Gene annotation
Transcriptome id Sobic.001G319400.1,Sobic.001G319400.3,Sobic.001G319400.2,Sobic.001G319400.4
Synonym
Functional annotation -
UniProt A0A1B6QMA8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G137100 bZIP transcription factor domain containing protein, expressed -
2 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin
3 Sobic.006G138000 expressed protein -
4 Sobic.007G041500 diacylglycerol kinase, putative, expressed -
5 Sobic.002G288000 bromodomain domain containing protein, expressed K11723: bromodomain-containing protein 7
6 Sobic.007G120500 Sec1 family transport protein, putative, expressed K12479: vacuolar protein sorting-associated protein 45
7 Sobic.001G369000 adapitin protein, putative, expressed K12392: AP-1 complex subunit beta-1
8 Sobic.007G079200 exonuclease, putative, expressed -
9 Sobic.003G401000 adaptin, putative, expressed K12400: AP-4 complex subunit epsilon-1
10 Sobic.009G229600 tRNA-binding arm, putative, expressed -
11 Sobic.007G010000 OsFBL6 - F-box domain and LRR containing protein, expressed -
12 Sobic.001G170100 WD domain, G-beta repeat domain containing protein, expressed -
13 Sobic.010G189000 protein with a conserved N-terminal region, putative, expressed -
14 Sobic.004G072100 centromere/kinetochore protein zw10, putative, expressed K11578: ZW10, protein transport protein DSL1/ZW10
15 Sobic.008G149800 histone acetyltransferase HAC5, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
16 Sobic.006G281700 DUF803 domain containing, putative, expressed -
17 Sobic.001G296500 ARABIDILLO-1, putative, expressed -
18 Sobic.006G211500 "GA biosynthetic gene, causes dwarfism accompanied by unusual culm bending in the mutants"(PubMedID : 24924234)@ent-kaurene synthase, chloroplast precursor, putative, expressed K04121: ent-kaurene synthase
19 Sobic.007G061700 vacuolar protein sorting-associated protein 18, putative, expressed -
20 Sobic.001G335900 vacuolar protein sorting-associated protein 52, putative, expressed -


Gene co-expression network
sample Sobic001G319400 Sobic001G319400 Sobic009G137100 Sobic009G137100 Sobic001G319400--Sobic009G137100 Sobic004G246100 Sobic004G246100 Sobic001G319400--Sobic004G246100 Sobic006G138000 Sobic006G138000 Sobic001G319400--Sobic006G138000 Sobic007G041500 Sobic007G041500 Sobic001G319400--Sobic007G041500 Sobic002G288000 Sobic002G288000 Sobic001G319400--Sobic002G288000 Sobic007G120500 Sobic007G120500 Sobic001G319400--Sobic007G120500 Sobic001G369000 Sobic001G369000 Sobic001G319400--Sobic001G369000 Sobic007G079200 Sobic007G079200 Sobic001G319400--Sobic007G079200 Sobic003G401000 Sobic003G401000 Sobic001G319400--Sobic003G401000 Sobic009G137100--Sobic004G246100 Sobic002G370900 Sobic002G370900 Sobic009G137100--Sobic002G370900 Sobic002G197100 Sobic002G197100 Sobic009G137100--Sobic002G197100 Sobic006G281700 Sobic006G281700 Sobic009G137100--Sobic006G281700 Sobic008G127400 Sobic008G127400 Sobic009G137100--Sobic008G127400 Sobic002G299100 Sobic002G299100 Sobic009G137100--Sobic002G299100 Sobic008G058800 Sobic008G058800 Sobic009G137100--Sobic008G058800 Sobic001G215400 Sobic001G215400 Sobic009G137100--Sobic001G215400 Sobic006G173100 Sobic006G173100 Sobic009G137100--Sobic006G173100 Sobic008G149800 Sobic008G149800 Sobic004G246100--Sobic008G149800 Sobic008G153000 Sobic008G153000 Sobic004G246100--Sobic008G153000 Sobic007G061700 Sobic007G061700 Sobic004G246100--Sobic007G061700 Sobic002G063900 Sobic002G063900 Sobic004G246100--Sobic002G063900 Sobic008G173100 Sobic008G173100 Sobic004G246100--Sobic008G173100 Sobic006G116100 Sobic006G116100 Sobic004G246100--Sobic006G116100 Sobic006G046700 