Gene annotation
Transcriptome id Sobic.002G228600.1
Synonym
Functional annotation gibberellin receptor GID1L2, putative, expressed
UniProt C5X2C9
Pfam PF00135
Panther DB PTHR23024 PTHR23024:SF191
NCBI CDD KOG1515; Arylacetamide deacetylase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G19190 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os08g37060.1 : gibberellin receptor GID1L2, putative, expressed
MaizeGDB (Corn) Zm00025a047296
Brachypodium KQJ90541
Barley -
Wheat TraesCS4A02G183300 , TraesCS4A02G183300 , TraesCS5D02G249700 , TraesCS5D02G249700 , TraesCS4D02G130000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G136600 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
2 Sobic.001G072900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
3 Sobic.009G228300 50S ribosomal protein L21, chloroplast precursor, putative, expressed K02888: RP-L21, MRPL21, large subunit ribosomal protein L21
4 Sobic.001G312700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@selenium-binding protein-like, putative, expressed -
5 Sobic.004G076850 - -
6 Sobic.002G138300 expressed protein -
7 Sobic.001G199900 expressed protein -
8 Sobic.005G034600 expressed protein -
9 Sobic.009G243900 hhH-GPD superfamily base excision DNA repair protein, putative, expressed K01247: DNA-3-methyladenine glycosylase II
10 Sobic.007G157500 gibberellin receptor GID1L2, putative, expressed -
11 Sobic.004G172600 tetratricopeptide repeat containing protein, putative, expressed -
12 Sobic.001G461200 DUF538 domain containing protein, putative, expressed -
13 Sobic.002G264900 RNA recognition motif containing protein, putative, expressed -
14 Sobic.006G077600 phosphatidylinositol N-acetylglucosaminyltransferase subunit P, putative, expressed K03861: PIGP, GPI19, phosphatidylinositol N-acetylglucosaminyltransferase subunit P
15 Sobic.007G164300 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@rotamase("PubMedID : 26759170,PubMedID : 24597475")@peptidyl-prolyl cis-trans isomerase, putative, expressed -
16 Sobic.001G354700 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
17 Sobic.001G487000 expressed protein -
18 Sobic.006G157800 glycosyl transferase 8 domain containing protein, putative, expressed -
19 Sobic.001G267500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat containing protein, expressed -
20 Sobic.001G171500 presenilin, putative, expressed K04505: PSEN1, presenilin 1


Gene co-expression network
sample Sobic002G228600 Sobic002G228600 Sobic001G136600 Sobic001G136600 Sobic002G228600--Sobic001G136600 Sobic001G072900 Sobic001G072900 Sobic002G228600--Sobic001G072900 Sobic009G228300 Sobic009G228300 Sobic002G228600--Sobic009G228300 Sobic001G312700 Sobic001G312700 Sobic002G228600--Sobic001G312700 Sobic004G076850 Sobic004G076850 Sobic002G228600--Sobic004G076850 Sobic002G138300 Sobic002G138300 Sobic002G228600--Sobic002G138300 Sobic001G199900 Sobic001G199900 Sobic002G228600--Sobic001G199900 Sobic005G034600 Sobic005G034600 Sobic002G228600--Sobic005G034600 Sobic009G243900 Sobic009G243900 Sobic002G228600--Sobic009G243900 Sobic004G122900 Sobic004G122900 Sobic001G136600--Sobic004G122900 Sobic009G102000 Sobic009G102000 Sobic001G136600--Sobic009G102000 Sobic005G009100 Sobic005G009100 Sobic001G136600--Sobic005G009100 Sobic001G521700 Sobic001G521700 Sobic001G136600--Sobic001G521700 Sobic009G162100 Sobic009G162100 Sobic001G136600--Sobic009G162100 Sobic006G103700 Sobic006G103700 Sobic001G136600--Sobic006G103700 Sobic002G203600 Sobic002G203600 Sobic001G136600--Sobic002G203600 Sobic005G025300 Sobic005G025300 Sobic001G136600--Sobic005G025300 Sobic009G156100 Sobic009G156100 Sobic001G136600--Sobic009G156100 Sobic001G267500 Sobic001G267500 Sobic001G072900--Sobic001G267500 Sobic001G487000 Sobic001G487000 Sobic001G072900--Sobic001G487000 Sobic006G077600 Sobic006G077600 Sobic001G072900--Sobic006G077600 Sobic002G363700 Sobic002G363700 