Gene annotation
Transcriptome id Sobic.001G344900.1
Synonym Sb01g033100
Functional annotation jacalin-like lectin domain containing protein, expressed
UniProt C5WXJ5
Pfam PF01419
Panther DB PTHR23244 PTHR23244:SF320
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G73040 : Mannose-binding lectin superfamily protein
RAP-DB (Rice) LOC_Os04g30040.2 : jacalin-like lectin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a052149
Brachypodium -
Barley HORVU7Hr1G030210.2 , HORVU7Hr1G030210.1
Wheat TraesCS7D02G149200 , TraesCS7A02G147400
Populus -


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cDNA sequences
Sobic.001G344900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G013700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@high-affinity nickel-transport family protein, putative, expressed -
2 Sobic.008G119300 - -
3 Sobic.002G267900 expressed protein -
4 Sobic.007G165500 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
5 Sobic.010G215500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed K17710: pentatricopeptide repeat domain-containing protein 1
6 Sobic.003G022300 SOUL heme-binding protein, putative, expressed -
7 Sobic.002G272100 expressed protein -
8 Sobic.004G020300 expressed protein -
9 Sobic.001G221300 alcohol oxidase, putative, expressed K17756: long-chain-alcohol oxidase
10 Sobic.002G249900 dehydrogenase, putative, expressed -
11 Sobic.007G123800 DUF581 domain containing protein, expressed -
12 Sobic.009G131800 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
13 Sobic.010G035200 whirly transcription factor domain containing protein, expressed -
14 Sobic.001G405700 - -
15 Sobic.004G326500 PAP fibrillin family domain containing protein, expressed -
16 Sobic.001G104800 expressed protein -
17 Sobic.004G312800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine phosphatase family protein, putative, expressed K18045: SIW14, tyrosine-protein phosphatase SIW14
18 Sobic.009G238300 expressed protein -
19 Sobic.003G328200 thylakoid lumenal 20 kDa protein, putative, expressed -
20 Sobic.004G280100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic001G344900 Sobic001G344900 Sobic010G013700 Sobic010G013700 Sobic001G344900--Sobic010G013700 Sobic008G119300 Sobic008G119300 Sobic001G344900--Sobic008G119300 Sobic002G267900 Sobic002G267900 Sobic001G344900--Sobic002G267900 Sobic007G165500 Sobic007G165500 Sobic001G344900--Sobic007G165500 Sobic010G215500 Sobic010G215500 Sobic001G344900--Sobic010G215500 Sobic003G022300 Sobic003G022300 Sobic001G344900--Sobic003G022300 Sobic002G272100 Sobic002G272100 Sobic001G344900--Sobic002G272100 Sobic004G020300 Sobic004G020300 Sobic001G344900--Sobic004G020300 Sobic001G221300 Sobic001G221300 Sobic001G344900--Sobic001G221300 Sobic004G164100 Sobic004G164100 Sobic010G013700--Sobic004G164100 Sobic010G035200 Sobic010G035200 Sobic010G013700--Sobic010G035200 Sobic010G013700--Sobic010G215500 Sobic004G326500 Sobic004G326500 Sobic010G013700--Sobic004G326500 Sobic007G171800 Sobic007G171800 Sobic010G013700--Sobic007G171800 Sobic002G198000 Sobic002G198000 Sobic010G013700--Sobic002G198000 Sobic001G527100 Sobic001G527100 Sobic010G013700--Sobic001G527100 Sobic004G019300 Sobic004G019300 Sobic010G013700--Sobic004G019300 Sobic002G306201 Sobic002G306201 Sobic010G013700--Sobic002G306201 Sobic008G119300--Sobic002G267900 Sobic001G175700 Sobic001G175700 Sobic008G119300--Sobic001G175700 Sobic009G131800 Sobic009G131800 Sobic008G119300--Sobic009G131800 Sobic002G271700 Sobic002G271700 Sobic008G119300--Sobic002G271700 Sobic008G172700 Sobic008G172700 Sobic008G119300--Sobic008G172700 Sobic006G050400 Sobic006G050400 