Gene annotation
Transcriptome id Sobic.001G354700.1
Synonym KCS12, Sb01g033910
Functional annotation 3-ketoacyl-CoA synthase, putative, expressed
UniProt A0A1B6QMX1
Pfam PF08541 PF08392
Panther DB PTHR31561 PTHR31561:SF7
NCBI CDD -
KEGG Orthology K15397; 3-ketoacyl-CoA synthase
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups GO:0008610lipid biosynthetic process GO:0016020membrane GO:0006633fatty acid biosynthetic process


Orthologs (automatic annotation)
TAIR AT2G28630 : 3-ketoacyl-CoA synthase 12
RAP-DB (Rice) LOC_Os03g26530.1 : 3-ketoacyl-CoA synthase, putative, expressed
MaizeGDB (Corn) Zm00025a052078 , Zm00025a002682 , Zm00025a022565
Brachypodium KQK21480
Barley HORVU7Hr1G018420.1 , HORVU6Hr1G089750.2 , HORVU6Hr1G089750.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G307700 cyclin-dependent kinase inhibitor, putative, expressed -
2 Sobic.003G396300 PPR repeat containing protein, expressed -
3 Sobic.008G081150 - -
4 Sobic.002G228600 gibberellin receptor GID1L2, putative, expressed -
5 Sobic.001G361900 ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
6 Sobic.007G071000 no apical meristem protein, putative, expressed -
7 Sobic.005G076650 - -
8 Sobic.004G345600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA10 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
9 Sobic.001G199900 expressed protein -
10 Sobic.009G029500 cation efflux family protein, putative, expressed K14689: SLC30A2, solute carrier family 30 (zinc transporter), member 2
11 Sobic.009G145900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PB1 domain containing protein, expressed -
12 Sobic.006G122900 expressed protein K15360: STRA13, CENPX, centromere protein X
13 Sobic.007G158100 expressed protein -
14 Sobic.008G152200 DC1 domain-containing protein, putative, expressed -
15 Sobic.004G291700 CPuORF25 - conserved peptide uORF-containing transcript, expressed K05929: E2.1.1.103, phosphoethanolamine N-methyltransferase
16 Sobic.001G136600 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
17 Sobic.001G310800 lectin-like receptor kinase, putative, expressed -
18 Sobic.004G134500 expressed protein -
19 Sobic.009G125600 NLI interacting factor-like phosphatase, putative, expressed K18999: RNA polymerase II C-terminal domain phosphatase-like 3/4
20 Sobic.006G216900 expressed protein -


