Gene annotation
Transcriptome id Sobic.001G422850.12,Sobic.001G422850.5,Sobic.001G422850.7,Sobic.001G422850.13,Sobic.001G422850.2,Sobic.001G422850.8,Sobic.001G422850.11,Sobic.001G422850.10,Sobic.001G422850.9,Sobic.001G422850.3,Sobic.001G422850.4,Sobic.001G422850.6,Sobic.001G422850.1,Sobic.001G422850.14
Synonym -
Functional annotation -
UniProt A0A1Z5SAC1 , A0A1Z5SAH5 , A0A1Z5SA91 , A0A1Z5SAL3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G410200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.008G015700 major facilitator superfamily antiporter, putative, expressed -
3 Sobic.K009900 autophagy-related protein 8D, putative, expressed K08341: GABARAP, ATG8, GABA(A) receptor-associated protein
4 Sobic.001G287301 - -
5 Sobic.001G024200 lipase class 3 family protein, putative, expressed -
6 Sobic.005G139800 Brix domain containing protein, putative, expressed -
7 Sobic.002G115801 - -
8 Sobic.007G008800 VHS and GAT domain containing protein, expressed -
9 Sobic.001G272000 - -
10 Sobic.001G271801 - -
11 Sobic.004G076732 - K14800: pre-rRNA-processing protein TSR2
12 Sobic.008G049701 - -
13 Sobic.001G028600 expressed protein -
14 Sobic.008G042250 - -
15 Sobic.003G121400 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@expressed protein -
16 Sobic.002G166700 cyclin, putative, expressed -
17 Sobic.004G212800 - -
18 Sobic.009G209800 OsFBX49 - F-box domain containing protein, expressed -
19 Sobic.002G285200 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR53 - Auxin-responsive SAUR gene family member, expressed -
20 Sobic.002G166600 cyclin, putative, expressed -


Gene co-expression network
sample Sobic001G422850 Sobic001G422850 Sobic002G410200 Sobic002G410200 Sobic001G422850--Sobic002G410200 Sobic008G015700 Sobic008G015700 Sobic001G422850--Sobic008G015700 SobicK009900 SobicK009900 Sobic001G422850--SobicK009900 Sobic001G287301 Sobic001G287301 Sobic001G422850--Sobic001G287301 Sobic001G024200 Sobic001G024200 Sobic001G422850--Sobic001G024200 Sobic005G139800 Sobic005G139800 Sobic001G422850--Sobic005G139800 Sobic002G115801 Sobic002G115801 Sobic001G422850--Sobic002G115801 Sobic007G008800 Sobic007G008800 Sobic001G422850--Sobic007G008800 Sobic001G272000 Sobic001G272000 Sobic001G422850--Sobic001G272000 Sobic004G076732 Sobic004G076732 Sobic002G410200--Sobic004G076732 Sobic009G209800 Sobic009G209800 Sobic002G410200--Sobic009G209800 Sobic002G410200--SobicK009900 Sobic001G253100 Sobic001G253100 Sobic002G410200--Sobic001G253100 Sobic003G244800 Sobic003G244800 Sobic002G410200--Sobic003G244800 Sobic002G410200--Sobic005G139800 Sobic008G042250 Sobic008G042250 Sobic002G410200--Sobic008G042250 Sobic008G009500 Sobic008G009500 Sobic002G410200--Sobic008G009500 Sobic008G049701 Sobic008G049701 Sobic002G410200--Sobic008G049701 Sobic008G015700--SobicK009900 Sobic008G015700--Sobic005G139800 Sobic008G015700--Sobic002G410200 Sobic008G015700--Sobic007G008800 Sobic001G271801 Sobic001G271801 Sobic008G015700--Sobic001G271801 Sobic008G015700--Sobic001G272000 Sobic003G121400 