Gene annotation
Transcriptome id Sobic.001G322100.1
Synonym Sb01g031240
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
hydrolase, alpha/beta fold family protein, putative, expressed
UniProt C5WUM3
Pfam PF12695
Panther DB PTHR10992 PTHR10992:SF897
NCBI CDD KOG1454; Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G74300 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os10g37720.1 : hydrolase, alpha/beta fold family protein, putative, expressed
MaizeGDB (Corn) Zm00025a003070
Brachypodium KQJ97500
Barley HORVU1Hr1G048530.3 , HORVU1Hr1G048530.2 , HORVU1Hr1G048530.1 , HORVU1Hr1G048530.4 , HORVU1Hr1G048550.4 , HORVU1Hr1G048550.1 , HORVU1Hr1G048550.3 , HORVU1Hr1G048550.2
Wheat TraesCS1A02G189200 , TraesCS5A02G526300 , TraesCS1D02G187100 , TraesCS1D02G187200 , TraesCS1B02G196900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G302200 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsSAUR11 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
2 Sobic.004G062500 "4-coumaroyl-CoA synthetase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Brown midrib2 (Bmr2) encodes the major 4-coumarate:coenzyme A ligase involved in lignin biosynthesis(PubMedID : 22313236)@4-Coumarate: Coenzyme A Ligase (4CL)(PubMedID : 22313236)@AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
3 Sobic.004G308400 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
4 Sobic.003G417000 esterase, putative, expressed -
5 Sobic.001G432700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.001G346000 UNE2, putative, expressed -
7 Sobic.001G428200 expressed protein -
8 Sobic.002G109400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@LTPL40 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.010G267100 zinc finger family protein, putative, expressed -
10 Sobic.010G268400 eukaryotic aspartyl protease domain containing protein, expressed -
11 Sobic.003G429200 NADPH quinone oxidoreductase, putative, expressed -
12 Sobic.002G198500 basic helix-loop-helix family protein, putative, expressed -
13 Sobic.007G157900 gibberellin receptor GID1L2, putative, expressed -
14 Sobic.002G415000 POEI49 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
15 Sobic.001G353600 expressed protein -
16 Sobic.003G384700 pectinacetylesterase domain containing protein, expressed -
17 Sobic.004G351500 - -
18 Sobic.010G195500 reductase, putative, expressed -
19 Sobic.007G127100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
20 Sobic.010G041600 profilin domain containing protein, expressed K05759: profilin


Gene co-expression network
sample Sobic001G322100 Sobic001G322100 Sobic004G302200 Sobic004G302200 Sobic001G322100--Sobic004G302200 Sobic004G062500 Sobic004G062500 Sobic001G322100--Sobic004G062500 Sobic004G308400 Sobic004G308400 Sobic001G322100--Sobic004G308400 Sobic003G417000 Sobic003G417000 Sobic001G322100--Sobic003G417000 Sobic001G432700 Sobic001G432700 Sobic001G322100--Sobic001G432700 Sobic001G346000 Sobic001G346000 Sobic001G322100--Sobic001G346000 Sobic001G428200 Sobic001G428200 Sobic001G322100--Sobic001G428200 Sobic002G109400 Sobic002G109400 Sobic001G322100--Sobic002G109400 Sobic010G267100 Sobic010G267100 Sobic001G322100--Sobic010G267100 Sobic010G136000 Sobic010G136000 Sobic004G302200--Sobic010G136000 Sobic003G320800 Sobic003G320800 Sobic004G302200--Sobic003G320800 Sobic010G268400 Sobic010G268400 Sobic004G302200--Sobic010G268400 Sobic004G302200--Sobic001G432700 Sobic003G135700 Sobic003G135700 Sobic004G302200--Sobic003G135700 Sobic002G407100 Sobic002G407100 Sobic004G302200--Sobic002G407100 Sobic002G319500 Sobic002G319500 Sobic004G302200--Sobic002G319500 Sobic002G373001 Sobic002G373001 Sobic004G302200--Sobic002G373001 Sobic009G065300 Sobic009G065300 Sobic004G302200--Sobic009G065300 Sobic010G252500 Sobic010G252500 Sobic004G062500--Sobic010G252500 Sobic010G195500 Sobic010G195500 Sobic004G062500--Sobic010G195500 Sobic004G212300 Sobic004G212300 Sobic004G062500--Sobic004G212300 Sobic007G218800 Sobic007G218800 Sobic004G062500--Sobic007G218800 Sobic010G085800 