Sobic008G119300--Sobic006G050400 Sobic008G119250 Sobic008G119250 Sobic008G119300--Sobic008G119250 Sobic004G012900 Sobic004G012900 Sobic008G119300--Sobic004G012900 Sobic008G119300--Sobic002G272100 Sobic002G267900--Sobic008G172700 Sobic004G055000 Sobic004G055000 Sobic002G267900--Sobic004G055000 Sobic002G267900--Sobic002G272100 Sobic010G277600 Sobic010G277600 Sobic002G267900--Sobic010G277600 Sobic009G183700 Sobic009G183700 Sobic002G267900--Sobic009G183700 Sobic002G267900--Sobic004G326500 Sobic002G401800 Sobic002G401800 Sobic002G267900--Sobic002G401800 Sobic002G267900--Sobic008G119300 Sobic002G267900--Sobic002G198000 Sobic002G297900 Sobic002G297900 Sobic007G165500--Sobic002G297900 Sobic009G238300 Sobic009G238300 Sobic007G165500--Sobic009G238300 Sobic007G165500--Sobic004G326500 Sobic007G165500--Sobic002G267900 Sobic004G311100 Sobic004G311100 Sobic007G165500--Sobic004G311100 Sobic002G353300 Sobic002G353300 Sobic007G165500--Sobic002G353300 Sobic007G165500--Sobic004G020300 Sobic007G165500--Sobic008G172700 Sobic003G328200 Sobic003G328200 Sobic007G165500--Sobic003G328200 Sobic003G295800 Sobic003G295800 Sobic010G215500--Sobic003G295800 Sobic007G185100 Sobic007G185100 Sobic010G215500--Sobic007G185100 Sobic010G215500--Sobic003G328200 Sobic003G383600 Sobic003G383600 Sobic010G215500--Sobic003G383600 Sobic007G013400 Sobic007G013400 Sobic010G215500--Sobic007G013400 Sobic010G215500--Sobic002G297900 Sobic004G076000 Sobic004G076000 Sobic010G215500--Sobic004G076000 Sobic004G317900 Sobic004G317900 Sobic010G215500--Sobic004G317900 Sobic004G335800 Sobic004G335800 Sobic010G215500--Sobic004G335800 Sobic002G227700 Sobic002G227700 Sobic003G022300--Sobic002G227700 Sobic003G022300--Sobic004G020300 Sobic003G022300--Sobic001G221300 Sobic001G295300 Sobic001G295300 Sobic003G022300--Sobic001G295300 Sobic009G210200 Sobic009G210200 Sobic003G022300--Sobic009G210200 Sobic001G033100 Sobic001G033100 Sobic003G022300--Sobic001G033100 Sobic006G067400 Sobic006G067400 Sobic003G022300--Sobic006G067400 Sobic004G343900 Sobic004G343900 Sobic003G022300--Sobic004G343900 Sobic007G004700 Sobic007G004700 Sobic003G022300--Sobic007G004700 Sobic002G272100--Sobic002G401800 Sobic008G073100 Sobic008G073100 Sobic002G272100--Sobic008G073100 Sobic001G368500 Sobic001G368500 Sobic002G272100--Sobic001G368500 Sobic008G050400 Sobic008G050400 Sobic002G272100--Sobic008G050400 Sobic008G039600 Sobic008G039600 Sobic002G272100--Sobic008G039600 Sobic002G351600 Sobic002G351600 Sobic002G272100--Sobic002G351600 Sobic002G272100--Sobic002G267900 Sobic001G083100 Sobic001G083100 Sobic002G272100--Sobic001G083100 Sobic005G110400 Sobic005G110400 Sobic002G272100--Sobic005G110400 Sobic004G020300--Sobic009G131800 Sobic004G020300--Sobic009G210200 Sobic004G020300--Sobic002G272100 Sobic001G405700 Sobic001G405700 Sobic004G020300--Sobic001G405700 Sobic004G020300--Sobic002G267900 Sobic004G020300--Sobic008G172700 Sobic004G343000 Sobic004G343000 Sobic004G020300--Sobic004G343000 Sobic006G021600 Sobic006G021600 Sobic004G020300--Sobic006G021600 Sobic004G020300--Sobic003G022300 Sobic003G069200 Sobic003G069200 Sobic001G221300--Sobic003G069200 Sobic003G150600 Sobic003G150600 Sobic001G221300--Sobic003G150600 Sobic003G433900 Sobic003G433900 Sobic001G221300--Sobic003G433900 Sobic002G198600 Sobic002G198600 Sobic001G221300--Sobic002G198600 Sobic001G221300--Sobic002G227700 Sobic003G386300 Sobic003G386300 Sobic001G221300--Sobic003G386300 Sobic006G248200 Sobic006G248200 Sobic001G221300--Sobic006G248200 Sobic006G013800 Sobic006G013800 Sobic001G221300--Sobic006G013800 Sobic001G221300--Sobic004G311100
Octagon: transcription factors


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