Gene annotation
Transcriptome id Sobic.001G353250.1
Synonym -
Functional annotation -
UniProt A0A1Z5S980
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G002100 - -
2 Sobic.007G213700 -(PubMedID : 26976818)@aminotransferase, putative, expressed K00830: alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase
3 Sobic.006G172900 scarecrow, putative, expressed -
4 Sobic.001G118100 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
5 Sobic.007G204900 extracellular ligand-gated ion channel, putative, expressed -
6 Sobic.005G063700 OsFBW2 - F-box domain and WD40 repeat containing protein, expressed -
7 Sobic.010G096300 -(PubMedID : 22968911)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GLK genes are members of the GARP superfamily and functions in a BS or M cell-type specific manner to regulate the proplastid to chloroplast transition(PubMedID : 22968911)@myb-like DNA-binding domain containing protein, expressed -
8 Sobic.007G152600 cytochrome P450, putative, expressed -
9 Sobic.004G144700 ABC transporter family protein, putative, expressed -
10 Sobic.004G284300 - -
11 Sobic.004G359700 - -
12 Sobic.002G000700 expressed protein -
13 Sobic.003G305000 Unnamed(PubMedID : 24676859)@CIN-like (ClassII) Subclade 9 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
14 Sobic.004G001300 -(PubMedID : 26976818)@erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15893: glycerate dehydrogenase
15 Sobic.001G201966 - -
16 Sobic.001G098301 - -
17 Sobic.009G191100 expressed protein -
18 Sobic.001G102300 homeobox domain containing protein, expressed -
19 Sobic.007G182200 - -
20 Sobic.001G261496 - -


Gene co-expression network
sample Sobic001G353250 Sobic001G353250 Sobic001G002100 Sobic001G002100 Sobic001G353250--Sobic001G002100 Sobic007G213700 Sobic007G213700 Sobic001G353250--Sobic007G213700 Sobic006G172900 Sobic006G172900 Sobic001G353250--Sobic006G172900 Sobic001G118100 Sobic001G118100 Sobic001G353250--Sobic001G118100 Sobic007G204900 Sobic007G204900 Sobic001G353250--Sobic007G204900 Sobic005G063700 Sobic005G063700 Sobic001G353250--Sobic005G063700 Sobic010G096300 Sobic010G096300 Sobic001G353250--Sobic010G096300 Sobic007G152600 Sobic007G152600 Sobic001G353250--Sobic007G152600 Sobic004G144700 Sobic004G144700 Sobic001G353250--Sobic004G144700 Sobic006G222300 Sobic006G222300 Sobic001G002100--Sobic006G222300 Sobic001G261496 Sobic001G261496 Sobic001G002100--Sobic001G261496 Sobic001G002100--Sobic001G353250 Sobic009G083500 Sobic009G083500 Sobic001G002100--Sobic009G083500 Sobic007G182200 Sobic007G182200 Sobic001G002100--Sobic007G182200 Sobic004G276300 Sobic004G276300 Sobic001G002100--Sobic004G276300 Sobic009G209200 Sobic009G209200 Sobic001G002100--Sobic009G209200 Sobic007G110700 Sobic007G110700 Sobic001G002100--Sobic007G110700 Sobic007G011600 Sobic007G011600 Sobic001G002100--Sobic007G011600 Sobic007G213700--Sobic007G204900 Sobic002G000700 Sobic002G000700 Sobic007G213700--Sobic002G000700 Sobic003G305000 Sobic003G305000 Sobic007G213700--Sobic003G305000 Sobic004G201700 Sobic004G201700 Sobic007G213700--Sobic004G201700 Sobic006G249050 Sobic006G249050 Sobic007G213700--Sobic006G249050 Sobic004G122200 Sobic004G122200 Sobic007G213700--Sobic004G122200 Sobic001G003200 Sobic001G003200 Sobic007G213700--Sobic001G003200 Sobic006G135100 Sobic006G135100 Sobic007G213700--Sobic006G135100 Sobic001G158900 Sobic001G158900 Sobic007G213700--Sobic001G158900 Sobic007G152101 Sobic007G152101 Sobic006G172900--Sobic007G152101 Sobic004G113800 Sobic004G113800 Sobic006G172900--Sobic004G113800 Sobic003G308700 Sobic003G308700 Sobic006G172900--Sobic003G308700 Sobic010G214000 Sobic010G214000 