Gene annotation
Transcriptome id Sobic.006G166500.2,Sobic.006G166500.1,Sobic.006G166500.3
Synonym Sb06g024240
Functional annotation expressed protein
UniProt A0A1Z5REY8 , C5YD42 , A0A1Z5REA9
Pfam -
Panther DB PTHR36025 PTHR36025:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G44760 : Domain of unknown function (DUF3598)
RAP-DB (Rice) LOC_Os04g46100.1 : expressed protein
MaizeGDB (Corn) Zm00025a056662
Brachypodium KQJ83896
Barley HORVU2Hr1G093420.2 , HORVU2Hr1G093420.3 , HORVU2Hr1G093420.1 , HORVU2Hr1G093400.1
Wheat TraesCS2A02G392400 , TraesCS2D02G390500 , TraesCS2D02G390500 , TraesCS2B02G410600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G181132 - -
2 Sobic.001G375000 OsClp5 - Putative Clp protease homologue, expressed -
3 Sobic.003G162800 expressed protein -
4 Sobic.003G045300 cobalt ion transporter, putative, expressed -
5 Sobic.001G489800 HNH endonuclease domain-containing protein, putative, expressed -
6 Sobic.004G003900 nitric oxide synthase 1, putative, expressed K13427: nitric-oxide synthase, plant
7 Sobic.009G092900 N-dimethylguanosine tRNA methyltransferase, putative, expressed K00555: TRMT1, tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase
8 Sobic.001G514100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.006G237100 amidase, putative, expressed K02433: gatA, aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A
10 Sobic.003G128400 OsClp1 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
11 Sobic.008G130900 ribosomal protein S6, putative, expressed -
12 Sobic.001G448600 GTP-binding protein, putative, expressed K03978: GTP-binding protein
13 Sobic.002G156100 phosphoglycerate mutase, putative, expressed -
14 Sobic.006G273400 pentatricopeptide repeat protein, putative, expressed -
15 Sobic.002G013700 PPR2, putative, expressed -
16 Sobic.005G022800 GTP binding protein, putative, expressed -
17 Sobic.001G281500 OsClp11 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
18 Sobic.001G010800 methionyl-tRNA synthetase, putative, expressed -
19 Sobic.003G310100 ABC transporter, ATP-binding protein, putative, expressed -
20 Sobic.001G099000 expressed protein -


Gene co-expression network
sample Sobic006G166500 Sobic006G166500 Sobic002G181132 Sobic002G181132 Sobic006G166500--Sobic002G181132 Sobic001G375000 Sobic001G375000 Sobic006G166500--Sobic001G375000 Sobic003G162800 Sobic003G162800 Sobic006G166500--Sobic003G162800 Sobic003G045300 Sobic003G045300 Sobic006G166500--Sobic003G045300 Sobic001G489800 Sobic001G489800 Sobic006G166500--Sobic001G489800 Sobic004G003900 Sobic004G003900 Sobic006G166500--Sobic004G003900 Sobic009G092900 Sobic009G092900 Sobic006G166500--Sobic009G092900 Sobic001G514100 Sobic001G514100 Sobic006G166500--Sobic001G514100 Sobic006G237100 Sobic006G237100 Sobic006G166500--Sobic006G237100 Sobic002G181132--Sobic006G166500 Sobic002G181132--Sobic003G045300 Sobic002G181132--Sobic004G003900 Sobic002G181132--Sobic001G375000 Sobic002G181132--Sobic003G162800 Sobic008G090900 Sobic008G090900 Sobic002G181132--Sobic008G090900 Sobic002G181132--Sobic009G092900 Sobic003G345900 Sobic003G345900 Sobic002G181132--Sobic003G345900 Sobic002G156100 Sobic002G156100 Sobic002G181132--Sobic002G156100 Sobic003G128400 Sobic003G128400 Sobic001G375000--Sobic003G128400 