Gene annotation
Transcriptome id Sobic.004G345600.2,Sobic.004G345600.1
Synonym auxin/indole-3-acetic acid (Aux/IAA), IAA13, Sb04g037260, SbIAA14
Functional annotation "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments" (PubMedID : 20499123)
OsIAA10 - Auxin-responsive Aux/IAA gene family member, expressed
UniProt C5XVX0 , A0A194YSY9
Pfam PF02309
Panther DB PTHR31734 PTHR31734:SF6
NCBI CDD -
KEGG Orthology K14484; auxin-responsive protein IAA
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT2G33310 : auxin-induced protein 13
RAP-DB (Rice) LOC_Os02g57250.1,LOC_Os02g57250.2 : OsIAA10 - Auxin-responsive Aux/IAA gene family member, expressed
MaizeGDB (Corn) Zm00025a032800
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G076700 coproporphyrinogen III oxidase, chloroplast precursor, putative, expressed K00228: CPOX, coproporphyrinogen III oxidase
2 Sobic.009G212700 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
3 Sobic.006G166500 expressed protein -
4 Sobic.003G163100 expressed protein K08819: cyclin-dependent kinase 12/13
5 Sobic.004G142700 PPR repeat domain containing protein, putative, expressed -
6 Sobic.006G210100 zinc finger domain, LSD1 subclass family protein, expressed -
7 Sobic.007G052900 acetyltransferase, GNAT family, putative, expressed -
8 Sobic.003G254000 PPR repeat domain containing protein, putative, expressed -
9 Sobic.002G181132 - -
10 Sobic.009G085100 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA3 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
11 Sobic.001G035900 expressed protein K13156: U11/U12 small nuclear ribonucleoprotein 48 kDa protein
12 Sobic.006G085300 Regulator of chromosome condensation domain containing protein, expressed -
13 Sobic.003G040000 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
14 Sobic.003G383300 RNA polymerase III RPC4 domain containing protein, expressed K03026: RPC4, DNA-directed RNA polymerase III subunit RPC4
15 Sobic.004G035000 S-adenosyl-L-methionine-dependent methyltransferase mraW, putative, expressed -
16 Sobic.007G037900 oxidoreductase family, NAD-binding Rossmann fold containing protein, expressed -
17 Sobic.004G241500 expressed protein -
18 Sobic.007G099100 - -
19 Sobic.002G144933 - -
20 Sobic.009G029500 cation efflux family protein, putative, expressed K14689: SLC30A2, solute carrier family 30 (zinc transporter), member 2


Gene co-expression network
sample Sobic004G345600 Sobic004G345600 Sobic007G076700 Sobic007G076700 Sobic004G345600--Sobic007G076700 Sobic009G212700 Sobic009G212700 Sobic004G345600--Sobic009G212700 Sobic006G166500 Sobic006G166500 Sobic004G345600--Sobic006G166500 Sobic003G163100 Sobic003G163100 Sobic004G345600--Sobic003G163100 Sobic004G142700 Sobic004G142700 Sobic004G345600--Sobic004G142700 Sobic006G210100 Sobic006G210100 Sobic004G345600--Sobic006G210100 Sobic007G052900 Sobic007G052900 Sobic004G345600--Sobic007G052900 Sobic003G254000 Sobic003G254000 Sobic004G345600--Sobic003G254000 Sobic002G181132 Sobic002G181132 Sobic004G345600--Sobic002G181132 Sobic004G035000 Sobic004G035000 Sobic007G076700--Sobic004G035000 Sobic001G031300 Sobic001G031300 Sobic007G076700--Sobic001G031300 Sobic002G209600 Sobic002G209600 Sobic007G076700--Sobic002G209600 Sobic003G040000 Sobic003G040000 Sobic007G076700--Sobic003G040000 Sobic009G127400 Sobic009G127400 Sobic007G076700--Sobic009G127400 Sobic007G076700--Sobic004G142700 Sobic003G112700 Sobic003G112700 Sobic007G076700--Sobic003G112700 Sobic002G114700 Sobic002G114700 Sobic007G076700--Sobic002G114700 Sobic001G354501 Sobic001G354501 Sobic007G076700--Sobic001G354501 Sobic005G039500 Sobic005G039500 Sobic009G212700--Sobic005G039500 Sobic009G212700--Sobic004G035000 Sobic005G187200 Sobic005G187200 Sobic009G212700--Sobic005G187200 Sobic009G212700--Sobic007G052900 Sobic009G212700--Sobic004G142700 