Sobic006G046700 Sobic004G246100--Sobic006G046700 Sobic004G246100--Sobic009G137100 Sobic002G260400 Sobic002G260400 Sobic004G246100--Sobic002G260400 Sobic001G170100 Sobic001G170100 Sobic006G138000--Sobic001G170100 Sobic001G518400 Sobic001G518400 Sobic006G138000--Sobic001G518400 Sobic001G335900 Sobic001G335900 Sobic006G138000--Sobic001G335900 Sobic006G138000--Sobic001G369000 Sobic010G275500 Sobic010G275500 Sobic006G138000--Sobic010G275500 Sobic003G240700 Sobic003G240700 Sobic006G138000--Sobic003G240700 Sobic003G187500 Sobic003G187500 Sobic006G138000--Sobic003G187500 Sobic001G426600 Sobic001G426600 Sobic006G138000--Sobic001G426600 Sobic010G053800 Sobic010G053800 Sobic006G138000--Sobic010G053800 Sobic007G119200 Sobic007G119200 Sobic007G041500--Sobic007G119200 Sobic009G148300 Sobic009G148300 Sobic007G041500--Sobic009G148300 Sobic010G034000 Sobic010G034000 Sobic007G041500--Sobic010G034000 Sobic007G041500--Sobic008G153000 Sobic001G091400 Sobic001G091400 Sobic007G041500--Sobic001G091400 Sobic007G041500--Sobic004G246100 Sobic004G072100 Sobic004G072100 Sobic007G041500--Sobic004G072100 Sobic010G116600 Sobic010G116600 Sobic007G041500--Sobic010G116600 Sobic002G071500 Sobic002G071500 Sobic007G041500--Sobic002G071500 Sobic002G288000--Sobic006G138000 Sobic010G189000 Sobic010G189000 Sobic002G288000--Sobic010G189000 Sobic006G183800 Sobic006G183800 Sobic002G288000--Sobic006G183800 Sobic002G288000--Sobic001G518400 Sobic002G288000--Sobic003G401000 Sobic002G423200 Sobic002G423200 Sobic002G288000--Sobic002G423200 Sobic001G094000 Sobic001G094000 Sobic002G288000--Sobic001G094000 Sobic004G325400 Sobic004G325400 Sobic002G288000--Sobic004G325400 Sobic006G028200 Sobic006G028200 Sobic002G288000--Sobic006G028200 Sobic007G120500--Sobic001G369000 Sobic004G039600 Sobic004G039600 Sobic007G120500--Sobic004G039600 Sobic007G132100 Sobic007G132100 Sobic007G120500--Sobic007G132100 Sobic006G012500 Sobic006G012500 Sobic007G120500--Sobic006G012500 Sobic003G057700 Sobic003G057700 Sobic007G120500--Sobic003G057700 Sobic003G249600 Sobic003G249600 Sobic007G120500--Sobic003G249600 Sobic007G120500--Sobic004G072100 Sobic007G120500--Sobic010G053800 Sobic003G394200 Sobic003G394200 Sobic007G120500--Sobic003G394200 Sobic001G369000--Sobic004G039600 Sobic001G369000--Sobic001G335900 Sobic001G369000--Sobic007G120500 Sobic001G369000--Sobic003G240700 Sobic006G163800 Sobic006G163800 Sobic001G369000--Sobic006G163800 Sobic001G369000--Sobic006G138000 Sobic009G049400 Sobic009G049400 Sobic001G369000--Sobic009G049400 Sobic001G369000--Sobic001G426600 Sobic009G229600 Sobic009G229600 Sobic001G369000--Sobic009G229600 Sobic003G176400 Sobic003G176400 Sobic007G079200--Sobic003G176400 Sobic007G079200--Sobic001G094000 Sobic007G079200--Sobic010G189000 Sobic009G040700 Sobic009G040700 Sobic007G079200--Sobic009G040700 Sobic002G158700 Sobic002G158700 Sobic007G079200--Sobic002G158700 Sobic007G079200--Sobic006G046700 Sobic004G031700 Sobic004G031700 Sobic007G079200--Sobic004G031700 Sobic001G477800 Sobic001G477800 Sobic007G079200--Sobic001G477800 Sobic001G296500 Sobic001G296500 Sobic007G079200--Sobic001G296500 Sobic003G401000--Sobic002G158700 Sobic003G187400 Sobic003G187400 Sobic003G401000--Sobic003G187400 Sobic002G157300 Sobic002G157300 Sobic003G401000--Sobic002G157300 Sobic009G257800 Sobic009G257800 Sobic003G401000--Sobic009G257800 Sobic001G155000 Sobic001G155000 Sobic003G401000--Sobic001G155000 Sobic003G401000--Sobic009G040700 Sobic003G401000--Sobic001G094000 Sobic003G401000--Sobic006G028200 Sobic003G008500 Sobic003G008500 Sobic003G401000--Sobic003G008500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.