Gene annotation
Transcriptome id Sobic.001G316100.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QM85
Pfam PF11947
Panther DB PTHR34575 PTHR34575:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G19100 : Protein of unknown function (DUF3464)
RAP-DB (Rice) LOC_Os10g38910.1 : expressed protein
MaizeGDB (Corn) Zm00025a003129
Brachypodium KQJ97570
Barley HORVU1Hr1G049470.1
Wheat -
Populus -


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cDNA sequences
Sobic.001G316100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G079700 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
2 Sobic.001G255400 - -
3 Sobic.004G270400 amino acid permease family protein, putative, expressed -
4 Sobic.004G055600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide containing protein, putative, expressed -
5 Sobic.001G310800 lectin-like receptor kinase, putative, expressed -
6 Sobic.001G407900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase C, putative, expressed -
7 Sobic.004G187100 BTBN2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
8 Sobic.003G255100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.003G089600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
10 Sobic.001G275200 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
11 Sobic.002G004000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxygen evolving enhancer protein 3 domain containing protein, expressed K08901: photosystem II oxygen-evolving enhancer protein 3
12 Sobic.001G093600 - -
13 Sobic.010G182800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like receptor kinase 1, putative, expressed -
14 Sobic.006G269400 expressed protein -
15 Sobic.010G108500 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
16 Sobic.010G082800 calvin cycle protein CP12, putative, expressed -
17 Sobic.001G161100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
18 Sobic.001G281800 enzyme of the cupin superfamily protein, putative, expressed -
19 Sobic.001G120000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
20 Sobic.003G107300 light-induced protein 1-like, putative, expressed -