Sobic007G037900 Sobic007G037900 Sobic009G212700--Sobic007G037900 Sobic007G054000 Sobic007G054000 Sobic009G212700--Sobic007G054000 Sobic001G479500 Sobic001G479500 Sobic009G212700--Sobic001G479500 Sobic009G134500 Sobic009G134500 Sobic009G212700--Sobic009G134500 Sobic006G166500--Sobic002G181132 Sobic001G375000 Sobic001G375000 Sobic006G166500--Sobic001G375000 Sobic003G162800 Sobic003G162800 Sobic006G166500--Sobic003G162800 Sobic003G045300 Sobic003G045300 Sobic006G166500--Sobic003G045300 Sobic001G489800 Sobic001G489800 Sobic006G166500--Sobic001G489800 Sobic004G003900 Sobic004G003900 Sobic006G166500--Sobic004G003900 Sobic009G092900 Sobic009G092900 Sobic006G166500--Sobic009G092900 Sobic001G514100 Sobic001G514100 Sobic006G166500--Sobic001G514100 Sobic006G237100 Sobic006G237100 Sobic006G166500--Sobic006G237100 Sobic003G163100--Sobic006G210100 Sobic001G360900 Sobic001G360900 Sobic003G163100--Sobic001G360900 Sobic001G253200 Sobic001G253200 Sobic003G163100--Sobic001G253200 Sobic001G303675 Sobic001G303675 Sobic003G163100--Sobic001G303675 Sobic009G251300 Sobic009G251300 Sobic003G163100--Sobic009G251300 Sobic006G191400 Sobic006G191400 Sobic003G163100--Sobic006G191400 Sobic002G151600 Sobic002G151600 Sobic003G163100--Sobic002G151600 Sobic003G185250 Sobic003G185250 Sobic003G163100--Sobic003G185250 Sobic009G045700 Sobic009G045700 Sobic003G163100--Sobic009G045700 Sobic004G142700--Sobic004G035000 Sobic004G142700--Sobic007G076700 Sobic004G142700--Sobic009G212700 Sobic004G246800 Sobic004G246800 Sobic004G142700--Sobic004G246800 Sobic004G142700--Sobic003G254000 Sobic004G142700--Sobic001G354501 Sobic010G248600 Sobic010G248600 Sobic004G142700--Sobic010G248600 Sobic006G196000 Sobic006G196000 Sobic004G142700--Sobic006G196000 Sobic004G151900 Sobic004G151900 Sobic004G142700--Sobic004G151900 Sobic006G210100--Sobic003G163100 Sobic006G210100--Sobic001G360900 Sobic006G210100--Sobic001G303675 Sobic006G246900 Sobic006G246900 Sobic006G210100--Sobic006G246900 Sobic003G259901 Sobic003G259901 Sobic006G210100--Sobic003G259901 Sobic002G144933 Sobic002G144933 Sobic006G210100--Sobic002G144933 Sobic006G145000 Sobic006G145000 Sobic006G210100--Sobic006G145000 Sobic006G210100--Sobic002G151600 Sobic004G211400 Sobic004G211400 Sobic006G210100--Sobic004G211400 Sobic010G056200 Sobic010G056200 Sobic007G052900--Sobic010G056200 Sobic004G113800 Sobic004G113800 Sobic007G052900--Sobic004G113800 Sobic007G052900--Sobic002G209600 Sobic010G005600 Sobic010G005600 Sobic007G052900--Sobic010G005600 Sobic004G083700 Sobic004G083700 Sobic007G052900--Sobic004G083700 Sobic007G052900--Sobic007G054000 Sobic010G280100 Sobic010G280100 Sobic007G052900--Sobic010G280100 Sobic006G180432 Sobic006G180432 Sobic007G052900--Sobic006G180432 Sobic009G065100 Sobic009G065100 Sobic007G052900--Sobic009G065100 Sobic001G035900 Sobic001G035900 Sobic003G254000--Sobic001G035900 Sobic001G261573 Sobic001G261573 Sobic003G254000--Sobic001G261573 Sobic003G254000--Sobic004G035000 Sobic002G031400 Sobic002G031400 Sobic003G254000--Sobic002G031400 Sobic003G254000--Sobic005G039500 Sobic002G064750 Sobic002G064750 Sobic003G254000--Sobic002G064750 Sobic001G274200 Sobic001G274200 Sobic003G254000--Sobic001G274200 Sobic007G099100 Sobic007G099100 Sobic003G254000--Sobic007G099100 Sobic003G429650 Sobic003G429650 Sobic003G254000--Sobic003G429650 Sobic002G181132--Sobic006G166500 Sobic002G181132--Sobic003G045300 Sobic002G181132--Sobic004G003900 Sobic002G181132--Sobic001G375000 Sobic002G181132--Sobic003G162800 Sobic008G090900 Sobic008G090900 Sobic002G181132--Sobic008G090900 Sobic002G181132--Sobic009G092900 Sobic003G345900 Sobic003G345900 Sobic002G181132--Sobic003G345900 Sobic002G156100 Sobic002G156100 Sobic002G181132--Sobic002G156100
Octagon: transcription factors


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