Sobic003G121400 Sobic008G015700--Sobic003G121400 Sobic008G015700--Sobic001G287301 Sobic008G015700--Sobic008G049701 SobicK009900--Sobic004G076732 Sobic005G110430 Sobic005G110430 SobicK009900--Sobic005G110430 SobicK009900--Sobic001G253100 SobicK009900--Sobic008G042250 SobicK009900--Sobic008G049701 SobicK009900--Sobic002G410200 SobicK009900--Sobic001G287301 Sobic005G117801 Sobic005G117801 SobicK009900--Sobic005G117801 SobicK009900--Sobic009G209800 Sobic001G287301--Sobic008G049701 Sobic001G287301--Sobic008G042250 Sobic001G287301--Sobic005G139800 Sobic001G287301--Sobic005G110430 Sobic001G287301--Sobic009G209800 Sobic001G287301--SobicK009900 Sobic008G157950 Sobic008G157950 Sobic001G287301--Sobic008G157950 Sobic001G287301--Sobic001G253100 Sobic001G128800 Sobic001G128800 Sobic001G287301--Sobic001G128800 Sobic004G212800 Sobic004G212800 Sobic001G024200--Sobic004G212800 Sobic007G211000 Sobic007G211000 Sobic001G024200--Sobic007G211000 Sobic004G112500 Sobic004G112500 Sobic001G024200--Sobic004G112500 Sobic003G204000 Sobic003G204000 Sobic001G024200--Sobic003G204000 Sobic001G024200--Sobic001G272000 Sobic004G164600 Sobic004G164600 Sobic001G024200--Sobic004G164600 Sobic001G024200--SobicK009900 Sobic001G439500 Sobic001G439500 Sobic001G024200--Sobic001G439500 Sobic010G248200 Sobic010G248200 Sobic001G024200--Sobic010G248200 Sobic005G139800--Sobic008G049701 Sobic005G139800--Sobic009G209800 Sobic005G139800--Sobic001G287301 Sobic005G139800--Sobic008G042250 Sobic001G240400 Sobic001G240400 Sobic005G139800--Sobic001G240400 Sobic005G139800--Sobic005G117801 Sobic002G056100 Sobic002G056100 Sobic005G139800--Sobic002G056100 Sobic005G139800--Sobic002G410200 Sobic005G221425 Sobic005G221425 Sobic005G139800--Sobic005G221425 Sobic001G451000 Sobic001G451000 Sobic002G115801--Sobic001G451000 Sobic005G167300 Sobic005G167300 Sobic002G115801--Sobic005G167300 Sobic002G115801--Sobic001G287301 Sobic002G115801--SobicK009900 SobicK016900 SobicK016900 Sobic002G115801--SobicK016900 Sobic002G115801--Sobic003G244800 Sobic003G393300 Sobic003G393300 Sobic002G115801--Sobic003G393300 Sobic002G115801--Sobic007G211000 Sobic003G117000 Sobic003G117000 Sobic002G115801--Sobic003G117000 Sobic003G026300 Sobic003G026300 Sobic007G008800--Sobic003G026300 Sobic004G088400 Sobic004G088400 Sobic007G008800--Sobic004G088400 Sobic007G008800--SobicK009900 Sobic002G177400 Sobic002G177400 Sobic007G008800--Sobic002G177400 Sobic007G008800--Sobic004G076732 Sobic007G008800--Sobic002G410200 Sobic007G008800--Sobic001G024200 Sobic007G008800--Sobic005G139800 Sobic007G008800--Sobic001G271801 Sobic001G271900 Sobic001G271900 Sobic001G272000--Sobic001G271900 Sobic001G272000--SobicK009900 Sobic001G272000--Sobic001G287301 Sobic001G272000--Sobic001G024200 Sobic001G272000--Sobic008G049701 Sobic001G543900 Sobic001G543900 Sobic001G272000--Sobic001G543900 Sobic001G272000--Sobic008G042250 Sobic001G272000--Sobic007G211000 Sobic001G272000--Sobic005G110430
Octagon: transcription factors


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