Gene co-expression network
sample Sobic001G316100 Sobic001G316100 Sobic010G079700 Sobic010G079700 Sobic001G316100--Sobic010G079700 Sobic001G255400 Sobic001G255400 Sobic001G316100--Sobic001G255400 Sobic004G270400 Sobic004G270400 Sobic001G316100--Sobic004G270400 Sobic004G055600 Sobic004G055600 Sobic001G316100--Sobic004G055600 Sobic001G310800 Sobic001G310800 Sobic001G316100--Sobic001G310800 Sobic001G407900 Sobic001G407900 Sobic001G316100--Sobic001G407900 Sobic004G187100 Sobic004G187100 Sobic001G316100--Sobic004G187100 Sobic003G255100 Sobic003G255100 Sobic001G316100--Sobic003G255100 Sobic003G089600 Sobic003G089600 Sobic001G316100--Sobic003G089600 Sobic010G079700--Sobic003G255100 Sobic001G030500 Sobic001G030500 Sobic010G079700--Sobic001G030500 Sobic006G269400 Sobic006G269400 Sobic010G079700--Sobic006G269400 Sobic002G155900 Sobic002G155900 Sobic010G079700--Sobic002G155900 Sobic001G093600 Sobic001G093600 Sobic010G079700--Sobic001G093600 Sobic002G287000 Sobic002G287000 Sobic010G079700--Sobic002G287000 Sobic001G179100 Sobic001G179100 Sobic010G079700--Sobic001G179100 Sobic001G005500 Sobic001G005500 Sobic010G079700--Sobic001G005500 Sobic002G271600 Sobic002G271600 Sobic010G079700--Sobic002G271600 Sobic001G120000 Sobic001G120000 Sobic001G255400--Sobic001G120000 Sobic001G255400--Sobic004G055600 Sobic002G004000 Sobic002G004000 Sobic001G255400--Sobic002G004000 Sobic009G233800 Sobic009G233800 Sobic001G255400--Sobic009G233800 Sobic006G204100 Sobic006G204100 Sobic001G255400--Sobic006G204100 Sobic006G265400 Sobic006G265400 Sobic001G255400--Sobic006G265400 Sobic001G076200 Sobic001G076200 Sobic001G255400--Sobic001G076200 Sobic003G283100 Sobic003G283100 Sobic001G255400--Sobic003G283100 Sobic001G426400 Sobic001G426400 Sobic001G255400--Sobic001G426400 Sobic002G195700 Sobic002G195700 Sobic004G270400--Sobic002G195700 Sobic004G270400--Sobic001G005500 Sobic001G321600 Sobic001G321600 Sobic004G270400--Sobic001G321600 Sobic008G073400 Sobic008G073400 Sobic004G270400--Sobic008G073400 Sobic004G270400--Sobic006G269400 Sobic010G082800 Sobic010G082800 Sobic004G270400--Sobic010G082800 Sobic002G366100 Sobic002G366100 Sobic004G270400--Sobic002G366100 Sobic010G089200 Sobic010G089200 Sobic004G270400--Sobic010G089200 Sobic001G019300 Sobic001G019300 Sobic004G270400--Sobic001G019300 Sobic004G055600--Sobic009G233800 Sobic004G055600--Sobic002G004000 Sobic004G055600--Sobic001G076200 Sobic004G055600--Sobic001G255400 Sobic009G136900 Sobic009G136900 Sobic004G055600--Sobic009G136900 Sobic001G388400 Sobic001G388400 Sobic004G055600--Sobic001G388400 Sobic009G253000 Sobic009G253000 Sobic004G055600--Sobic009G253000 Sobic008G177850 Sobic008G177850 Sobic004G055600--Sobic008G177850 Sobic008G101500 Sobic008G101500 Sobic004G055600--Sobic008G101500 Sobic001G275200 Sobic001G275200 Sobic001G310800--Sobic001G275200 Sobic006G273000 Sobic006G273000 Sobic001G310800--Sobic006G273000 Sobic003G088800 Sobic003G088800 Sobic001G310800--Sobic003G088800 Sobic001G310800--Sobic001G019300 Sobic001G310800--Sobic006G269400 Sobic005G052000 Sobic005G052000 Sobic001G310800--Sobic005G052000 Sobic001G310800--Sobic001G005500 Sobic009G010700 Sobic009G010700 Sobic001G310800--Sobic009G010700 Sobic004G033900 Sobic004G033900 Sobic001G310800--Sobic004G033900 Sobic007G023300 Sobic007G023300 Sobic001G407900--Sobic007G023300 Sobic001G339100 Sobic001G339100 Sobic001G407900--Sobic001G339100 Sobic001G498300 Sobic001G498300 Sobic001G407900--Sobic001G498300 Sobic001G206200 Sobic001G206200 Sobic001G407900--Sobic001G206200 Sobic010G218600 Sobic010G218600 Sobic001G407900--Sobic010G218600 Sobic008G117400 Sobic008G117400 Sobic001G407900--Sobic008G117400 Sobic001G042301 Sobic001G042301 Sobic001G407900--Sobic001G042301 Sobic002G242000 Sobic002G242000 Sobic001G407900--Sobic002G242000 Sobic004G193400 Sobic004G193400 Sobic001G407900--Sobic004G193400 Sobic004G034500 Sobic004G034500 Sobic004G187100--Sobic004G034500 Sobic004G187100--Sobic004G033900 Sobic004G187100--Sobic001G316100 Sobic009G206400 Sobic009G206400 Sobic004G187100--Sobic009G206400 Sobic003G336200 Sobic003G336200 Sobic004G187100--Sobic003G336200 Sobic004G187100--Sobic010G082800 Sobic001G077100 Sobic001G077100 Sobic004G187100--Sobic001G077100 Sobic001G357800 Sobic001G357800 Sobic004G187100--Sobic001G357800 Sobic009G138900 Sobic009G138900 Sobic004G187100--Sobic009G138900 Sobic003G255100--Sobic010G079700 Sobic003G255100--Sobic001G093600 Sobic003G255100--Sobic002G155900 Sobic003G255100--Sobic001G005500 Sobic003G255100--Sobic001G179100 Sobic003G255100--Sobic001G030500 Sobic003G255100--Sobic006G269400 Sobic003G255100--Sobic002G287000 Sobic007G191900 Sobic007G191900 Sobic003G255100--Sobic007G191900 Sobic003G107300 Sobic003G107300 Sobic003G089600--Sobic003G107300 Sobic010G244500 Sobic010G244500 Sobic003G089600--Sobic010G244500 Sobic008G015300 Sobic008G015300 Sobic003G089600--Sobic008G015300 Sobic002G074300 Sobic002G074300 Sobic003G089600--Sobic002G074300 Sobic004G011566 Sobic004G011566 Sobic003G089600--Sobic004G011566 Sobic010G270900 Sobic010G270900 Sobic003G089600--Sobic010G270900 Sobic003G089600--Sobic001G093600 Sobic009G154600 Sobic009G154600 Sobic003G089600--Sobic009G154600 Sobic003G089600--Sobic004G055600
Octagon: transcription factors


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