Gene annotation
Transcriptome id Sobic.001G356700.1
Synonym Sb01g034080
Functional annotation ZOS9-11 - C2H2 zinc finger protein, expressed
UniProt C5WYM0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G01860 : C2H2 and C2HC zinc fingers superfamily protein
RAP-DB (Rice) LOC_Os09g26200.1 : ZOS9-11 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a047097 , Zm00025a047096 , Zm00025a047099 , Zm00025a047098 , Zm00025a011254 , Zm00025a004718 , Zm00025a056132 , Zm00025a013947 , Zm00025a013948 , Zm00025a052056
Brachypodium PNT61174 , KQK22874 , KQK11197
Barley HORVU4Hr1G087980.1 , HORVU4Hr1G084140.2 , HORVU4Hr1G084140.1 , HORVU2Hr1G077570.1 , HORVU5Hr1G103440.1 , HORVU4Hr1G083170.2 , HORVU4Hr1G083170.1 , HORVU0Hr1G038970.1 , HORVU0Hr1G038970.2 , HORVU5Hr1G063390.1 , HORVU5Hr1G063390.2 , HORVU7Hr1G118500.1 , HORVU5Hr1G088860.1
Wheat TraesCS4A02G412000 , TraesCS4D02G337800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G225700 phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed K01626: E2.5.1.54, aroF, aroG, 3-deoxy-7-phosphoheptulonate synthase
2 Sobic.004G116300 expressed protein -
3 Sobic.005G102800 OsSCP48 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
4 Sobic.001G424400 similar to Putative uncharacterized protein(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Negative regulator of ABA(PubMedID : 30367619)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
5 Sobic.006G237600 expressed protein -
6 Sobic.010G147600 reticulon domain containing protein, putative, expressed -
7 Sobic.004G244200 expressed protein -
8 Sobic.004G197000 glycine-rich cell wall structural protein precursor, putative, expressed -
9 Sobic.002G256800 acyl-ACP thioesterase, putative, expressed K10782: fatty acyl-ACP thioesterase A
10 Sobic.004G222300 DEF7 - Defensin and Defensin-like DEFL family, expressed -
11 Sobic.001G164500 MYB family transcription factor, putative, expressed -
12 Sobic.004G115000 helix-loop-helix DNA-binding domain containing protein, expressed -
13 Sobic.006G088400 OsFBX135 - F-box domain containing protein, expressed -
14 Sobic.002G225000 remorin C-terminal domain containing protein, putative, expressed -
15 Sobic.008G039401 - -
16 Sobic.002G043500 aldehyde oxidase, putative, expressed K09842: abscisic-aldehyde oxidase
17 Sobic.003G333700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cysteine synthase, chloroplast precursor, putative, expressed K01738: cysteine synthase
18 Sobic.004G192500 protein kinase PKN/PRK1, effector, putative, expressed -
19 Sobic.003G165800 UDP-N-acetylglucosamine--N-acetylmuramyl-pyrophosphor yl-undecaprenol N-acetylglucosamine transferase, putative, expressed K02563: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
20 Sobic.002G189700 nucleobase-ascorbate transporter, putative, expressed -


Gene co-expression network
sample Sobic001G356700 Sobic001G356700 Sobic007G225700 Sobic007G225700 Sobic001G356700--Sobic007G225700 Sobic004G116300 Sobic004G116300 Sobic001G356700--Sobic004G116300 Sobic005G102800 Sobic005G102800 Sobic001G356700--Sobic005G102800 Sobic001G424400 Sobic001G424400 Sobic001G356700--Sobic001G424400 Sobic006G237600 Sobic006G237600 Sobic001G356700--Sobic006G237600 Sobic010G147600 Sobic010G147600 Sobic001G356700--Sobic010G147600 Sobic004G244200 Sobic004G244200 Sobic001G356700--Sobic004G244200 Sobic004G197000 Sobic004G197000 Sobic001G356700--Sobic004G197000 Sobic002G256800 Sobic002G256800 Sobic001G356700--Sobic002G256800 Sobic007G225700--Sobic002G256800 Sobic002G155100 Sobic002G155100 Sobic007G225700--Sobic002G155100 Sobic007G225700--Sobic005G102800 Sobic010G155600 Sobic010G155600 Sobic007G225700--Sobic010G155600 Sobic006G193500 Sobic006G193500 Sobic007G225700--Sobic006G193500 Sobic003G102700 Sobic003G102700 Sobic007G225700--Sobic003G102700 Sobic003G223000 Sobic003G223000 Sobic007G225700--Sobic003G223000 Sobic006G237000 Sobic006G237000 Sobic007G225700--Sobic006G237000 Sobic008G100400 Sobic008G100400 Sobic007G225700--Sobic008G100400 Sobic004G116300--Sobic001G424400 Sobic004G057900 Sobic004G057900 Sobic004G116300--Sobic004G057900 Sobic002G075800 