Sobic010G085800 Sobic004G062500--Sobic010G085800 Sobic003G119500 Sobic003G119500 Sobic004G062500--Sobic003G119500 Sobic004G062500--Sobic010G268400 Sobic001G494000 Sobic001G494000 Sobic004G062500--Sobic001G494000 Sobic003G219800 Sobic003G219800 Sobic004G062500--Sobic003G219800 Sobic004G308400--Sobic010G268400 Sobic006G182100 Sobic006G182100 Sobic004G308400--Sobic006G182100 Sobic010G041600 Sobic010G041600 Sobic004G308400--Sobic010G041600 Sobic004G066600 Sobic004G066600 Sobic004G308400--Sobic004G066600 Sobic002G345300 Sobic002G345300 Sobic004G308400--Sobic002G345300 Sobic001G353600 Sobic001G353600 Sobic004G308400--Sobic001G353600 Sobic001G536500 Sobic001G536500 Sobic004G308400--Sobic001G536500 Sobic005G228000 Sobic005G228000 Sobic004G308400--Sobic005G228000 Sobic001G034700 Sobic001G034700 Sobic004G308400--Sobic001G034700 Sobic003G325500 Sobic003G325500 Sobic003G417000--Sobic003G325500 Sobic004G114400 Sobic004G114400 Sobic003G417000--Sobic004G114400 Sobic003G417000--Sobic001G428200 Sobic005G000100 Sobic005G000100 Sobic003G417000--Sobic005G000100 Sobic006G242900 Sobic006G242900 Sobic003G417000--Sobic006G242900 Sobic010G122800 Sobic010G122800 Sobic003G417000--Sobic010G122800 Sobic004G209500 Sobic004G209500 Sobic003G417000--Sobic004G209500 Sobic005G064800 Sobic005G064800 Sobic003G417000--Sobic005G064800 Sobic003G199600 Sobic003G199600 Sobic003G417000--Sobic003G199600 Sobic001G432700--Sobic002G407100 Sobic007G127100 Sobic007G127100 Sobic001G432700--Sobic007G127100 Sobic001G403300 Sobic001G403300 Sobic001G432700--Sobic001G403300 Sobic006G068800 Sobic006G068800 Sobic001G432700--Sobic006G068800 Sobic001G432700--Sobic009G065300 Sobic001G432700--Sobic010G195500 Sobic005G080200 Sobic005G080200 Sobic001G432700--Sobic005G080200 Sobic002G327300 Sobic002G327300 Sobic001G432700--Sobic002G327300 Sobic001G432700--Sobic004G302200 Sobic003G362100 Sobic003G362100 Sobic001G346000--Sobic003G362100 Sobic009G240600 Sobic009G240600 Sobic001G346000--Sobic009G240600 Sobic007G025500 Sobic007G025500 Sobic001G346000--Sobic007G025500 Sobic006G099900 Sobic006G099900 Sobic001G346000--Sobic006G099900 Sobic005G206601 Sobic005G206601 Sobic001G346000--Sobic005G206601 Sobic007G227300 Sobic007G227300 Sobic001G346000--Sobic007G227300 Sobic003G437200 Sobic003G437200 Sobic001G346000--Sobic003G437200 Sobic009G198000 Sobic009G198000 Sobic001G346000--Sobic009G198000 Sobic010G009300 Sobic010G009300 Sobic001G346000--Sobic010G009300 Sobic001G087900 Sobic001G087900 Sobic001G428200--Sobic001G087900 Sobic004G351500 Sobic004G351500 Sobic001G428200--Sobic004G351500 Sobic009G131100 Sobic009G131100 Sobic001G428200--Sobic009G131100 Sobic003G369500 Sobic003G369500 Sobic001G428200--Sobic003G369500 Sobic001G428200--Sobic001G353600 Sobic001G428200--Sobic003G325500 Sobic004G225500 Sobic004G225500 Sobic001G428200--Sobic004G225500 Sobic004G060600 Sobic004G060600 Sobic001G428200--Sobic004G060600 Sobic009G198500 Sobic009G198500 Sobic001G428200--Sobic009G198500 Sobic005G038900 Sobic005G038900 Sobic002G109400--Sobic005G038900 Sobic008G011600 Sobic008G011600 Sobic002G109400--Sobic008G011600 Sobic002G109400--Sobic004G225500 Sobic004G284500 Sobic004G284500 Sobic002G109400--Sobic004G284500 Sobic002G109400--Sobic001G353600 Sobic004G158901 Sobic004G158901 Sobic002G109400--Sobic004G158901 Sobic002G109400--Sobic010G041600 Sobic002G109400--Sobic004G351500 Sobic008G059200 Sobic008G059200 Sobic002G109400--Sobic008G059200 Sobic010G267100--Sobic001G432700 Sobic010G267100--Sobic004G302200 Sobic003G360200 Sobic003G360200 Sobic010G267100--Sobic003G360200 Sobic010G192900 Sobic010G192900 Sobic010G267100--Sobic010G192900 Sobic007G108700 Sobic007G108700 Sobic010G267100--Sobic007G108700 Sobic002G356500 Sobic002G356500 Sobic010G267100--Sobic002G356500 Sobic003G125500 Sobic003G125500 Sobic010G267100--Sobic003G125500 Sobic006G009000 Sobic006G009000 Sobic010G267100--Sobic006G009000 Sobic003G024900 Sobic003G024900 Sobic010G267100--Sobic003G024900
Octagon: transcription factors


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