Gene annotation
Transcriptome id Sobic.001G439900.1
Synonym Sb01g041360
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5WR09
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g13870.1 : expressed protein
MaizeGDB (Corn) Zm00025a052911
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G439900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G246400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyprenyl synthetase, putative, expressed K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
2 Sobic.006G188200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fatty acid hydroxylase, putative, expressed K15746: beta-carotene 3-hydroxylase
3 Sobic.003G304300 expressed protein -
4 Sobic.001G112900 expressed protein -
5 Sobic.002G161400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
6 Sobic.004G344600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
7 Sobic.003G339200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G029600 -(PubMedID : 26465154)@expressed protein -
9 Sobic.006G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
10 Sobic.007G065600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carotenoid synthesis regulator CarF, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant
11 Sobic.007G016600 expressed protein -
12 Sobic.003G340300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nodulin, putative, expressed -
13 Sobic.004G267700 hydrolase, alpha/beta fold family domain containing protein, expressed -
14 Sobic.003G380200 SNARE associated Golgi protein, putative, expressed -
15 Sobic.007G006200 NBS-LRR disease resistance protein, putative, expressed -
16 Sobic.004G128900 GTP-binding protein typA/bipA, putative, expressed K06207: typA, GTP-binding protein
17 Sobic.004G268400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
18 Sobic.009G250400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA polymerase sigma factor, putative, expressed K03093: RNA polymerase sigma factor
19 Sobic.003G186800 transporter, major facilitator family, putative, expressed -
20 Sobic.010G100900 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase


Gene co-expression network
sample Sobic001G439900 Sobic001G439900 Sobic009G246400 Sobic009G246400 Sobic001G439900--Sobic009G246400 Sobic006G188200 Sobic006G188200 Sobic001G439900--Sobic006G188200 Sobic003G304300 Sobic003G304300 Sobic001G439900--Sobic003G304300 Sobic001G112900 Sobic001G112900 Sobic001G439900--Sobic001G112900 Sobic002G161400 Sobic002G161400 Sobic001G439900--Sobic002G161400 Sobic004G344600 Sobic004G344600 Sobic001G439900--Sobic004G344600 Sobic003G339200 Sobic003G339200 Sobic001G439900--Sobic003G339200 Sobic001G029600 Sobic001G029600 Sobic001G439900--Sobic001G029600 Sobic006G191500 Sobic006G191500 Sobic001G439900--Sobic006G191500 Sobic009G246400--Sobic002G161400 Sobic009G246400--Sobic004G344600 Sobic009G246400--Sobic003G304300 Sobic009G246400--Sobic003G339200 Sobic004G128900 Sobic004G128900 Sobic009G246400--Sobic004G128900 Sobic009G246400--Sobic001G112900 Sobic009G246400--Sobic006G191500 Sobic010G113200 Sobic010G113200 Sobic009G246400--Sobic010G113200 Sobic010G100900 Sobic010G100900 Sobic009G246400--Sobic010G100900 Sobic006G188200--Sobic001G029600 Sobic009G250400 Sobic009G250400 Sobic006G188200--Sobic009G250400 Sobic001G485100 Sobic001G485100 Sobic006G188200--Sobic001G485100 Sobic006G188200--Sobic003G304300 Sobic007G065600 Sobic007G065600 Sobic006G188200--Sobic007G065600 Sobic006G188200--Sobic004G344600 Sobic004G267700 Sobic004G267700 Sobic006G188200--Sobic004G267700 Sobic003G186800 Sobic003G186800 Sobic006G188200--Sobic003G186800 Sobic006G188200--Sobic001G112900 Sobic003G304300--Sobic004G267700 Sobic003G304300--Sobic006G191500 Sobic002G351200 Sobic002G351200 Sobic003G304300--Sobic002G351200 Sobic003G304300--Sobic002G161400 Sobic003G304300--Sobic004G344600 Sobic003G304300--Sobic001G112900 Sobic003G304300--Sobic003G186800 Sobic003G380200 Sobic003G380200 Sobic003G304300--Sobic003G380200 Sobic004G268400 Sobic004G268400 Sobic003G304300--Sobic004G268400 Sobic001G112900--Sobic003G339200 Sobic001G112900--Sobic004G344600 Sobic001G112900--Sobic003G304300 Sobic001G112900--Sobic002G161400 Sobic001G112900--Sobic010G113200 Sobic005G002400 Sobic005G002400 Sobic001G112900--Sobic005G002400 Sobic001G112900--Sobic006G191500 Sobic003G162400 Sobic003G162400 Sobic001G112900--Sobic003G162400 Sobic010G104700 Sobic010G104700 Sobic001G112900--Sobic010G104700 Sobic002G161400--Sobic006G191500 Sobic002G161400--Sobic004G344600 Sobic002G161400--Sobic004G128900 Sobic002G161400--Sobic003G304300 Sobic002G161400--Sobic001G485100 Sobic004G153900 Sobic004G153900 Sobic002G161400--Sobic004G153900 Sobic002G161400--Sobic003G339200 Sobic002G161400--Sobic003G380200 Sobic002G161400--Sobic001G112900 Sobic004G344600--Sobic002G161400 Sobic004G344600--Sobic001G112900 Sobic004G344600--Sobic003G339200 Sobic004G344600--Sobic003G304300 Sobic004G344600--Sobic006G191500 Sobic004G344600--Sobic010G104700 Sobic004G344600--Sobic001G485100 Sobic004G344600--Sobic004G128900 Sobic004G344600--Sobic009G246400 Sobic003G339200--Sobic001G112900 Sobic003G339200--Sobic004G344600 Sobic003G339200--Sobic002G161400 Sobic003G339200--Sobic003G304300 Sobic003G339200--Sobic010G113200 Sobic003G339200--Sobic009G246400 Sobic003G339200--Sobic003G162400 Sobic003G339200--Sobic006G191500 Sobic003G339200--Sobic010G104700 Sobic006G140500 Sobic006G140500 Sobic001G029600--Sobic006G140500 Sobic004G202200 Sobic004G202200 Sobic001G029600--Sobic004G202200 Sobic001G029600--Sobic004G267700 Sobic009G119300 Sobic009G119300 Sobic001G029600--Sobic009G119300 Sobic001G029600--Sobic004G268400 Sobic008G088821 Sobic008G088821 Sobic001G029600--Sobic008G088821 Sobic001G029600--Sobic003G380200 Sobic009G133700 Sobic009G133700 Sobic001G029600--Sobic009G133700 Sobic001G015200 Sobic001G015200 Sobic001G029600--Sobic001G015200 Sobic006G191500--Sobic002G161400 Sobic006G191500--Sobic003G380200 Sobic006G191500--Sobic001G485100 Sobic006G191500--Sobic003G304300 Sobic006G191500--Sobic004G128900 Sobic006G191500--Sobic004G344600 Sobic006G191500--Sobic003G186800 Sobic006G191500--Sobic010G100900 Sobic001G046000 Sobic001G046000 Sobic006G191500--Sobic001G046000
Octagon: transcription factors


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