Sobic002G075800 Sobic004G116300--Sobic002G075800 Sobic003G356000 Sobic003G356000 Sobic004G116300--Sobic003G356000 Sobic009G161800 Sobic009G161800 Sobic004G116300--Sobic009G161800 Sobic003G006866 Sobic003G006866 Sobic004G116300--Sobic003G006866 Sobic008G029300 Sobic008G029300 Sobic004G116300--Sobic008G029300 Sobic002G139100 Sobic002G139100 Sobic004G116300--Sobic002G139100 Sobic007G109700 Sobic007G109700 Sobic004G116300--Sobic007G109700 Sobic005G102800--Sobic003G102700 Sobic007G192200 Sobic007G192200 Sobic005G102800--Sobic007G192200 Sobic004G269100 Sobic004G269100 Sobic005G102800--Sobic004G269100 Sobic006G226000 Sobic006G226000 Sobic005G102800--Sobic006G226000 Sobic009G119800 Sobic009G119800 Sobic005G102800--Sobic009G119800 Sobic003G140800 Sobic003G140800 Sobic005G102800--Sobic003G140800 Sobic001G381000 Sobic001G381000 Sobic005G102800--Sobic001G381000 Sobic005G102800--Sobic004G244200 Sobic009G031800 Sobic009G031800 Sobic005G102800--Sobic009G031800 Sobic001G424400--Sobic004G116300 Sobic010G011900 Sobic010G011900 Sobic001G424400--Sobic010G011900 Sobic009G161900 Sobic009G161900 Sobic001G424400--Sobic009G161900 Sobic001G424400--Sobic010G147600 Sobic003G281800 Sobic003G281800 Sobic001G424400--Sobic003G281800 Sobic001G155300 Sobic001G155300 Sobic001G424400--Sobic001G155300 Sobic003G378000 Sobic003G378000 Sobic001G424400--Sobic003G378000 Sobic001G241600 Sobic001G241600 Sobic001G424400--Sobic001G241600 Sobic003G354000 Sobic003G354000 Sobic001G424400--Sobic003G354000 Sobic006G237600--Sobic004G244200 Sobic006G237600--Sobic008G100400 Sobic006G237600--Sobic007G225700 Sobic002G300100 Sobic002G300100 Sobic006G237600--Sobic002G300100 Sobic010G157700 Sobic010G157700 Sobic006G237600--Sobic010G157700 Sobic001G236800 Sobic001G236800 Sobic006G237600--Sobic001G236800 Sobic003G176200 Sobic003G176200 Sobic006G237600--Sobic003G176200 Sobic008G186500 Sobic008G186500 Sobic006G237600--Sobic008G186500 Sobic009G241966 Sobic009G241966 Sobic006G237600--Sobic009G241966 Sobic010G147600--Sobic009G161900 Sobic010G147600--Sobic001G424400 Sobic002G043500 Sobic002G043500 Sobic010G147600--Sobic002G043500 Sobic001G477700 Sobic001G477700 Sobic010G147600--Sobic001G477700 Sobic009G108700 Sobic009G108700 Sobic010G147600--Sobic009G108700 Sobic002G072600 Sobic002G072600 Sobic010G147600--Sobic002G072600 Sobic003G408300 Sobic003G408300 Sobic010G147600--Sobic003G408300 Sobic001G179900 Sobic001G179900 Sobic010G147600--Sobic001G179900 Sobic001G118700 Sobic001G118700 Sobic010G147600--Sobic001G118700 Sobic004G244200--Sobic005G102800 Sobic004G244200--Sobic006G237600 Sobic004G248700 Sobic004G248700 Sobic004G244200--Sobic004G248700 Sobic005G047900 Sobic005G047900 Sobic004G244200--Sobic005G047900 Sobic004G244200--Sobic009G119800 Sobic009G155900 Sobic009G155900 Sobic004G244200--Sobic009G155900 Sobic003G434300 Sobic003G434300 Sobic004G244200--Sobic003G434300 Sobic004G057700 Sobic004G057700 Sobic004G244200--Sobic004G057700 Sobic008G018100 Sobic008G018100 Sobic004G244200--Sobic008G018100 Sobic006G095900 Sobic006G095900 Sobic004G197000--Sobic006G095900 Sobic005G138000 Sobic005G138000 Sobic004G197000--Sobic005G138000 Sobic004G142400 Sobic004G142400 Sobic004G197000--Sobic004G142400 Sobic004G197000--Sobic008G018100 Sobic008G165300 Sobic008G165300 Sobic004G197000--Sobic008G165300 Sobic005G167650 Sobic005G167650 Sobic004G197000--Sobic005G167650 Sobic009G104500 Sobic009G104500 Sobic004G197000--Sobic009G104500 Sobic001G497700 Sobic001G497700 Sobic004G197000--Sobic001G497700 Sobic010G007800 Sobic010G007800 Sobic004G197000--Sobic010G007800 Sobic002G256800--Sobic007G225700 Sobic003G336500 Sobic003G336500 Sobic002G256800--Sobic003G336500 Sobic010G063566 Sobic010G063566 Sobic002G256800--Sobic010G063566 Sobic002G256800--Sobic002G155100 Sobic007G092200 Sobic007G092200 Sobic002G256800--Sobic007G092200 Sobic002G256800--Sobic008G100400 Sobic001G081900 Sobic001G081900 Sobic002G256800--Sobic001G081900 Sobic002G256800--Sobic003G408300 Sobic001G199500 Sobic001G199500 Sobic002G256800--Sobic001G199500
Octagon: transcription factors


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