic001G118300 Sobic004G192800 Sobic004G192800 Sobic001G057600--Sobic004G192800 Sobic005G019100 Sobic005G019100 Sobic001G057600--Sobic005G019100 Sobic009G050000 Sobic009G050000 Sobic001G057600--Sobic009G050000 Sobic001G057600--Sobic005G044300 Sobic008G129000 Sobic008G129000 Sobic001G057600--Sobic008G129000 Sobic002G034750 Sobic002G034750 Sobic010G225201--Sobic002G034750 Sobic010G039000 Sobic010G039000 Sobic010G225201--Sobic010G039000 Sobic001G504500 Sobic001G504500 Sobic010G225201--Sobic001G504500 Sobic008G006000 Sobic008G006000 Sobic010G225201--Sobic008G006000 Sobic010G255900 Sobic010G255900 Sobic010G225201--Sobic010G255900 Sobic010G225201--Sobic002G397900 Sobic004G100100 Sobic004G100100 Sobic010G225201--Sobic004G100100 Sobic005G170000 Sobic005G170000 Sobic010G225201--Sobic005G170000 Sobic007G219500 Sobic007G219500 Sobic010G225201--Sobic007G219500
Octagon: transcription factors


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