Sobic001G072900--Sobic002G363700 Sobic003G377200 Sobic003G377200 Sobic001G072900--Sobic003G377200 Sobic001G541601 Sobic001G541601 Sobic001G072900--Sobic001G541601 Sobic007G208500 Sobic007G208500 Sobic001G072900--Sobic007G208500 Sobic006G278900 Sobic006G278900 Sobic001G072900--Sobic006G278900 Sobic001G072900--Sobic009G228300 Sobic009G228300--Sobic001G072900 Sobic004G172600 Sobic004G172600 Sobic009G228300--Sobic004G172600 Sobic009G228300--Sobic005G034600 Sobic003G054100 Sobic003G054100 Sobic009G228300--Sobic003G054100 Sobic009G228300--Sobic001G267500 Sobic009G228300--Sobic001G312700 Sobic010G018900 Sobic010G018900 Sobic009G228300--Sobic010G018900 Sobic007G130000 Sobic007G130000 Sobic009G228300--Sobic007G130000 Sobic009G228300--Sobic004G076850 Sobic001G312700--Sobic007G130000 Sobic001G312700--Sobic001G267500 Sobic001G312700--Sobic003G377200 Sobic006G157800 Sobic006G157800 Sobic001G312700--Sobic006G157800 Sobic001G312700--Sobic001G072900 Sobic008G020500 Sobic008G020500 Sobic001G312700--Sobic008G020500 Sobic004G043200 Sobic004G043200 Sobic001G312700--Sobic004G043200 Sobic006G163650 Sobic006G163650 Sobic001G312700--Sobic006G163650 Sobic002G264900 Sobic002G264900 Sobic001G312700--Sobic002G264900 Sobic004G076850--Sobic006G077600 Sobic004G076850--Sobic002G264900 Sobic004G076850--Sobic001G267500 Sobic004G270200 Sobic004G270200 Sobic004G076850--Sobic004G270200 Sobic004G204000 Sobic004G204000 Sobic004G076850--Sobic004G204000 Sobic004G076850--Sobic001G072900 Sobic005G123400 Sobic005G123400 Sobic004G076850--Sobic005G123400 Sobic002G313100 Sobic002G313100 Sobic004G076850--Sobic002G313100 Sobic002G380700 Sobic002G380700 Sobic004G076850--Sobic002G380700 Sobic001G032200 Sobic001G032200 Sobic002G138300--Sobic001G032200 Sobic006G162400 Sobic006G162400 Sobic002G138300--Sobic006G162400 Sobic009G260700 Sobic009G260700 Sobic002G138300--Sobic009G260700 Sobic006G000900 Sobic006G000900 Sobic002G138300--Sobic006G000900 Sobic006G170900 Sobic006G170900 Sobic002G138300--Sobic006G170900 Sobic002G138300--Sobic006G103700 Sobic010G274800 Sobic010G274800 Sobic002G138300--Sobic010G274800 Sobic004G162500 Sobic004G162500 Sobic002G138300--Sobic004G162500 Sobic003G044300 Sobic003G044300 Sobic002G138300--Sobic003G044300 Sobic004G134500 Sobic004G134500 Sobic001G199900--Sobic004G134500 Sobic003G037900 Sobic003G037900 Sobic001G199900--Sobic003G037900 Sobic004G307700 Sobic004G307700 Sobic001G199900--Sobic004G307700 Sobic006G122900 Sobic006G122900 Sobic001G199900--Sobic006G122900 Sobic007G222800 Sobic007G222800 Sobic001G199900--Sobic007G222800 Sobic002G287500 Sobic002G287500 Sobic001G199900--Sobic002G287500 Sobic005G033300 Sobic005G033300 Sobic001G199900--Sobic005G033300 Sobic001G199900--Sobic002G228600 Sobic005G076650 Sobic005G076650 Sobic001G199900--Sobic005G076650 Sobic007G164300 Sobic007G164300 Sobic005G034600--Sobic007G164300 Sobic002G219800 Sobic002G219800 Sobic005G034600--Sobic002G219800 Sobic005G034600--Sobic009G228300 Sobic005G034600--Sobic001G072900 Sobic004G043600 Sobic004G043600 Sobic005G034600--Sobic004G043600 Sobic005G034600--Sobic004G172600 Sobic002G332100 Sobic002G332100 Sobic005G034600--Sobic002G332100 Sobic001G436100 Sobic001G436100 Sobic005G034600--Sobic001G436100 Sobic010G277000 Sobic010G277000 Sobic005G034600--Sobic010G277000 Sobic003G274200 Sobic003G274200 Sobic009G243900--Sobic003G274200 Sobic003G167000 Sobic003G167000 Sobic009G243900--Sobic003G167000 Sobic006G153200 Sobic006G153200 Sobic009G243900--Sobic006G153200 Sobic002G217500 Sobic002G217500 Sobic009G243900--Sobic002G217500 Sobic003G260600 Sobic003G260600 Sobic009G243900--Sobic003G260600 Sobic008G132200 Sobic008G132200 Sobic009G243900--Sobic008G132200 Sobic001G543400 Sobic001G543400 Sobic009G243900--Sobic001G543400 Sobic009G243900--Sobic004G172600 Sobic002G420600 Sobic002G420600 Sobic009G243900--Sobic002G420600
Octagon: transcription factors


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