Sobic006G172900--Sobic010G214000 Sobic001G053900 Sobic001G053900 Sobic006G172900--Sobic001G053900 Sobic008G152200 Sobic008G152200 Sobic006G172900--Sobic008G152200 Sobic008G175800 Sobic008G175800 Sobic006G172900--Sobic008G175800 Sobic009G232700 Sobic009G232700 Sobic006G172900--Sobic009G232700 Sobic006G043901 Sobic006G043901 Sobic006G172900--Sobic006G043901 Sobic004G001300 Sobic004G001300 Sobic001G118100--Sobic004G001300 Sobic006G225200 Sobic006G225200 Sobic001G118100--Sobic006G225200 Sobic005G036600 Sobic005G036600 Sobic001G118100--Sobic005G036600 Sobic009G140500 Sobic009G140500 Sobic001G118100--Sobic009G140500 Sobic001G118100--Sobic004G113800 Sobic001G484800 Sobic001G484800 Sobic001G118100--Sobic001G484800 Sobic002G291700 Sobic002G291700 Sobic001G118100--Sobic002G291700 Sobic007G052900 Sobic007G052900 Sobic001G118100--Sobic007G052900 Sobic004G065650 Sobic004G065650 Sobic001G118100--Sobic004G065650 Sobic007G204900--Sobic004G001300 Sobic007G204900--Sobic007G213700 Sobic008G011200 Sobic008G011200 Sobic007G204900--Sobic008G011200 Sobic007G204900--Sobic003G305000 Sobic007G204900--Sobic010G096300 Sobic003G068800 Sobic003G068800 Sobic007G204900--Sobic003G068800 Sobic007G204900--Sobic006G249050 Sobic001G065600 Sobic001G065600 Sobic007G204900--Sobic001G065600 Sobic001G098301 Sobic001G098301 Sobic007G204900--Sobic001G098301 Sobic005G063700--Sobic007G052900 Sobic002G209600 Sobic002G209600 Sobic005G063700--Sobic002G209600 Sobic001G497200 Sobic001G497200 Sobic005G063700--Sobic001G497200 Sobic007G225800 Sobic007G225800 Sobic005G063700--Sobic007G225800 Sobic008G105900 Sobic008G105900 Sobic005G063700--Sobic008G105900 Sobic003G390400 Sobic003G390400 Sobic005G063700--Sobic003G390400 Sobic006G060200 Sobic006G060200 Sobic005G063700--Sobic006G060200 Sobic001G269300 Sobic001G269300 Sobic005G063700--Sobic001G269300 Sobic005G063700--Sobic002G000700 Sobic006G103400 Sobic006G103400 Sobic010G096300--Sobic006G103400 Sobic004G227200 Sobic004G227200 Sobic010G096300--Sobic004G227200 Sobic006G093900 Sobic006G093900 Sobic010G096300--Sobic006G093900 Sobic001G233400 Sobic001G233400 Sobic010G096300--Sobic001G233400 Sobic003G435800 Sobic003G435800 Sobic010G096300--Sobic003G435800 Sobic007G223500 Sobic007G223500 Sobic010G096300--Sobic007G223500 Sobic001G035800 Sobic001G035800 Sobic010G096300--Sobic001G035800 Sobic001G069000 Sobic001G069000 Sobic010G096300--Sobic001G069000 Sobic009G164300 Sobic009G164300 Sobic010G096300--Sobic009G164300 Sobic007G152600--Sobic003G305000 Sobic007G152600--Sobic001G065600 Sobic003G110700 Sobic003G110700 Sobic007G152600--Sobic003G110700 Sobic003G443500 Sobic003G443500 Sobic007G152600--Sobic003G443500 Sobic007G152600--Sobic004G001300 Sobic002G293000 Sobic002G293000 Sobic007G152600--Sobic002G293000 Sobic006G101500 Sobic006G101500 Sobic007G152600--Sobic006G101500 Sobic005G188600 Sobic005G188600 Sobic007G152600--Sobic005G188600 Sobic002G036000 Sobic002G036000 Sobic007G152600--Sobic002G036000 Sobic008G015100 Sobic008G015100 Sobic004G144700--Sobic008G015100 Sobic005G055900 Sobic005G055900 Sobic004G144700--Sobic005G055900 Sobic008G060150 Sobic008G060150 Sobic004G144700--Sobic008G060150 Sobic003G163700 Sobic003G163700 Sobic004G144700--Sobic003G163700 Sobic001G066600 Sobic001G066600 Sobic004G144700--Sobic001G066600 Sobic009G171300 Sobic009G171300 Sobic004G144700--Sobic009G171300 Sobic001G435500 Sobic001G435500 Sobic004G144700--Sobic001G435500 Sobic010G189300 Sobic010G189300 Sobic004G144700--Sobic010G189300 Sobic003G088800 Sobic003G088800 Sobic004G144700--Sobic003G088800
Octagon: transcription factors


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