Gene co-expression network
sample Sobic001G354700 Sobic001G354700 Sobic004G307700 Sobic004G307700 Sobic001G354700--Sobic004G307700 Sobic003G396300 Sobic003G396300 Sobic001G354700--Sobic003G396300 Sobic008G081150 Sobic008G081150 Sobic001G354700--Sobic008G081150 Sobic002G228600 Sobic002G228600 Sobic001G354700--Sobic002G228600 Sobic001G361900 Sobic001G361900 Sobic001G354700--Sobic001G361900 Sobic007G071000 Sobic007G071000 Sobic001G354700--Sobic007G071000 Sobic005G076650 Sobic005G076650 Sobic001G354700--Sobic005G076650 Sobic004G345600 Sobic004G345600 Sobic001G354700--Sobic004G345600 Sobic001G199900 Sobic001G199900 Sobic001G354700--Sobic001G199900 Sobic001G020500 Sobic001G020500 Sobic004G307700--Sobic001G020500 Sobic002G046700 Sobic002G046700 Sobic004G307700--Sobic002G046700 Sobic006G122900 Sobic006G122900 Sobic004G307700--Sobic006G122900 Sobic010G136900 Sobic010G136900 Sobic004G307700--Sobic010G136900 Sobic002G293900 Sobic002G293900 Sobic004G307700--Sobic002G293900 Sobic007G124000 Sobic007G124000 Sobic004G307700--Sobic007G124000 Sobic008G147101 Sobic008G147101 Sobic004G307700--Sobic008G147101 Sobic010G108500 Sobic010G108500 Sobic004G307700--Sobic010G108500 Sobic004G033900 Sobic004G033900 Sobic004G307700--Sobic004G033900 Sobic003G396300--Sobic008G081150 Sobic003G396300--Sobic006G122900 Sobic004G359200 Sobic004G359200 Sobic003G396300--Sobic004G359200 Sobic010G098400 Sobic010G098400 Sobic003G396300--Sobic010G098400 Sobic004G123300 Sobic004G123300 Sobic003G396300--Sobic004G123300 Sobic001G345000 Sobic001G345000 Sobic003G396300--Sobic001G345000 Sobic001G381900 Sobic001G381900 Sobic003G396300--Sobic001G381900 Sobic009G125600 Sobic009G125600 Sobic003G396300--Sobic009G125600 Sobic003G019000 Sobic003G019000 Sobic003G396300--Sobic003G019000 Sobic008G081150--Sobic003G396300 Sobic009G094800 Sobic009G094800 Sobic008G081150--Sobic009G094800 Sobic008G152200 Sobic008G152200 Sobic008G081150--Sobic008G152200 Sobic007G222900 Sobic007G222900 Sobic008G081150--Sobic007G222900 Sobic008G081150--Sobic007G071000 Sobic004G010101 Sobic004G010101 Sobic008G081150--Sobic004G010101 Sobic008G081150--Sobic006G122900 Sobic009G205600 Sobic009G205600 Sobic008G081150--Sobic009G205600 Sobic004G096300 Sobic004G096300 Sobic008G081150--Sobic004G096300 Sobic001G136600 Sobic001G136600 Sobic002G228600--Sobic001G136600 Sobic001G072900 Sobic001G072900 Sobic002G228600--Sobic001G072900 Sobic009G228300 Sobic009G228300 Sobic002G228600--Sobic009G228300 Sobic001G312700 Sobic001G312700 Sobic002G228600--Sobic001G312700 Sobic004G076850 Sobic004G076850 Sobic002G228600--Sobic004G076850 Sobic002G138300 Sobic002G138300 Sobic002G228600--Sobic002G138300 Sobic002G228600--Sobic001G199900 Sobic005G034600 Sobic005G034600 Sobic002G228600--Sobic005G034600 Sobic009G243900 Sobic009G243900 Sobic002G228600--Sobic009G243900 Sobic010G092100 Sobic010G092100 Sobic001G361900--Sobic010G092100 Sobic001G038500 Sobic001G038500 Sobic001G361900--Sobic001G038500 Sobic007G159800 Sobic007G159800 Sobic001G361900--Sobic007G159800 Sobic006G204200 Sobic006G204200 Sobic001G361900--Sobic006G204200 Sobic002G104000 Sobic002G104000 Sobic001G361900--Sobic002G104000 Sobic008G163700 Sobic008G163700 Sobic001G361900--Sobic008G163700 Sobic001G217700 Sobic001G217700 Sobic001G361900--Sobic001G217700 Sobic005G036700 Sobic005G036700 Sobic001G361900--Sobic005G036700 Sobic004G315800 Sobic004G315800 Sobic001G361900--Sobic004G315800 Sobic007G071000--Sobic008G152200 Sobic001G377000 Sobic001G377000 Sobic007G071000--Sobic001G377000 Sobic007G071000--Sobic004G096300 Sobic003G264901 Sobic003G264901 Sobic007G071000--Sobic003G264901 Sobic010G172200 Sobic010G172200 Sobic007G071000--Sobic010G172200 Sobic001G293800 Sobic001G293800 Sobic007G071000--Sobic001G293800 Sobic003G153800 Sobic003G153800 Sobic007G071000--Sobic003G153800 Sobic007G071000--Sobic009G205600 Sobic001G053900 Sobic001G053900 Sobic007G071000--Sobic001G053900 Sobic008G098098 Sobic008G098098 Sobic005G076650--Sobic008G098098 Sobic007G016000 Sobic007G016000 Sobic005G076650--Sobic007G016000 Sobic009G088401 Sobic009G088401 Sobic005G076650--Sobic009G088401 Sobic004G043200 Sobic004G043200 Sobic005G076650--Sobic004G043200 Sobic007G072400 Sobic007G072400 Sobic005G076650--Sobic007G072400 Sobic010G152700 Sobic010G152700 Sobic005G076650--Sobic010G152700 Sobic008G119200 Sobic008G119200 Sobic005G076650--Sobic008G119200 Sobic001G516200 Sobic001G516200 Sobic005G076650--Sobic001G516200 Sobic006G273500 Sobic006G273500 Sobic005G076650--Sobic006G273500 Sobic007G076700 Sobic007G076700 Sobic004G345600--Sobic007G076700 Sobic009G212700 Sobic009G212700 Sobic004G345600--Sobic009G212700 Sobic006G166500 Sobic006G166500 Sobic004G345600--Sobic006G166500 Sobic003G163100 Sobic003G163100 Sobic004G345600--Sobic003G163100 Sobic004G142700 Sobic004G142700 Sobic004G345600--Sobic004G142700 Sobic006G210100 Sobic006G210100 Sobic004G345600--Sobic006G210100 Sobic007G052900 Sobic007G052900 Sobic004G345600--Sobic007G052900 Sobic003G254000 Sobic003G254000 Sobic004G345600--Sobic003G254000 Sobic002G181132 Sobic002G181132 Sobic004G345600--Sobic002G181132 Sobic004G134500 Sobic004G134500 Sobic001G199900--Sobic004G134500 Sobic003G037900 Sobic003G037900 Sobic001G199900--Sobic003G037900 Sobic001G199900--Sobic004G307700 Sobic001G199900--Sobic006G122900 Sobic007G222800 Sobic007G222800 Sobic001G199900--Sobic007G222800 Sobic002G287500 Sobic002G287500 Sobic001G199900--Sobic002G287500 Sobic005G033300 Sobic005G033300 Sobic001G199900--Sobic005G033300 Sobic001G199900--Sobic002G228600 Sobic001G199900--Sobic005G076650
Octagon: transcription factors


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