Sobic001G375000--Sobic003G162800 Sobic006G088000 Sobic006G088000 Sobic001G375000--Sobic006G088000 Sobic001G375000--Sobic004G003900 Sobic001G375000--Sobic003G045300 Sobic010G027200 Sobic010G027200 Sobic001G375000--Sobic010G027200 Sobic001G448600 Sobic001G448600 Sobic001G375000--Sobic001G448600 Sobic001G375000--Sobic006G237100 Sobic001G375000--Sobic002G156100 Sobic003G162800--Sobic001G375000 Sobic003G327200 Sobic003G327200 Sobic003G162800--Sobic003G327200 Sobic003G162800--Sobic002G156100 Sobic003G162800--Sobic003G345900 Sobic003G162800--Sobic002G181132 Sobic003G162800--Sobic004G003900 Sobic003G162800--Sobic003G045300 Sobic003G162800--Sobic001G514100 Sobic003G162800--Sobic010G027200 Sobic003G045300--Sobic003G128400 Sobic003G045300--Sobic001G375000 Sobic001G003900 Sobic001G003900 Sobic003G045300--Sobic001G003900 Sobic003G045300--Sobic002G181132 Sobic003G045300--Sobic009G092900 Sobic003G045300--Sobic004G003900 Sobic005G184300 Sobic005G184300 Sobic003G045300--Sobic005G184300 Sobic003G045300--Sobic003G162800 Sobic003G045300--Sobic008G090900 Sobic001G424300 Sobic001G424300 Sobic001G489800--Sobic001G424300 Sobic003G310100 Sobic003G310100 Sobic001G489800--Sobic003G310100 Sobic003G254600 Sobic003G254600 Sobic001G489800--Sobic003G254600 Sobic001G281500 Sobic001G281500 Sobic001G489800--Sobic001G281500 Sobic006G273400 Sobic006G273400 Sobic001G489800--Sobic006G273400 Sobic002G081500 Sobic002G081500 Sobic001G489800--Sobic002G081500 Sobic001G196200 Sobic001G196200 Sobic001G489800--Sobic001G196200 Sobic002G297400 Sobic002G297400 Sobic001G489800--Sobic002G297400 Sobic001G489800--Sobic003G128400 Sobic004G003900--Sobic001G375000 Sobic004G003900--Sobic008G090900 Sobic004G003900--Sobic003G128400 Sobic004G003900--Sobic009G092900 Sobic004G003900--Sobic002G181132 Sobic004G003900--Sobic003G045300 Sobic004G003900--Sobic003G162800 Sobic004G003900--Sobic006G088000 Sobic004G003900--Sobic001G003900 Sobic009G092900--Sobic004G003900 Sobic009G092900--Sobic008G090900 Sobic009G092900--Sobic003G045300 Sobic009G092900--Sobic002G181132 Sobic005G117300 Sobic005G117300 Sobic009G092900--Sobic005G117300 Sobic004G079800 Sobic004G079800 Sobic009G092900--Sobic004G079800 Sobic009G092900--Sobic003G128400 Sobic009G092900--Sobic001G375000 Sobic001G346600 Sobic001G346600 Sobic009G092900--Sobic001G346600 Sobic001G514100--Sobic003G162800 Sobic001G514100--Sobic001G281500 Sobic001G514100--Sobic003G327200 Sobic005G197300 Sobic005G197300 Sobic001G514100--Sobic005G197300 Sobic001G514100--Sobic001G375000 Sobic001G514100--Sobic003G128400 Sobic001G494500 Sobic001G494500 Sobic001G514100--Sobic001G494500 Sobic001G514100--Sobic002G297400 Sobic001G382800 Sobic001G382800 Sobic001G514100--Sobic001G382800 Sobic006G237100--Sobic001G281500 Sobic006G237100--Sobic010G027200 Sobic006G237100--Sobic001G375000 Sobic002G404900 Sobic002G404900 Sobic006G237100--Sobic002G404900 Sobic002G140000 Sobic002G140000 Sobic006G237100--Sobic002G140000 Sobic001G161400 Sobic001G161400 Sobic006G237100--Sobic001G161400 Sobic001G437200 Sobic001G437200 Sobic006G237100--Sobic001G437200 Sobic007G116100 Sobic007G116100 Sobic006G237100--Sobic007G116100 Sobic006G237100--Sobic003G310100
Octagon: transcription factors


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